RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 DCHS2Q6V1P9 2916 aa3.29□□□□□ -1.88
PRPF4B-205ENST00000480058 H0YAA0 97 aa3.28□□□□□ -1.88
PRPF4B-205ENST00000480058 ASH1LQ9NR48 2969 aaKnown RBP3.28□□□□□ -1.88
PRPF4B-205ENST00000480058 ZANQ9Y493 2812 aa3.26□□□□□ -1.89
PRPF4B-205ENST00000480058 CFAP54Q96N23 3096 aa3.25□□□□□ -1.89
PRPF4B-205ENST00000480058 COL6A3P12111 3177 aa3.24□□□□□ -1.89
PRPF4B-205ENST00000480058 C5orf42Q9H799 3197 aa3.24□□□□□ -1.89
PRPF4B-205ENST00000480058 TGP01266 2768 aa3.24□□□□□ -1.89
PRPF4B-205ENST00000480058 LRBAP50851 2863 aa3.24□□□□□ -1.89
PRPF4B-205ENST00000480058 PDZD2O15018 2839 aa3.24□□□□□ -1.89
PRPF4B-205ENST00000480058 TPRXLQ17RH7 258 aa3.24□□□□□ -1.89
PRPF4B-205ENST00000480058 DMXL2Q8TDJ6 3036 aa3.22□□□□□ -1.89
PRPF4B-205ENST00000480058 XP32Q5T750 250 aa3.22□□□□□ -1.89
PRPF4B-205ENST00000480058 PCLOQ9Y6V0 5065 aa3.22□□□□□ -1.89
PRPF4B-205ENST00000480058 WDFY4Q6ZS81 3184 aa3.2□□□□□ -1.9
PRPF4B-205ENST00000480058 PRUNE2Q8WUY3 3088 aa3.19□□□□□ -1.9
PRPF4B-205ENST00000480058 ATMQ13315 3056 aa3.19□□□□□ -1.9
PRPF4B-205ENST00000480058 ZZEF1O43149 2961 aa3.18□□□□□ -1.9
PRPF4B-205ENST00000480058 NBEAQ8NFP9 2946 aa3.18□□□□□ -1.9
PRPF4B-205ENST00000480058 RANBP2P49792 3224 aaKnown RBP3.18□□□□□ -1.9
PRPF4B-205ENST00000480058 FRYLO94915 3013 aa3.18□□□□□ -1.9
PRPF4B-205ENST00000480058 REV3LO60673 3130 aa3.18□□□□□ -1.9
PRPF4B-205ENST00000480058 C10orf95Q9H7T3 257 aa3.17□□□□□ -1.9
PRPF4B-205ENST00000480058 COL12A1Q99715 3063 aa3.17□□□□□ -1.9
PRPF4B-205ENST00000480058 LAMA5O15230 3695 aa3.16□□□□□ -1.9
PRPF4B-205ENST00000480058 MUC3AQ02505 3323 aa3.16□□□□□ -1.9
PRPF4B-205ENST00000480058 MXRA5Q9NR99 2828 aa3.16□□□□□ -1.9
PRPF4B-205ENST00000480058 KRTAP10-8P60410 259 aa3.11□□□□□ -1.91
PRPF4B-205ENST00000480058 HTTP42858 3142 aa3.11□□□□□ -1.91
PRPF4B-205ENST00000480058 PRO2289Q9P1D8 64 aa3.1□□□□□ -1.91
PRPF4B-205ENST00000480058 SRRM2Q9UQ35 2752 aaKnown RBP3.1□□□□□ -1.91
PRPF4B-205ENST00000480058 KRTAP13-4Q3LI77 160 aa3.09□□□□□ -1.91
PRPF4B-205ENST00000480058 PCNTO95613 3336 aa3.09□□□□□ -1.91
PRPF4B-205ENST00000480058 ADGRG4Q8IZF6 3080 aa3.08□□□□□ -1.92
PRPF4B-205ENST00000480058 CRYBG3Q68DQ2 2970 aa3.07□□□□□ -1.92
PRPF4B-205ENST00000480058 LAMA1P25391 3075 aa3.07□□□□□ -1.92
PRPF4B-205ENST00000480058 PKD1L1Q8TDX9 2849 aa3.06□□□□□ -1.92
PRPF4B-205ENST00000480058 FBN2P35556 2912 aa3.05□□□□□ -1.92
PRPF4B-205ENST00000480058 VPS13AQ96RL7 3174 aa3.05□□□□□ -1.92
PRPF4B-205ENST00000480058 KRTAP12-1P59990 96 aa3.04□□□□□ -1.92
PRPF4B-205ENST00000480058 KRTAP3-1Q9BYR8 98 aa3.01□□□□□ -1.93
PRPF4B-205ENST00000480058 FBN3Q75N90 2809 aa3□□□□□ -1.93
PRPF4B-205ENST00000480058 RELNP78509 3460 aa3□□□□□ -1.93
PRPF4B-205ENST00000480058 KRTAP10-6P60371 365 aaPredicted RBP3□□□□□ -1.93
PRPF4B-205ENST00000480058 GOLGB1Q14789 3259 aaKnown RBP3□□□□□ -1.93
PRPF4B-205ENST00000480058 KRTAP23-1A1A580 65 aa2.99□□□□□ -1.93
PRPF4B-205ENST00000480058 INE1O15225 51 aa2.99□□□□□ -1.93
PRPF4B-205ENST00000480058 HRNRQ86YZ3 2850 aaPredicted RBP2.99□□□□□ -1.93
PRPF4B-205ENST00000480058 MKI67P46013 3256 aaKnown RBP2.98□□□□□ -1.93
PRPF4B-205ENST00000480058 KRTAP12-2P59991 146 aa2.98□□□□□ -1.93
PRPF4B-205ENST00000480058 DMXL1Q9Y485 3027 aa2.98□□□□□ -1.93
PRPF4B-205ENST00000480058 BOD1L1Q8NFC6 3051 aa2.97□□□□□ -1.93
PRPF4B-205ENST00000480058 A0A1B0GVY2 172 aa2.96□□□□□ -1.94
PRPF4B-205ENST00000480058 KRTAP10-10P60014 251 aa2.96□□□□□ -1.94
PRPF4B-205ENST00000480058 RYR1P21817 5038 aa2.94□□□□□ -1.94
PRPF4B-205ENST00000480058 UBR4Q5T4S7 5183 aa2.93□□□□□ -1.94
PRPF4B-205ENST00000480058 FREM2Q5SZK8 3169 aa2.91□□□□□ -1.94
PRPF4B-205ENST00000480058 KRTAP15-1Q3LI76 137 aa2.9□□□□□ -1.95
PRPF4B-205ENST00000480058 VCANP13611 3396 aa2.89□□□□□ -1.95
PRPF4B-205ENST00000480058 CELSR1Q9NYQ6 3014 aa2.88□□□□□ -1.95
PRPF4B-205ENST00000480058 KRTAP3-2Q9BYR7 98 aa2.88□□□□□ -1.95
PRPF4B-205ENST00000480058 SZT2Q5T011 3432 aa2.88□□□□□ -1.95
PRPF4B-205ENST00000480058 HYDINQ4G0P3 5121 aa2.87□□□□□ -1.95
PRPF4B-205ENST00000480058 BRCA2P51587 3418 aa2.87□□□□□ -1.95
PRPF4B-205ENST00000480058 MEGF8Q7Z7M0 2845 aa2.86□□□□□ -1.95
PRPF4B-205ENST00000480058 CDH23Q9H251 3354 aa2.86□□□□□ -1.95
PRPF4B-205ENST00000480058 SPTBN5Q9NRC6 3674 aaKnown RBP2.86□□□□□ -1.95
PRPF4B-205ENST00000480058 LAMA3Q16787 3333 aa2.85□□□□□ -1.95
PRPF4B-205ENST00000480058 FBN1P35555 2871 aaKnown RBP2.84□□□□□ -1.95
PRPF4B-205ENST00000480058 USP34Q70CQ2 3546 aa2.83□□□□□ -1.96
PRPF4B-205ENST00000480058 KRTAP3-3Q9BYR6 98 aa2.82□□□□□ -1.96
PRPF4B-205ENST00000480058 COL7A1Q02388 2944 aa2.81□□□□□ -1.96
PRPF4B-205ENST00000480058 CSMD2Q7Z408 3487 aa2.8□□□□□ -1.96
PRPF4B-205ENST00000480058 BSNQ9UPA5 3926 aa2.8□□□□□ -1.96
PRPF4B-205ENST00000480058 ABCA13Q86UQ4 5058 aa2.8□□□□□ -1.96
PRPF4B-205ENST00000480058 WDFY3Q8IZQ1 3526 aa2.79□□□□□ -1.96
PRPF4B-205ENST00000480058 OTOGQ6ZRI0 2925 aa2.76□□□□□ -1.97
PRPF4B-205ENST00000480058 UTRNP46939 3433 aa2.76□□□□□ -1.97
PRPF4B-205ENST00000480058 MT1HL1P0DM35 61 aa2.76□□□□□ -1.97
PRPF4B-205ENST00000480058 DNAH14Q0VDD8 3507 aa2.76□□□□□ -1.97
PRPF4B-205ENST00000480058 CFAP47Q6ZTR5 3102 aa2.76□□□□□ -1.97
PRPF4B-205ENST00000480058 CUBNO60494 3623 aa2.75□□□□□ -1.97
PRPF4B-205ENST00000480058 KRTAP19-4Q3LI73 84 aa2.73□□□□□ -1.97
PRPF4B-205ENST00000480058 KRTAP10-4P60372 401 aaPredicted RBP2.73□□□□□ -1.97
PRPF4B-205ENST00000480058 XIRP2A4UGR9 3374 aa2.73□□□□□ -1.97
PRPF4B-205ENST00000480058 EPPK1P58107 5090 aaKnown RBP2.7□□□□□ -1.98
PRPF4B-205ENST00000480058 KRTAP10-12P60413 245 aa2.69□□□□□ -1.98
PRPF4B-205ENST00000480058 KRTAP12-3P60328 96 aa2.69□□□□□ -1.98
PRPF4B-205ENST00000480058 SPENQ96T58 3664 aaKnown RBP2.64□□□□□ -1.99
PRPF4B-205ENST00000480058 CSMD1Q96PZ7 3565 aa2.62□□□□□ -1.99
PRPF4B-205ENST00000480058 ZNF469Q96JG9 3925 aaPredicted RBP2.61□□□□□ -1.99
PRPF4B-205ENST00000480058 NBPF19A0A087WUL8 3843 aa2.59□□□□□ -1.99
PRPF4B-205ENST00000480058 RYR2Q92736 4967 aa2.57□□□□□ -2
PRPF4B-205ENST00000480058 KRTAP8-1Q8IUC2 63 aa2.56□□□□□ -2
PRPF4B-205ENST00000480058 DCHS1Q96JQ0 3298 aa2.56□□□□□ -2
PRPF4B-205ENST00000480058 KIAA1109Q2LD37 5005 aa2.55□□□□□ -2
PRPF4B-205ENST00000480058 LCE3AQ5TA76 89 aa2.53□□□□□ -2
PRPF4B-205ENST00000480058 LOC400499M0QZD8 3231 aa2.53□□□□□ -2
PRPF4B-205ENST00000480058 DNHD1Q96M86 4753 aa2.53□□□□□ -2
PRPF4B-205ENST00000480058 KMT2CQ8NEZ4 4911 aaKnown RBP2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms