RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 NOTCH2NLQ7Z3S9 236 aa10.46□□□□□ -0.74
SDCBP-202ENST00000413219 A0A087WTM6 91 aa10.45□□□□□ -0.74
SDCBP-202ENST00000413219 A6NN06 94 aa10.45□□□□□ -0.74
SDCBP-202ENST00000413219 KRTAP13-3Q3SY46 172 aa10.43□□□□□ -0.74
SDCBP-202ENST00000413219 ANAPC11Q9NYG5 84 aa10.4□□□□□ -0.74
SDCBP-202ENST00000413219 RTL8CO15255 209 aa10.4□□□□□ -0.75
SDCBP-202ENST00000413219 COL7A1Q02388 2944 aa10.38□□□□□ -0.75
SDCBP-202ENST00000413219 Q5W150 140 aa10.38□□□□□ -0.75
SDCBP-202ENST00000413219 C8orf87E5RJ46 101 aa10.37□□□□□ -0.75
SDCBP-202ENST00000413219 SPINK7P58062 85 aa10.37□□□□□ -0.75
SDCBP-202ENST00000413219 ACYP2P14621 99 aa10.35□□□□□ -0.75
SDCBP-202ENST00000413219 DNAH7Q8WXX0 4024 aa10.35□□□□□ -0.75
SDCBP-202ENST00000413219 PLECQ15149 4684 aaKnown RBP10.34□□□□□ -0.75
SDCBP-202ENST00000413219 SPINK6Q6UWN8 80 aa10.34□□□□□ -0.75
SDCBP-202ENST00000413219 MGAM2Q2M2H8 2515 aa10.33□□□□□ -0.76
SDCBP-202ENST00000413219 PRR26Q8N8Z3 221 aa10.31□□□□□ -0.76
SDCBP-202ENST00000413219 DNAH8Q96JB1 4490 aa10.31□□□□□ -0.76
SDCBP-202ENST00000413219 VPS13DQ5THJ4 4388 aa10.3□□□□□ -0.76
SDCBP-202ENST00000413219 IGLV7-43P04211 117 aa10.3□□□□□ -0.76
SDCBP-202ENST00000413219 C7orf65Q6ZTY9 151 aa10.29□□□□□ -0.76
SDCBP-202ENST00000413219 SSBP3-AS1Q7Z2R9 100 aa10.29□□□□□ -0.76
SDCBP-202ENST00000413219 CSMD3Q7Z407 3707 aa10.28□□□□□ -0.76
SDCBP-202ENST00000413219 DMAC1Q96GE9 116 aa10.28□□□□□ -0.76
SDCBP-202ENST00000413219 RBM12B-AS1Q9P1G2 102 aa10.28□□□□□ -0.76
SDCBP-202ENST00000413219 CIRBP-AS1Q8TBR5 109 aa10.27□□□□□ -0.76
SDCBP-202ENST00000413219 FAM229AH3BQW9 127 aa10.24□□□□□ -0.77
SDCBP-202ENST00000413219 DNAH17Q9UFH2 4485 aa10.23□□□□□ -0.77
SDCBP-202ENST00000413219 HECTD4Q9Y4D8 3996 aa10.23□□□□□ -0.77
SDCBP-202ENST00000413219 ALMS1Q8TCU4 4167 aa10.22□□□□□ -0.77
SDCBP-202ENST00000413219 LINC00313P59037 77 aa10.21□□□□□ -0.77
SDCBP-202ENST00000413219 IGKV2-30P06310 120 aa10.18□□□□□ -0.78
SDCBP-202ENST00000413219 FRAS1Q86XX4 4008 aa10.13□□□□□ -0.79
SDCBP-202ENST00000413219 C1orf134Q5TEV5 83 aa10.13□□□□□ -0.79
SDCBP-202ENST00000413219 A0A1B0GU69 56 aa10.12□□□□□ -0.79
SDCBP-202ENST00000413219 PRKDCP78527 4128 aaKnown RBP10.1□□□□□ -0.79
SDCBP-202ENST00000413219 STARD9Q9P2P6 4700 aa10.1□□□□□ -0.79
SDCBP-202ENST00000413219 KRTAP16-1A8MUX0 517 aa10.08□□□□□ -0.8
SDCBP-202ENST00000413219 SPATA8Q6RVD6 105 aa10.08□□□□□ -0.8
SDCBP-202ENST00000413219 DNAH2Q9P225 4427 aa10.07□□□□□ -0.8
SDCBP-202ENST00000413219 RETNLBQ9BQ08 111 aa10.06□□□□□ -0.8
SDCBP-202ENST00000413219 KRTAP13-2Q52LG2 175 aa10.05□□□□□ -0.8
SDCBP-202ENST00000413219 FBN3Q75N90 2809 aa10.01□□□□□ -0.81
SDCBP-202ENST00000413219 PLA2G1BP04054 148 aaKnown RBP10□□□□□ -0.81
SDCBP-202ENST00000413219 UQCR11O14957 56 aa10□□□□□ -0.81
SDCBP-202ENST00000413219 MIR22HGQ0VDD5 57 aa9.98□□□□□ -0.81
SDCBP-202ENST00000413219 IGKV2D-30A0A075B6S6 120 aa9.95□□□□□ -0.82
SDCBP-202ENST00000413219 KMT2AQ03164 3969 aa9.95□□□□□ -0.82
SDCBP-202ENST00000413219 MEGF8Q7Z7M0 2845 aa9.94□□□□□ -0.82
SDCBP-202ENST00000413219 KRTAP10-2P60368 255 aa9.93□□□□□ -0.82
SDCBP-202ENST00000413219 Q6ZSA8 131 aa9.92□□□□□ -0.82
SDCBP-202ENST00000413219 DNAH11Q96DT5 4516 aa9.91□□□□□ -0.82
SDCBP-202ENST00000413219 KRTAP1-4P0C5Y4 121 aa9.91□□□□□ -0.82
SDCBP-202ENST00000413219 PRAC1Q96KF2 57 aa9.89□□□□□ -0.83
SDCBP-202ENST00000413219 LY6G6CO95867 125 aa9.89□□□□□ -0.83
SDCBP-202ENST00000413219 DNAH6Q9C0G6 4158 aa9.86□□□□□ -0.83
SDCBP-202ENST00000413219 C4orf48Q5BLP8 95 aa9.84□□□□□ -0.83
SDCBP-202ENST00000413219 DNAH5Q8TE73 4624 aa9.84□□□□□ -0.83
SDCBP-202ENST00000413219 ADM2Q7Z4H4 148 aa9.84□□□□□ -0.83
SDCBP-202ENST00000413219 TGP01266 2768 aa9.84□□□□□ -0.83
SDCBP-202ENST00000413219 SPINK1P00995 79 aa9.83□□□□□ -0.84
SDCBP-202ENST00000413219 KRTAP10-1P60331 282 aa9.83□□□□□ -0.84
SDCBP-202ENST00000413219 TYMSOSQ8TAI1 123 aa9.78□□□□□ -0.84
SDCBP-202ENST00000413219 LINC01554Q52M75 96 aa9.75□□□□□ -0.85
SDCBP-202ENST00000413219 LRP1BQ9NZR2 4599 aa9.74□□□□□ -0.85
SDCBP-202ENST00000413219 RPS29P62273 56 aaKnown RBP9.73□□□□□ -0.85
SDCBP-202ENST00000413219 Q8N1X5 172 aa9.71□□□□□ -0.86
SDCBP-202ENST00000413219 PKD1P98161 4303 aa9.66□□□□□ -0.86
SDCBP-202ENST00000413219 LINC00304Q8N9R0 145 aa9.65□□□□□ -0.86
SDCBP-202ENST00000413219 CSAG1Q6PB30 78 aa9.61□□□□□ -0.87
SDCBP-202ENST00000413219 VPS13BQ7Z7G8 4022 aa9.59□□□□□ -0.87
SDCBP-202ENST00000413219 A8MUU9 505 aa9.59□□□□□ -0.87
SDCBP-202ENST00000413219 C20orf166-AS1Q96NR2 134 aa9.58□□□□□ -0.88
SDCBP-202ENST00000413219 FAT2Q9NYQ8 4349 aa9.58□□□□□ -0.88
SDCBP-202ENST00000413219 H0YAA0 97 aa9.57□□□□□ -0.88
SDCBP-202ENST00000413219 SACSQ9NZJ4 4579 aa9.52□□□□□ -0.88
SDCBP-202ENST00000413219 A0A1B0GU33 70 aa9.51□□□□□ -0.89
SDCBP-202ENST00000413219 KRTAP3-1Q9BYR8 98 aa9.51□□□□□ -0.89
SDCBP-202ENST00000413219 H1FX-AS1Q4G0G2 97 aa9.48□□□□□ -0.89
SDCBP-202ENST00000413219 C9orf92A6NGG3 77 aa9.46□□□□□ -0.9
SDCBP-202ENST00000413219 KRTAP25-1Q3LHN0 102 aa9.38□□□□□ -0.91
SDCBP-202ENST00000413219 HYDINQ4G0P3 5121 aa9.37□□□□□ -0.91
SDCBP-202ENST00000413219 COX6B2Q6YFQ2 88 aa9.36□□□□□ -0.91
SDCBP-202ENST00000413219 PKHD1L1Q86WI1 4243 aa9.34□□□□□ -0.91
SDCBP-202ENST00000413219 K7ERS5 55 aa9.31□□□□□ -0.92
SDCBP-202ENST00000413219 DNHD1Q96M86 4753 aa9.3□□□□□ -0.92
SDCBP-202ENST00000413219 SMR3BP02814 79 aaPredicted RBP9.29□□□□□ -0.92
SDCBP-202ENST00000413219 KRTAP10-4P60372 401 aaPredicted RBP9.28□□□□□ -0.92
SDCBP-202ENST00000413219 APOBP04114 4563 aaKnown RBP9.22□□□□□ -0.93
SDCBP-202ENST00000413219 PKHD1P08F94 4074 aa9.21□□□□□ -0.94
SDCBP-202ENST00000413219 DYNC1H1Q14204 4646 aaKnown RBP9.19□□□□□ -0.94
SDCBP-202ENST00000413219 A0A1B0GVY2 172 aa9.16□□□□□ -0.94
SDCBP-202ENST00000413219 ROMO1P60602 79 aa9.14□□□□□ -0.95
SDCBP-202ENST00000413219 KRTAP10-6P60371 365 aaPredicted RBP9.12□□□□□ -0.95
SDCBP-202ENST00000413219 H3BS24 57 aa9.11□□□□□ -0.95
SDCBP-202ENST00000413219 RPL37P61927 97 aaKnown RBP9.11□□□□□ -0.95
SDCBP-202ENST00000413219 KRTAP3-3Q9BYR6 98 aa9.1□□□□□ -0.95
SDCBP-202ENST00000413219 FAT1Q14517 4588 aa9.08□□□□□ -0.96
SDCBP-202ENST00000413219 FLG2Q5D862 2391 aaPredicted RBP9.04□□□□□ -0.96
SDCBP-202ENST00000413219 KRTAP3-2Q9BYR7 98 aa9.03□□□□□ -0.96
SDCBP-202ENST00000413219 CRIPTQ9P021 101 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms