RNA–Protein interactions for RNA: ENST00000434316.6

TMCO3-202, Transcript of transmembrane and coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO3, Length 3,050 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-202ENST00000434316 LINC01558Q9Y6Z2 57 aa8.87□□□□□ -0.99
TMCO3-202ENST00000434316 PLAC8Q9NZF1 115 aa8.86□□□□□ -0.99
TMCO3-202ENST00000434316 SPINK6Q6UWN8 80 aa8.86□□□□□ -0.99
TMCO3-202ENST00000434316 ZNF706Q9Y5V0 76 aaPredicted RBP8.86□□□□□ -0.99
TMCO3-202ENST00000434316 IGLV5-52A0A0A0MRZ9 124 aa8.85□□□□□ -0.99
TMCO3-202ENST00000434316 A0A087WTM6 91 aa8.84□□□□□ -0.99
TMCO3-202ENST00000434316 Q5W150 140 aa8.84□□□□□ -0.99
TMCO3-202ENST00000434316 HECTD4Q9Y4D8 3996 aa8.84□□□□□ -0.99
TMCO3-202ENST00000434316 ATP11AUNQ6ZP68 121 aa8.83□□□□□ -1
TMCO3-202ENST00000434316 CDC42SE1Q9NRR8 79 aa8.82□□□□□ -1
TMCO3-202ENST00000434316 ZNF861PO60384 105 aa8.82□□□□□ -1
TMCO3-202ENST00000434316 SPINK7P58062 85 aa8.82□□□□□ -1
TMCO3-202ENST00000434316 RTL8CO15255 209 aa8.81□□□□□ -1
TMCO3-202ENST00000434316 STARD9Q9P2P6 4700 aa8.8□□□□□ -1
TMCO3-202ENST00000434316 VPS13DQ5THJ4 4388 aa8.8□□□□□ -1
TMCO3-202ENST00000434316 PRR26Q8N8Z3 221 aa8.79□□□□□ -1
TMCO3-202ENST00000434316 KTN1-AS1Q86SY8 53 aa8.79□□□□□ -1
TMCO3-202ENST00000434316 NUPR2A6NF83 97 aa8.78□□□□□ -1
TMCO3-202ENST00000434316 A6NN06 94 aa8.78□□□□□ -1
TMCO3-202ENST00000434316 KRTAP13-3Q3SY46 172 aa8.77□□□□□ -1.01
TMCO3-202ENST00000434316 CIRBP-AS1Q8TBR5 109 aa8.76□□□□□ -1.01
TMCO3-202ENST00000434316 DNAH17Q9UFH2 4485 aa8.76□□□□□ -1.01
TMCO3-202ENST00000434316 KMT2AQ03164 3969 aa8.73□□□□□ -1.01
TMCO3-202ENST00000434316 DNAH2Q9P225 4427 aa8.72□□□□□ -1.01
TMCO3-202ENST00000434316 RETNLBQ9BQ08 111 aa8.69□□□□□ -1.02
TMCO3-202ENST00000434316 IGLV7-43P04211 117 aa8.69□□□□□ -1.02
TMCO3-202ENST00000434316 FBN3Q75N90 2809 aa8.69□□□□□ -1.02
TMCO3-202ENST00000434316 ALMS1Q8TCU4 4167 aa8.68□□□□□ -1.02
TMCO3-202ENST00000434316 RBM12B-AS1Q9P1G2 102 aa8.68□□□□□ -1.02
TMCO3-202ENST00000434316 ACYP2P14621 99 aa8.66□□□□□ -1.02
TMCO3-202ENST00000434316 PRKDCP78527 4128 aaKnown RBP8.66□□□□□ -1.02
TMCO3-202ENST00000434316 TGP01266 2768 aa8.65□□□□□ -1.02
TMCO3-202ENST00000434316 MEGF8Q7Z7M0 2845 aa8.64□□□□□ -1.03
TMCO3-202ENST00000434316 C8orf87E5RJ46 101 aa8.62□□□□□ -1.03
TMCO3-202ENST00000434316 C7orf65Q6ZTY9 151 aa8.62□□□□□ -1.03
TMCO3-202ENST00000434316 DMAC1Q96GE9 116 aa8.62□□□□□ -1.03
TMCO3-202ENST00000434316 LINC00313P59037 77 aa8.61□□□□□ -1.03
TMCO3-202ENST00000434316 SSBP3-AS1Q7Z2R9 100 aa8.6□□□□□ -1.03
TMCO3-202ENST00000434316 DNAH11Q96DT5 4516 aa8.59□□□□□ -1.03
TMCO3-202ENST00000434316 DNAH6Q9C0G6 4158 aa8.58□□□□□ -1.04
TMCO3-202ENST00000434316 FAM229AH3BQW9 127 aa8.57□□□□□ -1.04
TMCO3-202ENST00000434316 C1orf134Q5TEV5 83 aa8.56□□□□□ -1.04
TMCO3-202ENST00000434316 IGKV2-30P06310 120 aa8.55□□□□□ -1.04
TMCO3-202ENST00000434316 KRTAP13-2Q52LG2 175 aa8.55□□□□□ -1.04
TMCO3-202ENST00000434316 A0A1B0GU69 56 aa8.52□□□□□ -1.05
TMCO3-202ENST00000434316 DNAH5Q8TE73 4624 aa8.51□□□□□ -1.05
TMCO3-202ENST00000434316 KRTAP16-1A8MUX0 517 aa8.5□□□□□ -1.05
TMCO3-202ENST00000434316 KRTAP10-2P60368 255 aa8.5□□□□□ -1.05
TMCO3-202ENST00000434316 IGKV2D-30A0A075B6S6 120 aa8.48□□□□□ -1.05
TMCO3-202ENST00000434316 PRAC1Q96KF2 57 aa8.48□□□□□ -1.05
TMCO3-202ENST00000434316 LY6G6CO95867 125 aa8.47□□□□□ -1.05
TMCO3-202ENST00000434316 ADM2Q7Z4H4 148 aa8.46□□□□□ -1.06
TMCO3-202ENST00000434316 LRP1BQ9NZR2 4599 aa8.45□□□□□ -1.06
TMCO3-202ENST00000434316 SPATA8Q6RVD6 105 aa8.43□□□□□ -1.06
TMCO3-202ENST00000434316 MIR22HGQ0VDD5 57 aa8.4□□□□□ -1.07
TMCO3-202ENST00000434316 KRTAP1-4P0C5Y4 121 aa8.39□□□□□ -1.07
TMCO3-202ENST00000434316 KRTAP10-1P60331 282 aa8.39□□□□□ -1.07
TMCO3-202ENST00000434316 UQCR11O14957 56 aa8.37□□□□□ -1.07
TMCO3-202ENST00000434316 PLA2G1BP04054 148 aaKnown RBP8.35□□□□□ -1.07
TMCO3-202ENST00000434316 SPINK1P00995 79 aa8.33□□□□□ -1.08
TMCO3-202ENST00000434316 Q6ZSA8 131 aa8.33□□□□□ -1.08
TMCO3-202ENST00000434316 VPS13BQ7Z7G8 4022 aa8.33□□□□□ -1.08
TMCO3-202ENST00000434316 PKD1P98161 4303 aa8.32□□□□□ -1.08
TMCO3-202ENST00000434316 Q8N1X5 172 aa8.32□□□□□ -1.08
TMCO3-202ENST00000434316 C4orf48Q5BLP8 95 aa8.29□□□□□ -1.08
TMCO3-202ENST00000434316 TYMSOSQ8TAI1 123 aa8.28□□□□□ -1.08
TMCO3-202ENST00000434316 HYDINQ4G0P3 5121 aa8.26□□□□□ -1.09
