RNA–Protein interactions for RNA: ENST00000469939.1

TTC3-213, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-213ENST00000469939 PTPRZ1P23471 2315 aaPredicted RBP0.8□□□□□ -2.28
TTC3-213ENST00000469939 EYSQ5T1H1 3165 aa0.8□□□□□ -2.28
TTC3-213ENST00000469939 VCANP13611 3396 aa0.79□□□□□ -2.28
TTC3-213ENST00000469939 DEFB104AQ8WTQ1 72 aa0.79□□□□□ -2.28
TTC3-213ENST00000469939 SMR3AQ99954 134 aa0.79□□□□□ -2.28
TTC3-213ENST00000469939 PCNX1Q96RV3 2341 aa0.79□□□□□ -2.28
TTC3-213ENST00000469939 MYO9AB2RTY4 2548 aa0.79□□□□□ -2.28
TTC3-213ENST00000469939 SETD2Q9BYW2 2564 aaPredicted RBP0.79□□□□□ -2.28
TTC3-213ENST00000469939 SPTBN1Q01082 2364 aaKnown RBP0.78□□□□□ -2.28
TTC3-213ENST00000469939 CELSR2Q9HCU4 2923 aa0.78□□□□□ -2.28
TTC3-213ENST00000469939 MKI67P46013 3256 aaKnown RBP0.77□□□□□ -2.29
TTC3-213ENST00000469939 RYR3Q15413 4870 aa0.77□□□□□ -2.29
TTC3-213ENST00000469939 PKDREJQ9NTG1 2253 aa0.77□□□□□ -2.29
TTC3-213ENST00000469939 PIEZO2Q9H5I5 2752 aa0.77□□□□□ -2.29
TTC3-213ENST00000469939 BIRC6Q9NR09 4857 aa0.77□□□□□ -2.29
TTC3-213ENST00000469939 STATHP02808 62 aa0.77□□□□□ -2.29
TTC3-213ENST00000469939 COL6A5A8TX70 2615 aa0.77□□□□□ -2.29
TTC3-213ENST00000469939 GCN1Q92616 2671 aaKnown RBP0.77□□□□□ -2.29
TTC3-213ENST00000469939 WDFY4Q6ZS81 3184 aa0.77□□□□□ -2.29
TTC3-213ENST00000469939 SPG11Q96JI7 2443 aa0.76□□□□□ -2.29
TTC3-213ENST00000469939 WNK1Q9H4A3 2382 aa0.76□□□□□ -2.29
TTC3-213ENST00000469939 M0QZ58 72 aa0.76□□□□□ -2.29
TTC3-213ENST00000469939 RHPN1-AS1Q9BWJ2 59 aa0.76□□□□□ -2.29
TTC3-213ENST00000469939 UNC80Q8N2C7 3258 aa0.76□□□□□ -2.29
TTC3-213ENST00000469939 RANBP2P49792 3224 aaKnown RBP0.76□□□□□ -2.29
TTC3-213ENST00000469939 IGF2RP11717 2491 aa0.76□□□□□ -2.29
TTC3-213ENST00000469939 GVINP1Q7Z2Y8 2422 aa0.76□□□□□ -2.29
TTC3-213ENST00000469939 AKAP6Q13023 2319 aa0.76□□□□□ -2.29
TTC3-213ENST00000469939 CELSR3Q9NYQ7 3312 aa0.75□□□□□ -2.29
TTC3-213ENST00000469939 MUC2Q02817 5179 aa0.75□□□□□ -2.29
TTC3-213ENST00000469939 REV3LO60673 3130 aa0.75□□□□□ -2.29
TTC3-213ENST00000469939 APELAP0DMC3 54 aa0.75□□□□□ -2.29
TTC3-213ENST00000469939 Q9Y3F1 56 aa0.75□□□□□ -2.29
TTC3-213ENST00000469939 SPTBN4Q9H254 2564 aa0.75□□□□□ -2.29
TTC3-213ENST00000469939 CHD9Q3L8U1 2897 aa0.75□□□□□ -2.29
TTC3-213ENST00000469939 STAB1Q9NY15 2570 aa0.74□□□□□ -2.29
TTC3-213ENST00000469939 ANKHD1Q8IWZ3 2542 aaKnown RBP0.74□□□□□ -2.29
TTC3-213ENST00000469939 MUC3AQ02505 3323 aa0.74□□□□□ -2.29
TTC3-213ENST00000469939 SPINK1P00995 79 aa0.74□□□□□ -2.29
TTC3-213ENST00000469939 GOLGB1Q14789 3259 aaKnown RBP0.74□□□□□ -2.29
TTC3-213ENST00000469939 CEP250Q9BV73 2442 aa0.74□□□□□ -2.29
TTC3-213ENST00000469939 CSPG4Q6UVK1 2322 aa0.73□□□□□ -2.29
TTC3-213ENST00000469939 DNAH12Q6ZR08 3092 aa0.73□□□□□ -2.29
TTC3-213ENST00000469939 CCDC168Q8NDH2 2452 aa0.73□□□□□ -2.29
TTC3-213ENST00000469939 VWFP04275 2813 aa0.73□□□□□ -2.29
TTC3-213ENST00000469939 RYR1P21817 5038 aa0.73□□□□□ -2.29
TTC3-213ENST00000469939 MAP1BP46821 2468 aaKnown RBP0.73□□□□□ -2.29
TTC3-213ENST00000469939 KALRNO60229 2985 aa0.72□□□□□ -2.29
TTC3-213ENST00000469939 ACACAQ13085 2346 aa0.72□□□□□ -2.29
TTC3-213ENST00000469939 USP34Q70CQ2 3546 aa0.72□□□□□ -2.29
TTC3-213ENST00000469939 ZFYVE26Q68DK2 2539 aa0.72□□□□□ -2.29
TTC3-213ENST00000469939 HYDINQ4G0P3 5121 aa0.72□□□□□ -2.29
TTC3-213ENST00000469939 NBEAL2Q6ZNJ1 2754 aa0.72□□□□□ -2.29
TTC3-213ENST00000469939 EP400Q96L91 3159 aa0.71□□□□□ -2.3
TTC3-213ENST00000469939 RELNP78509 3460 aa0.71□□□□□ -2.3
TTC3-213ENST00000469939 ACACBO00763 2458 aa0.71□□□□□ -2.3
TTC3-213ENST00000469939 DEFB1P60022 68 aa0.71□□□□□ -2.3
TTC3-213ENST00000469939 DEFB110Q30KQ9 67 aa0.71□□□□□ -2.3
TTC3-213ENST00000469939 DEFB124Q8NES8 71 aa0.71□□□□□ -2.3
TTC3-213ENST00000469939 BRCA2P51587 3418 aa0.71□□□□□ -2.3
TTC3-213ENST00000469939 NCOR2Q9Y618 2525 aa0.71□□□□□ -2.3
TTC3-213ENST00000469939 DCHS1Q96JQ0 3298 aa0.7□□□□□ -2.3
TTC3-213ENST00000469939 SPTAN1Q13813 2472 aaKnown RBP0.7□□□□□ -2.3
TTC3-213ENST00000469939 FLNAP21333 2647 aaKnown RBP0.7□□□□□ -2.3
TTC3-213ENST00000469939 NCOR1O75376 2440 aa0.7□□□□□ -2.3
TTC3-213ENST00000469939 EPPK1P58107 5090 aaKnown RBP0.7□□□□□ -2.3
TTC3-213ENST00000469939 SPEGQ15772 3267 aa0.69□□□□□ -2.3
TTC3-213ENST00000469939 CFAP46Q8IYW2 2715 aa0.69□□□□□ -2.3
TTC3-213ENST00000469939 CSMD1Q96PZ7 3565 aa0.69□□□□□ -2.3
TTC3-213ENST00000469939 H3BNG1 76 aa0.69□□□□□ -2.3
TTC3-213ENST00000469939 HTN1P15515 57 aa0.69□□□□□ -2.3
TTC3-213ENST00000469939 DEFB108BQ8NET1 73 aa0.69□□□□□ -2.3
TTC3-213ENST00000469939 UBR5O95071 2799 aaPredicted RBP0.69□□□□□ -2.3
TTC3-213ENST00000469939 SPTA1P02549 2419 aa0.69□□□□□ -2.3
TTC3-213ENST00000469939 BOD1L1Q8NFC6 3051 aa0.69□□□□□ -2.3
TTC3-213ENST00000469939 IGSF10Q6WRI0 2623 aa0.68□□□□□ -2.3
TTC3-213ENST00000469939 CREBBPQ92793 2442 aa0.68□□□□□ -2.3
TTC3-213ENST00000469939 TLN1Q9Y490 2541 aaKnown RBP0.68□□□□□ -2.3
TTC3-213ENST00000469939 CEP290O15078 2479 aa0.68□□□□□ -2.3
TTC3-213ENST00000469939 TNP1P09430 55 aa0.68□□□□□ -2.3
TTC3-213ENST00000469939 CFAP54Q96N23 3096 aa0.68□□□□□ -2.3
TTC3-213ENST00000469939 CSMD3Q7Z407 3707 aa0.68□□□□□ -2.3
TTC3-213ENST00000469939 ASPMQ8IZT6 3477 aa0.68□□□□□ -2.3
TTC3-213ENST00000469939 RYR2Q92736 4967 aa0.67□□□□□ -2.3
TTC3-213ENST00000469939 BSNQ9UPA5 3926 aa0.67□□□□□ -2.3
TTC3-213ENST00000469939 LRRK2Q5S007 2527 aa0.67□□□□□ -2.3
TTC3-213ENST00000469939 TENM2Q9NT68 2774 aa0.67□□□□□ -2.3
TTC3-213ENST00000469939 ATRQ13535 2644 aa0.67□□□□□ -2.3
TTC3-213ENST00000469939 RPS29P62273 56 aaKnown RBP0.67□□□□□ -2.3
TTC3-213ENST00000469939 LINC01556Q5JQF7 62 aa0.67□□□□□ -2.3
TTC3-213ENST00000469939 HERC1Q15751 4861 aa0.66□□□□□ -2.3
TTC3-213ENST00000469939 MACF1Q9UPN3 7388 aaKnown RBP0.66□□□□□ -2.3
TTC3-213ENST00000469939 NEBP20929 6669 aa0.66□□□□□ -2.3
TTC3-213ENST00000469939 KMT2CQ8NEZ4 4911 aaKnown RBP0.66□□□□□ -2.3
TTC3-213ENST00000469939 TENM3Q9P273 2699 aa0.66□□□□□ -2.3
TTC3-213ENST00000469939 ABCA13Q86UQ4 5058 aa0.66□□□□□ -2.3
TTC3-213ENST00000469939 C9orf92A6NGG3 77 aa0.66□□□□□ -2.3
TTC3-213ENST00000469939 DEFB136Q30KP8 78 aa0.66□□□□□ -2.3
TTC3-213ENST00000469939 ZANQ9Y493 2812 aa0.66□□□□□ -2.3
TTC3-213ENST00000469939 SYNE2Q8WXH0 6885 aaKnown RBP0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms