RNA–Protein interactions for RNA: ENST00000405409.6

RBFOX2-205, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 1 (best) BASIC

Gene RBFOX2, Length 6,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-205ENST00000405409 KALRNO60229 2985 aa4.15□□□□□ -1.75
RBFOX2-205ENST00000405409 VPS13AQ96RL7 3174 aa4.14□□□□□ -1.75
RBFOX2-205ENST00000405409 KRTAP10-10P60014 251 aa4.14□□□□□ -1.75
RBFOX2-205ENST00000405409 FRYQ5TBA9 3013 aa4.13□□□□□ -1.75
RBFOX2-205ENST00000405409 TACC2O95359 2948 aa4.13□□□□□ -1.75
RBFOX2-205ENST00000405409 BRCA2P51587 3418 aa4.13□□□□□ -1.75
RBFOX2-205ENST00000405409 FBN2P35556 2912 aa4.12□□□□□ -1.75
RBFOX2-205ENST00000405409 ZZEF1O43149 2961 aa4.12□□□□□ -1.75
RBFOX2-205ENST00000405409 MUC3AQ02505 3323 aa4.12□□□□□ -1.75
RBFOX2-205ENST00000405409 DMXL2Q8TDJ6 3036 aa4.12□□□□□ -1.75
RBFOX2-205ENST00000405409 FRYLO94915 3013 aa4.11□□□□□ -1.75
RBFOX2-205ENST00000405409 MKI67P46013 3256 aaKnown RBP4.11□□□□□ -1.75
RBFOX2-205ENST00000405409 REV3LO60673 3130 aa4.11□□□□□ -1.75
RBFOX2-205ENST00000405409 MGAQ8IWI9 3026 aa4.11□□□□□ -1.75
RBFOX2-205ENST00000405409 XP32Q5T750 250 aa4.11□□□□□ -1.75
RBFOX2-205ENST00000405409 BOD1L1Q8NFC6 3051 aa4.1□□□□□ -1.75
RBFOX2-205ENST00000405409 EYSQ5T1H1 3165 aa4.09□□□□□ -1.75
RBFOX2-205ENST00000405409 PRUNE2Q8WUY3 3088 aa4.09□□□□□ -1.75
RBFOX2-205ENST00000405409 ADGRG4Q8IZF6 3080 aa4.08□□□□□ -1.76
RBFOX2-205ENST00000405409 USP34Q70CQ2 3546 aa4.07□□□□□ -1.76
RBFOX2-205ENST00000405409 C5orf42Q9H799 3197 aa4.07□□□□□ -1.76
RBFOX2-205ENST00000405409 KRTAP12-2P59991 146 aa4.07□□□□□ -1.76
RBFOX2-205ENST00000405409 UNC80Q8N2C7 3258 aa4.06□□□□□ -1.76
RBFOX2-205ENST00000405409 WDFY4Q6ZS81 3184 aa4.06□□□□□ -1.76
RBFOX2-205ENST00000405409 LAMA1P25391 3075 aa4.05□□□□□ -1.76
RBFOX2-205ENST00000405409 AKAP13Q12802 2813 aa4.05□□□□□ -1.76
RBFOX2-205ENST00000405409 HRNRQ86YZ3 2850 aaPredicted RBP4.04□□□□□ -1.76
RBFOX2-205ENST00000405409 XIRP2A4UGR9 3374 aa4.04□□□□□ -1.76
RBFOX2-205ENST00000405409 APCP25054 2843 aa3.99□□□□□ -1.77
RBFOX2-205ENST00000405409 DNAH14Q0VDD8 3507 aa3.99□□□□□ -1.77
RBFOX2-205ENST00000405409 ATMQ13315 3056 aa3.97□□□□□ -1.77
RBFOX2-205ENST00000405409 CDH23Q9H251 3354 aa3.96□□□□□ -1.77