TMCO3-202ENST00000434316 FAT2Q9NYQ8 4349 aa8.25□□□□□ -1.09
TMCO3-202ENST00000434316 DNHD1Q96M86 4753 aa8.23□□□□□ -1.09
TMCO3-202ENST00000434316 LINC01554Q52M75 96 aa8.18□□□□□ -1.1
TMCO3-202ENST00000434316 CSAG1Q6PB30 78 aa8.17□□□□□ -1.1
TMCO3-202ENST00000434316 LINC00304Q8N9R0 145 aa8.15□□□□□ -1.11
TMCO3-202ENST00000434316 C9orf92A6NGG3 77 aa8.13□□□□□ -1.11
TMCO3-202ENST00000434316 H0YAA0 97 aa8.11□□□□□ -1.11
TMCO3-202ENST00000434316 KRTAP3-1Q9BYR8 98 aa8.09□□□□□ -1.12
TMCO3-202ENST00000434316 PKHD1P08F94 4074 aa8.08□□□□□ -1.12
TMCO3-202ENST00000434316 SACSQ9NZJ4 4579 aa8.06□□□□□ -1.12
TMCO3-202ENST00000434316 SMR3BP02814 79 aaPredicted RBP8.04□□□□□ -1.12
TMCO3-202ENST00000434316 RPS29P62273 56 aaKnown RBP8.04□□□□□ -1.12
TMCO3-202ENST00000434316 A8MUU9 505 aa8.03□□□□□ -1.12
TMCO3-202ENST00000434316 C20orf166-AS1Q96NR2 134 aa8.02□□□□□ -1.13
TMCO3-202ENST00000434316 A0A1B0GU33 70 aa8.01□□□□□ -1.13
TMCO3-202ENST00000434316 H1FX-AS1Q4G0G2 97 aa7.97□□□□□ -1.13
TMCO3-202ENST00000434316 FAT1Q14517 4588 aa7.96□□□□□ -1.13
TMCO3-202ENST00000434316 DYNC1H1Q14204 4646 aaKnown RBP7.95□□□□□ -1.14
TMCO3-202ENST00000434316 PKHD1L1Q86WI1 4243 aa7.94□□□□□ -1.14
TMCO3-202ENST00000434316 FLG2Q5D862 2391 aaPredicted RBP7.91□□□□□ -1.14
TMCO3-202ENST00000434316 APOBP04114 4563 aaKnown RBP7.88□□□□□ -1.15
TMCO3-202ENST00000434316 KRTAP25-1Q3LHN0 102 aa7.88□□□□□ -1.15
TMCO3-202ENST00000434316 KRTAP10-4P60372 401 aaPredicted RBP7.86□□□□□ -1.15
TMCO3-202ENST00000434316 COX6B2Q6YFQ2 88 aa7.85□□□□□ -1.15
TMCO3-202ENST00000434316 CRIPTQ9P021 101 aa7.84□□□□□ -1.15
TMCO3-202ENST00000434316 K7ERS5 55 aa7.75□□□□□ -1.17
TMCO3-202ENST00000434316 H3BS24 57 aa7.74□□□□□ -1.17
TMCO3-202ENST00000434316 DMBT1Q9UGM3 2413 aaPredicted RBP7.74□□□□□ -1.17
TMCO3-202ENST00000434316 A0A1B0GVY2 172 aa7.73□□□□□ -1.17
TMCO3-202ENST00000434316 KRTAP10-6P60371 365 aaPredicted RBP7.72□□□□□ -1.17
TMCO3-202ENST00000434316 KRTAP3-3Q9BYR6 98 aa7.72□□□□□ -1.17
TMCO3-202ENST00000434316 KRTAP13-4Q3LI77 160 aa7.71□□□□□ -1.18
TMCO3-202ENST00000434316 FAT3Q8TDW7 4589 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms