RNA–Protein interactions for RNA: ENST00000492816.6

FN1-224, Transcript of fibronectin 1, humanhuman

TSL 5

Gene FN1, Length 9,171 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-224ENST00000492816 A0A1B0GVY2 172 aa3.02□□□□□ -1.93
FN1-224ENST00000492816 Q6ZRN7 208 aaPredicted RBP3.02□□□□□ -1.93
FN1-224ENST00000492816 DSPP15924 2871 aaKnown RBP3.02□□□□□ -1.93
FN1-224ENST00000492816 COL6A5A8TX70 2615 aa3.01□□□□□ -1.93
FN1-224ENST00000492816 ZZEF1O43149 2961 aa3.01□□□□□ -1.93
FN1-224ENST00000492816 NOTCH2NLQ7Z3S9 236 aa3□□□□□ -1.93
FN1-224ENST00000492816 LAMA5O15230 3695 aa3□□□□□ -1.93
FN1-224ENST00000492816 ATMQ13315 3056 aa3□□□□□ -1.93
FN1-224ENST00000492816 PP632Q6XCG6 107 aa2.99□□□□□ -1.93
FN1-224ENST00000492816 DCHS1Q96JQ0 3298 aa2.99□□□□□ -1.93
FN1-224ENST00000492816 BOD1L1Q8NFC6 3051 aa2.99□□□□□ -1.93
FN1-224ENST00000492816 ITPR2Q14571 2701 aa2.98□□□□□ -1.93
FN1-224ENST00000492816 CYSTM1Q9H1C7 97 aa2.98□□□□□ -1.93
FN1-224ENST00000492816 DMXL2Q8TDJ6 3036 aa2.97□□□□□ -1.93
FN1-224ENST00000492816 AKAP13Q12802 2813 aa2.97□□□□□ -1.93
FN1-224ENST00000492816 MGAQ8IWI9 3026 aa2.96□□□□□ -1.93
FN1-224ENST00000492816 IGSF10Q6WRI0 2623 aa2.96□□□□□ -1.94
FN1-224ENST00000492816 Q5VV11 94 aa2.95□□□□□ -1.94
FN1-224ENST00000492816 XP32Q5T750 250 aa2.95□□□□□ -1.94
FN1-224ENST00000492816 CENPEQ02224 2701 aa2.95□□□□□ -1.94
FN1-224ENST00000492816 C10orf95Q9H7T3 257 aa2.94□□□□□ -1.94
FN1-224ENST00000492816 KRTAP13-2Q52LG2 175 aa2.94□□□□□ -1.94
FN1-224ENST00000492816 GCN1Q92616 2671 aaKnown RBP2.94□□□□□ -1.94
FN1-224ENST00000492816 PRRC2CQ9Y520 2896 aaKnown RBP2.94□□□□□ -1.94
FN1-224ENST00000492816 CELSR1Q9NYQ6 3014 aa2.94□□□□□ -1.94
FN1-224ENST00000492816 CELSR2Q9HCU4 2923 aa2.92□□□□□ -1.94
FN1-224ENST00000492816 KRTAP4-16G5E9R7 235 aaPredicted RBP2.92□□□□□ -1.94
FN1-224ENST00000492816 AKAP9Q99996 3911 aa2.91□□□□□ -1.94
FN1-224ENST00000492816 NSD1Q96L73 2696 aaPredicted RBP2.91□□□□□ -1.94
FN1-224ENST00000492816 ASH1LQ9NR48 2969 aaKnown RBP2.9□□□□□ -1.94
FN1-224ENST00000492816 ADGRG4Q8IZF6 3080 aa2.89□□□□□ -1.95
FN1-224ENST00000492816 VPS13CQ709C8 3753 aa2.88□□□□□ -1.95
FN1-224ENST00000492816 SVEP1Q4LDE5 3571 aa2.88□□□□□ -1.95
FN1-224ENST00000492816 MAP1AP78559 2803 aaPredicted RBP2.87□□□□□ -1.95
FN1-224ENST00000492816 KRTAP25-1Q3LHN0 102 aa2.87□□□□□ -1.95
FN1-224ENST00000492816 ZFHX3Q15911 3703 aa2.87□□□□□ -1.95
FN1-224ENST00000492816 PRAC1Q96KF2 57 aa2.86□□□□□ -1.95
FN1-224ENST00000492816 FBN2P35556 2912 aa2.86□□□□□ -1.95
FN1-224ENST00000492816 TACC2O95359 2948 aa2.86□□□□□ -1.95
FN1-224ENST00000492816 CHD6Q8TD26 2715 aa2.86□□□□□ -1.95
FN1-224ENST00000492816 LRBAP50851 2863 aa2.85□□□□□ -1.95
FN1-224ENST00000492816 CRYBG3Q68DQ2 2970 aa2.85□□□□□ -1.95
FN1-224ENST00000492816 A6NN06 94 aa2.85□□□□□ -1.95
FN1-224ENST00000492816 UBR5O95071 2799 aaPredicted RBP2.85□□□□□ -1.95
FN1-224ENST00000492816 KRTAP13-1Q8IUC0 172 aa2.84□□□□□ -1.95
FN1-224ENST00000492816 ANK3Q12955 4377 aaKnown RBP2.84□□□□□ -1.96
FN1-224ENST00000492816 KRTAP13-3Q3SY46 172 aa2.84□□□□□ -1.96
FN1-224ENST00000492816 NBPF19A0A087WUL8 3843 aa2.83□□□□□ -1.96
FN1-224ENST00000492816 KRTAP16-1A8MUX0 517 aa2.83□□□□□ -1.96
FN1-224ENST00000492816 A8MU10 97 aa2.81□□□□□ -1.96
FN1-224ENST00000492816 KRTAP11-1Q8IUC1 163 aa2.81□□□□□ -1.96
FN1-224ENST00000492816 NIPBLQ6KC79 2804 aaeCLIP2.8□□□□□ -1.96
FN1-224ENST00000492816 MXRA5Q9NR99 2828 aa2.8□□□□□ -1.96
FN1-224ENST00000492816 CSMD1Q96PZ7 3565 aa2.79□□□□□ -1.96
FN1-224ENST00000492816 KRTAP1-4P0C5Y4 121 aa2.77□□□□□ -1.97
FN1-224ENST00000492816 FLNCQ14315 2725 aa2.76□□□□□ -1.97
FN1-224ENST00000492816 ZNF469Q96JG9 3925 aaPredicted RBP2.76□□□□□ -1.97
FN1-224ENST00000492816 DNAH3Q8TD57 4116 aa2.76□□□□□ -1.97
FN1-224ENST00000492816 UTP20O75691 2785 aaKnown RBP2.76□□□□□ -1.97
FN1-224ENST00000492816 CSMD2Q7Z408 3487 aa2.76□□□□□ -1.97
FN1-224ENST00000492816 DNAH1Q9P2D7 4330 aa2.74□□□□□ -1.97
FN1-224ENST00000492816 PDZD2O15018 2839 aa2.74□□□□□ -1.97
FN1-224ENST00000492816 TENM4Q6N022 2769 aa2.74□□□□□ -1.97
FN1-224ENST00000492816 CUBNO60494 3623 aa2.72□□□□□ -1.97
FN1-224ENST00000492816 ZANQ9Y493 2812 aa2.71□□□□□ -1.98
FN1-224ENST00000492816 KRTAP7-1Q8IUC3 87 aa2.69□□□□□ -1.98
FN1-224ENST00000492816 H0YAA0 97 aa2.69□□□□□ -1.98
FN1-224ENST00000492816 NDUFAF8A1L188 74 aa2.69□□□□□ -1.98
FN1-224ENST00000492816 ANK2Q01484 3957 aa2.68□□□□□ -1.98
FN1-224ENST00000492816 TRRAPQ9Y4A5 3859 aa2.67□□□□□ -1.98
FN1-224ENST00000492816 TENM1Q9UKZ4 2725 aa2.67□□□□□ -1.98
FN1-224ENST00000492816 COL12A1Q99715 3063 aa2.67□□□□□ -1.98
FN1-224ENST00000492816 KRTAP15-1Q3LI76 137 aa2.66□□□□□ -1.98
FN1-224ENST00000492816 VWFP04275 2813 aa2.66□□□□□ -1.98
FN1-224ENST00000492816 DYNC2H1Q8NCM8 4307 aaKnown RBP2.65□□□□□ -1.98
FN1-224ENST00000492816 HIVEP1P15822 2718 aa2.65□□□□□ -1.99
FN1-224ENST00000492816 LYSTQ99698 3801 aa2.64□□□□□ -1.99
FN1-224ENST00000492816 NF1P21359 2839 aa2.64□□□□□ -1.99
FN1-224ENST00000492816 OTOGQ6ZRI0 2925 aa2.63□□□□□ -1.99
FN1-224ENST00000492816 APCP25054 2843 aa2.63□□□□□ -1.99
FN1-224ENST00000492816 KRTAP12-2P59991 146 aa2.62□□□□□ -1.99
FN1-224ENST00000492816 CMYA5Q8N3K9 4069 aa2.62□□□□□ -1.99
FN1-224ENST00000492816 TENM3Q9P273 2699 aa2.61□□□□□ -1.99
FN1-224ENST00000492816 KRTAP13-4Q3LI77 160 aa2.6□□□□□ -1.99
FN1-224ENST00000492816 CRCT1Q9UGL9 99 aa2.59□□□□□ -2
FN1-224ENST00000492816 DNAH17Q9UFH2 4485 aa2.58□□□□□ -2
FN1-224ENST00000492816 NBEAL2Q6ZNJ1 2754 aa2.58□□□□□ -2
FN1-224ENST00000492816 FBN3Q75N90 2809 aa2.57□□□□□ -2
FN1-224ENST00000492816 KRTAP10-6P60371 365 aaPredicted RBP2.55□□□□□ -2
FN1-224ENST00000492816 TENM2Q9NT68 2774 aa2.54□□□□□ -2
FN1-224ENST00000492816 LORP23490 312 aaPredicted RBP2.54□□□□□ -2
FN1-224ENST00000492816 KRTAP10-12P60413 245 aa2.54□□□□□ -2
FN1-224ENST00000492816 KRTAP8-1Q8IUC2 63 aa2.53□□□□□ -2
FN1-224ENST00000492816 CSMD3Q7Z407 3707 aa2.53□□□□□ -2
FN1-224ENST00000492816 PKD1L1Q8TDX9 2849 aa2.52□□□□□ -2.01
FN1-224ENST00000492816 DNHD1Q96M86 4753 aa2.51□□□□□ -2.01
FN1-224ENST00000492816 DNAH9Q9NYC9 4486 aa2.51□□□□□ -2.01
FN1-224ENST00000492816 PRKDCP78527 4128 aaKnown RBP2.5□□□□□ -2.01
FN1-224ENST00000492816 COL7A1Q02388 2944 aa2.5□□□□□ -2.01
FN1-224ENST00000492816 DNAH7Q8WXX0 4024 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 223 ms