RBFOX2-205ENST00000405409 SZT2Q5T011 3432 aa3.96□□□□□ -1.78
RBFOX2-205ENST00000405409 KRTAP13-4Q3LI77 160 aa3.96□□□□□ -1.78
RBFOX2-205ENST00000405409 KRTAP15-1Q3LI76 137 aa3.95□□□□□ -1.78
RBFOX2-205ENST00000405409 TPRXLQ17RH7 258 aa3.95□□□□□ -1.78
RBFOX2-205ENST00000405409 KRTAP1-4P0C5Y4 121 aa3.95□□□□□ -1.78
RBFOX2-205ENST00000405409 VWFP04275 2813 aa3.94□□□□□ -1.78
RBFOX2-205ENST00000405409 DCHS2Q6V1P9 2916 aa3.92□□□□□ -1.78
RBFOX2-205ENST00000405409 DMXL1Q9Y485 3027 aa3.91□□□□□ -1.78
RBFOX2-205ENST00000405409 TENM2Q9NT68 2774 aa3.91□□□□□ -1.78
RBFOX2-205ENST00000405409 CELSR2Q9HCU4 2923 aa3.9□□□□□ -1.79
RBFOX2-205ENST00000405409 WDFY3Q8IZQ1 3526 aa3.89□□□□□ -1.79
RBFOX2-205ENST00000405409 COL6A3P12111 3177 aa3.88□□□□□ -1.79
RBFOX2-205ENST00000405409 INE1O15225 51 aa3.88□□□□□ -1.79
RBFOX2-205ENST00000405409 TENM1Q9UKZ4 2725 aa3.88□□□□□ -1.79
RBFOX2-205ENST00000405409 LRBAP50851 2863 aa3.88□□□□□ -1.79
RBFOX2-205ENST00000405409 KRTAP13-3Q3SY46 172 aa3.88□□□□□ -1.79
RBFOX2-205ENST00000405409 KRTAP12-1P59990 96 aa3.87□□□□□ -1.79
RBFOX2-205ENST00000405409 COL12A1Q99715 3063 aa3.87□□□□□ -1.79
RBFOX2-205ENST00000405409 KRTAP17-1Q9BYP8 105 aa3.86□□□□□ -1.79
RBFOX2-205ENST00000405409 TENM3Q9P273 2699 aa3.86□□□□□ -1.79
RBFOX2-205ENST00000405409 OTOGQ6ZRI0 2925 aa3.84□□□□□ -1.79
RBFOX2-205ENST00000405409 MYO15AQ9UKN7 3530 aa3.8□□□□□ -1.8
RBFOX2-205ENST00000405409 CRCT1Q9UGL9 99 aa3.8□□□□□ -1.8
RBFOX2-205ENST00000405409 SPEGQ15772 3267 aa3.79□□□□□ -1.8
RBFOX2-205ENST00000405409 LOC400499M0QZD8 3231 aa3.79□□□□□ -1.8
RBFOX2-205ENST00000405409 ZFHX3Q15911 3703 aa3.79□□□□□ -1.8
RBFOX2-205ENST00000405409 NBEAL2Q6ZNJ1 2754 aa3.78□□□□□ -1.8
RBFOX2-205ENST00000405409 KRTAP9-6A0A140TA67 174 aa3.77□□□□□ -1.81
RBFOX2-205ENST00000405409 CFAP47Q6ZTR5 3102 aa3.76□□□□□ -1.81
RBFOX2-205ENST00000405409 PKD1L1Q8TDX9 2849 aa3.76□□□□□ -1.81
RBFOX2-205ENST00000405409 ASPMQ8IZT6 3477 aa3.73□□□□□ -1.81
RBFOX2-205ENST00000405409 PDZD2O15018 2839 aa3.72□□□□□ -1.81
RBFOX2-205ENST00000405409 KRTAP23-1A1A580 65 aa3.71□□□□□ -1.82
RBFOX2-205ENST00000405409 CRYBG3Q68DQ2 2970 aa3.71□□□□□ -1.82
RBFOX2-205ENST00000405409 FBN1P35555 2871 aaKnown RBP3.7□□□□□ -1.82
RBFOX2-205ENST00000405409 DMDP11532 3685 aa3.69□□□□□ -1.82
RBFOX2-205ENST00000405409 ZFHX4Q86UP3 3567 aa3.65□□□□□ -1.82
RBFOX2-205ENST00000405409 CELSR3Q9NYQ7 3312 aa3.64□□□□□ -1.83
RBFOX2-205ENST00000405409 KRTAP3-1Q9BYR8 98 aa3.64□□□□□ -1.83
RBFOX2-205ENST00000405409 TGP01266 2768 aa3.63□□□□□ -1.83
RBFOX2-205ENST00000405409 BIRC6Q9NR09 4857 aa3.63□□□□□ -1.83
RBFOX2-205ENST00000405409 KRTAP10-12P60413 245 aa3.6□□□□□ -1.83
RBFOX2-205ENST00000405409 SPTBN5Q9NRC6 3674 aaKnown RBP3.59□□□□□ -1.83
RBFOX2-205ENST00000405409 KRTAP10-6P60371 365 aaPredicted RBP3.58□□□□□ -1.84
RBFOX2-205ENST00000405409 CELSR1Q9NYQ6 3014 aa3.57□□□□□ -1.84
RBFOX2-205ENST00000405409 KRTAP9-2Q9BYQ4 174 aa3.56□□□□□ -1.84
RBFOX2-205ENST00000405409 DCHS1Q96JQ0 3298 aa3.56□□□□□ -1.84
RBFOX2-205ENST00000405409 KRTAP10-5P60370 271 aa3.52□□□□□ -1.85
RBFOX2-205ENST00000405409 KRTAP12-3P60328 96 aa3.49□□□□□ -1.85
RBFOX2-205ENST00000405409 LCE3AQ5TA76 89 aa3.48□□□□□ -1.85
RBFOX2-205ENST00000405409 LAMA5O15230 3695 aa3.47□□□□□ -1.85
RBFOX2-205ENST00000405409 CSMD2Q7Z408 3487 aa3.46□□□□□ -1.85
RBFOX2-205ENST00000405409 KRTAP4-5Q9BYR2 181 aa3.46□□□□□ -1.86
RBFOX2-205ENST00000405409 SRRM2Q9UQ35 2752 aaKnown RBP3.43□□□□□ -1.86
RBFOX2-205ENST00000405409 RELNP78509 3460 aa3.42□□□□□ -1.86
RBFOX2-205ENST00000405409 LCE2DQ5TA82 110 aaPredicted RBP3.42□□□□□ -1.86
RBFOX2-205ENST00000405409 KRTAP3-2Q9BYR7 98 aa3.4□□□□□ -1.86
RBFOX2-205ENST00000405409 KRTAP3-3Q9BYR6 98 aa3.38□□□□□ -1.87
RBFOX2-205ENST00000405409 SMG1Q96Q15 3661 aaKnown RBP3.38□□□□□ -1.87
RBFOX2-205ENST00000405409 KRTAP9-7A8MTY7 169 aa3.37□□□□□ -1.87
RBFOX2-205ENST00000405409 DNHD1Q96M86 4753 aa3.37□□□□□ -1.87
RBFOX2-205ENST00000405409 PCLOQ9Y6V0 5065 aa3.34□□□□□ -1.88
RBFOX2-205ENST00000405409 MEGF8Q7Z7M0 2845 aa3.33□□□□□ -1.88
RBFOX2-205ENST00000405409 COL7A1Q02388 2944 aa3.32□□□□□ -1.88
RBFOX2-205ENST00000405409 MT1HL1P0DM35 61 aa3.3□□□□□ -1.88
RBFOX2-205ENST00000405409 KRTAP8-1Q8IUC2 63 aa3.28□□□□□ -1.88
RBFOX2-205ENST00000405409 HERC2O95714 4834 aa3.27□□□□□ -1.89
RBFOX2-205ENST00000405409 LCE2CQ5TA81 110 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms