RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 SEC61GP60059 68 aa14.54□□□□□ -0.08
DDX41-202ENST00000503078 LCA10Q71F78 164 aa14.54□□□□□ -0.08
DDX41-202ENST00000503078 RTL8CO15255 209 aa14.53□□□□□ -0.08
DDX41-202ENST00000503078 SPAG11AQ6PDA7 123 aa14.53□□□□□ -0.08
DDX41-202ENST00000503078 HRES1P13985 223 aa14.53□□□□□ -0.08
DDX41-202ENST00000503078 PLAC8Q9NZF1 115 aa14.52□□□□□ -0.09
DDX41-202ENST00000503078 DNAH8Q96JB1 4490 aa14.5□□□□□ -0.09
DDX41-202ENST00000503078 PRKDCP78527 4128 aaKnown RBP14.49□□□□□ -0.09
DDX41-202ENST00000503078 ATP11AUNQ6ZP68 121 aa14.47□□□□□ -0.09
DDX41-202ENST00000503078 VPS13DQ5THJ4 4388 aa14.47□□□□□ -0.09
DDX41-202ENST00000503078 HECTD4Q9Y4D8 3996 aa14.46□□□□□ -0.09
DDX41-202ENST00000503078 SPTSSBQ8NFR3 76 aa14.46□□□□□ -0.09
DDX41-202ENST00000503078 MEGF8Q7Z7M0 2845 aa14.46□□□□□ -0.1
DDX41-202ENST00000503078 FRAS1Q86XX4 4008 aa14.44□□□□□ -0.1
DDX41-202ENST00000503078 SPINK6Q6UWN8 80 aa14.44□□□□□ -0.1
DDX41-202ENST00000503078 CDC42SE1Q9NRR8 79 aa14.44□□□□□ -0.1
DDX41-202ENST00000503078 Q5W150 140 aa14.41□□□□□ -0.1
DDX41-202ENST00000503078 STARD9Q9P2P6 4700 aa14.41□□□□□ -0.1
DDX41-202ENST00000503078 KRTAP13-3Q3SY46 172 aa14.4□□□□□ -0.1
DDX41-202ENST00000503078 IGLV7-43P04211 117 aa14.35□□□□□ -0.11
DDX41-202ENST00000503078 CIRBP-AS1Q8TBR5 109 aa14.35□□□□□ -0.11
DDX41-202ENST00000503078 DNAH17Q9UFH2 4485 aa14.35□□□□□ -0.11
DDX41-202ENST00000503078 KTN1-AS1Q86SY8 53 aa14.33□□□□□ -0.12
DDX41-202ENST00000503078 DNHD1Q96M86 4753 aa14.3□□□□□ -0.12
DDX41-202ENST00000503078 A6NN06 94 aa14.3□□□□□ -0.12
DDX41-202ENST00000503078 SPINK7P58062 85 aa14.3□□□□□ -0.12
DDX41-202ENST00000503078 C8orf87E5RJ46 101 aa14.29□□□□□ -0.12
DDX41-202ENST00000503078 PRR26Q8N8Z3 221 aa14.29□□□□□ -0.12
DDX41-202ENST00000503078 DNAH2Q9P225 4427 aa14.29□□□□□ -0.12
DDX41-202ENST00000503078 SSBP3-AS1Q7Z2R9 100 aa14.26□□□□□ -0.13
DDX41-202ENST00000503078 ACYP2P14621 99 aa14.25□□□□□ -0.13
DDX41-202ENST00000503078 KMT2AQ03164 3969 aa14.23□□□□□ -0.13
DDX41-202ENST00000503078 C1orf134Q5TEV5 83 aa14.18□□□□□ -0.14
DDX41-202ENST00000503078 LINC00313P59037 77 aa14.17□□□□□ -0.14
DDX41-202ENST00000503078 DMAC1Q96GE9 116 aa14.17□□□□□ -0.14
DDX41-202ENST00000503078 FBN3Q75N90 2809 aa14.16□□□□□ -0.14
DDX41-202ENST00000503078 ALMS1Q8TCU4 4167 aa14.16□□□□□ -0.14
DDX41-202ENST00000503078 FAM229AH3BQW9 127 aa14.15□□□□□ -0.14
DDX41-202ENST00000503078 TGP01266 2768 aa14.1□□□□□ -0.15
DDX41-202ENST00000503078 RETNLBQ9BQ08 111 aa14.07□□□□□ -0.16
DDX41-202ENST00000503078 IGKV2-30P06310 120 aa14.07□□□□□ -0.16
DDX41-202ENST00000503078 C7orf65Q6ZTY9 151 aa14.05□□□□□ -0.16
DDX41-202ENST00000503078 RBM12B-AS1Q9P1G2 102 aa14.04□□□□□ -0.16
DDX41-202ENST00000503078 LY6G6CO95867 125 aa14.03□□□□□ -0.16
DDX41-202ENST00000503078 KRTAP13-2Q52LG2 175 aa14.03□□□□□ -0.16
DDX41-202ENST00000503078 DNAH11Q96DT5 4516 aa14.02□□□□□ -0.17
DDX41-202ENST00000503078 KRTAP16-1A8MUX0 517 aa13.98□□□□□ -0.17
DDX41-202ENST00000503078 DNAH6Q9C0G6 4158 aa13.97□□□□□ -0.17
DDX41-202ENST00000503078 KRTAP10-2P60368 255 aa13.96□□□□□ -0.18
DDX41-202ENST00000503078 A0A1B0GU69 56 aa13.95□□□□□ -0.18
DDX41-202ENST00000503078 DNAH5Q8TE73 4624 aa13.95□□□□□ -0.18
DDX41-202ENST00000503078 KRTAP21-3Q3LHN1 58 aa13.92□□□□□ -0.18
DDX41-202ENST00000503078 IGKV2D-30A0A075B6S6 120 aa13.84□□□□□ -0.19
DDX41-202ENST00000503078 Q6ZSA8 131 aa13.83□□□□□ -0.19
DDX41-202ENST00000503078 SPATA8Q6RVD6 105 aa13.82□□□□□ -0.2
DDX41-202ENST00000503078 KRTAP1-4P0C5Y4 121 aa13.82□□□□□ -0.2
DDX41-202ENST00000503078 KRTAP10-1P60331 282 aa13.79□□□□□ -0.2
DDX41-202ENST00000503078 LRP1BQ9NZR2 4599 aa13.77□□□□□ -0.2
DDX41-202ENST00000503078 UQCR11O14957 56 aa13.74□□□□□ -0.21
DDX41-202ENST00000503078 MIR22HGQ0VDD5 57 aa13.73□□□□□ -0.21
DDX41-202ENST00000503078 C4orf48Q5BLP8 95 aa13.72□□□□□ -0.21
DDX41-202ENST00000503078 PKD1P98161 4303 aa13.67□□□□□ -0.22
DDX41-202ENST00000503078 PLA2G1BP04054 148 aaKnown RBP13.66□□□□□ -0.22
DDX41-202ENST00000503078 TYMSOSQ8TAI1 123 aa13.66□□□□□ -0.22
DDX41-202ENST00000503078 SPINK1P00995 79 aa13.65□□□□□ -0.22
DDX41-202ENST00000503078 HYDINQ4G0P3 5121 aa13.65□□□□□ -0.23
DDX41-202ENST00000503078 PRAC1Q96KF2 57 aa13.63□□□□□ -0.23
DDX41-202ENST00000503078 VPS13BQ7Z7G8 4022 aa13.6□□□□□ -0.23
DDX41-202ENST00000503078 FAT2Q9NYQ8 4349 aa13.6□□□□□ -0.23
DDX41-202ENST00000503078 ADM2Q7Z4H4 148 aa13.59□□□□□ -0.23
DDX41-202ENST00000503078 Q8N1X5 172 aa13.53□□□□□ -0.24
DDX41-202ENST00000503078 LINC00304Q8N9R0 145 aa13.46□□□□□ -0.25
DDX41-202ENST00000503078 RPS29P62273 56 aaKnown RBP13.45□□□□□ -0.26
DDX41-202ENST00000503078 SACSQ9NZJ4 4579 aa13.31□□□□□ -0.28
DDX41-202ENST00000503078 LINC01554Q52M75 96 aa13.3□□□□□ -0.28
DDX41-202ENST00000503078 PKHD1P08F94 4074 aa13.28□□□□□ -0.28
DDX41-202ENST00000503078 A8MUU9 505 aa13.28□□□□□ -0.28
DDX41-202ENST00000503078 C20orf166-AS1Q96NR2 134 aa13.28□□□□□ -0.28
DDX41-202ENST00000503078 C9orf92A6NGG3 77 aa13.26□□□□□ -0.29
DDX41-202ENST00000503078 CSAG1Q6PB30 78 aa13.22□□□□□ -0.29
DDX41-202ENST00000503078 H0YAA0 97 aa13.21□□□□□ -0.29
DDX41-202ENST00000503078 KRTAP3-1Q9BYR8 98 aa13.21□□□□□ -0.29
DDX41-202ENST00000503078 A0A1B0GVY2 172 aa13.16□□□□□ -0.3
DDX41-202ENST00000503078 SMR3BP02814 79 aaPredicted RBP13.14□□□□□ -0.31
DDX41-202ENST00000503078 A0A1B0GU33 70 aa13.13□□□□□ -0.31
DDX41-202ENST00000503078 PKHD1L1Q86WI1 4243 aa13.1□□□□□ -0.31
DDX41-202ENST00000503078 H1FX-AS1Q4G0G2 97 aa13.07□□□□□ -0.32
DDX41-202ENST00000503078 DYNC1H1Q14204 4646 aaKnown RBP13.07□□□□□ -0.32
DDX41-202ENST00000503078 KRTAP10-4P60372 401 aaPredicted RBP12.99□□□□□ -0.33
DDX41-202ENST00000503078 APOBP04114 4563 aaKnown RBP12.99□□□□□ -0.33
DDX41-202ENST00000503078 RYR2Q92736 4967 aa12.99□□□□□ -0.33
DDX41-202ENST00000503078 COX6B2Q6YFQ2 88 aa12.95□□□□□ -0.34
DDX41-202ENST00000503078 FAT1Q14517 4588 aa12.92□□□□□ -0.34
DDX41-202ENST00000503078 KMT2CQ8NEZ4 4911 aaKnown RBP12.89□□□□□ -0.35
DDX41-202ENST00000503078 KRTAP25-1Q3LHN0 102 aa12.85□□□□□ -0.35
DDX41-202ENST00000503078 K7ERS5 55 aa12.78□□□□□ -0.36
DDX41-202ENST00000503078 FLG2Q5D862 2391 aaPredicted RBP12.73□□□□□ -0.37
DDX41-202ENST00000503078 KRTAP3-3Q9BYR6 98 aa12.63□□□□□ -0.39
DDX41-202ENST00000503078 FAT3Q8TDW7 4589 aa12.63□□□□□ -0.39
DDX41-202ENST00000503078 KRTAP10-6P60371 365 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms