RNA–Protein interactions for RNA: ENST00000399537.8

TNRC18-203, Transcript of trinucleotide repeat containing 18, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNRC18, Length 10,572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-203ENST00000399537 KRTAP25-1Q3LHN0 102 aa8.32□□□□□ -1.08
TNRC18-203ENST00000399537 VWFP04275 2813 aa8.31□□□□□ -1.08
TNRC18-203ENST00000399537 FREM2Q5SZK8 3169 aa8.31□□□□□ -1.08
TNRC18-203ENST00000399537 NOTCH2NLQ7Z3S9 236 aa8.29□□□□□ -1.08
TNRC18-203ENST00000399537 A8MUU9 505 aa8.28□□□□□ -1.08
TNRC18-203ENST00000399537 A8MU10 97 aa8.25□□□□□ -1.09
TNRC18-203ENST00000399537 LAMA1P25391 3075 aa8.25□□□□□ -1.09
TNRC18-203ENST00000399537 PKD1L1Q8TDX9 2849 aa8.24□□□□□ -1.09
TNRC18-203ENST00000399537 MXRA5Q9NR99 2828 aa8.21□□□□□ -1.09
TNRC18-203ENST00000399537 MKI67P46013 3256 aaKnown RBP8.21□□□□□ -1.1
TNRC18-203ENST00000399537 NDUFAF8A1L188 74 aa8.19□□□□□ -1.1
TNRC18-203ENST00000399537 RPS29P62273 56 aaKnown RBP8.18□□□□□ -1.1
TNRC18-203ENST00000399537 ATMQ13315 3056 aa8.18□□□□□ -1.1
TNRC18-203ENST00000399537 KRTAP11-1Q8IUC1 163 aa8.15□□□□□ -1.11
TNRC18-203ENST00000399537 LAMA3Q16787 3333 aa8.14□□□□□ -1.11
TNRC18-203ENST00000399537 BOD1L1Q8NFC6 3051 aa8.13□□□□□ -1.11
TNRC18-203ENST00000399537 C10orf95Q9H7T3 257 aa8.13□□□□□ -1.11
TNRC18-203ENST00000399537 SRRM2Q9UQ35 2752 aaKnown RBP8.09□□□□□ -1.11
TNRC18-203ENST00000399537 REV3LO60673 3130 aa8.08□□□□□ -1.12
TNRC18-203ENST00000399537 BRCA2P51587 3418 aa8.08□□□□□ -1.12
TNRC18-203ENST00000399537 XIRP2A4UGR9 3374 aa8.05□□□□□ -1.12
TNRC18-203ENST00000399537 TNP1P09430 55 aa8.04□□□□□ -1.12
TNRC18-203ENST00000399537 COL6A3P12111 3177 aa8.04□□□□□ -1.12
TNRC18-203ENST00000399537 KRTAP7-1Q8IUC3 87 aa8.04□□□□□ -1.12
TNRC18-203ENST00000399537 KRTAP13-2Q52LG2 175 aa8.03□□□□□ -1.12
TNRC18-203ENST00000399537 ADGRG4Q8IZF6 3080 aa8.01□□□□□ -1.13
TNRC18-203ENST00000399537 Q6ZRN7 208 aaPredicted RBP8□□□□□ -1.13
TNRC18-203ENST00000399537 KRTAP13-1Q8IUC0 172 aa7.98□□□□□ -1.13
TNRC18-203ENST00000399537 TENM2Q9NT68 2774 aa7.96□□□□□ -1.13
TNRC18-203ENST00000399537 CELSR3Q9NYQ7 3312 aa7.92□□□□□ -1.14
TNRC18-203ENST00000399537 DMXL1Q9Y485 3027 aa7.91□□□□□ -1.14
TNRC18-203ENST00000399537 PP632Q6XCG6 107 aa7.91□□□□□ -1.14
TNRC18-203ENST00000399537 CELSR1Q9NYQ6 3014 aa7.89□□□□□ -1.15
TNRC18-203ENST00000399537 USP34Q70CQ2 3546 aa7.85□□□□□ -1.15
TNRC18-203ENST00000399537 UNC80Q8N2C7 3258 aa7.81□□□□□ -1.16
TNRC18-203ENST00000399537 KRTAP10-8P60410 259 aa7.79□□□□□ -1.16
TNRC18-203ENST00000399537 COL7A1Q02388 2944 aa7.71□□□□□ -1.17
TNRC18-203ENST00000399537 H0YAA0 97 aa7.71□□□□□ -1.17
TNRC18-203ENST00000399537 FBN1P35555 2871 aaKnown RBP7.7□□□□□ -1.18
TNRC18-203ENST00000399537 A0A1B0GVY2 172 aa7.69□□□□□ -1.18
TNRC18-203ENST00000399537 CFAP47Q6ZTR5 3102 aa7.69□□□□□ -1.18
TNRC18-203ENST00000399537 DNAH14Q0VDD8 3507 aa7.68□□□□□ -1.18
TNRC18-203ENST00000399537 CDH23Q9H251 3354 aa7.67□□□□□ -1.18
TNRC18-203ENST00000399537 XP32Q5T750 250 aa7.66□□□□□ -1.18
TNRC18-203ENST00000399537 VCANP13611 3396 aa7.65□□□□□ -1.18
TNRC18-203ENST00000399537 P0C880 135 aa7.63□□□□□ -1.19
TNRC18-203ENST00000399537 PRO2289Q9P1D8 64 aa7.58□□□□□ -1.2
TNRC18-203ENST00000399537 SPTBN5Q9NRC6 3674 aaKnown RBP7.56□□□□□ -1.2
TNRC18-203ENST00000399537 FBN3Q75N90 2809 aa7.56□□□□□ -1.2
TNRC18-203ENST00000399537 KRTAP10-10P60014 251 aa7.55□□□□□ -1.2
TNRC18-203ENST00000399537 MYO15AQ9UKN7 3530 aa7.53□□□□□ -1.2
TNRC18-203ENST00000399537 MEGF8Q7Z7M0 2845 aa7.52□□□□□ -1.21
TNRC18-203ENST00000399537 EYSQ5T1H1 3165 aa7.52□□□□□ -1.21
TNRC18-203ENST00000399537 SZT2Q5T011 3432 aa7.51□□□□□ -1.21
TNRC18-203ENST00000399537 KRTAP1-4P0C5Y4 121 aa7.51□□□□□ -1.21
TNRC18-203ENST00000399537 TPRXLQ17RH7 258 aa7.49□□□□□ -1.21
TNRC18-203ENST00000399537 KRTAP21-3Q3LHN1 58 aa7.43□□□□□ -1.22
TNRC18-203ENST00000399537 SPEGQ15772 3267 aa7.4□□□□□ -1.23
TNRC18-203ENST00000399537 KRTAP13-3Q3SY46 172 aa7.33□□□□□ -1.24
TNRC18-203ENST00000399537 OTOGQ6ZRI0 2925 aa7.24□□□□□ -1.25
TNRC18-203ENST00000399537 WDFY3Q8IZQ1 3526 aa7.23□□□□□ -1.25
TNRC18-203ENST00000399537 KRTAP12-2P59991 146 aa7.21□□□□□ -1.26
TNRC18-203ENST00000399537 DMDP11532 3685 aa7.2□□□□□ -1.26
TNRC18-203ENST00000399537 NBPF19A0A087WUL8 3843 aa7.18□□□□□ -1.26
TNRC18-203ENST00000399537 ZFHX3Q15911 3703 aa7.17□□□□□ -1.26
TNRC18-203ENST00000399537 LOC400499M0QZD8 3231 aa7.14□□□□□ -1.27
TNRC18-203ENST00000399537 KRTAP13-4Q3LI77 160 aa7.13□□□□□ -1.27
TNRC18-203ENST00000399537 INE1O15225 51 aa7.11□□□□□ -1.27
TNRC18-203ENST00000399537 SMG1Q96Q15 3661 aaKnown RBP7.11□□□□□ -1.27
TNRC18-203ENST00000399537 SPENQ96T58 3664 aaKnown RBP7.02□□□□□ -1.29
TNRC18-203ENST00000399537 ZFHX4Q86UP3 3567 aa7.02□□□□□ -1.29
TNRC18-203ENST00000399537 DCHS1Q96JQ0 3298 aa7.02□□□□□ -1.29
TNRC18-203ENST00000399537 KRTAP12-1P59990 96 aa7□□□□□ -1.29
TNRC18-203ENST00000399537 KRTAP15-1Q3LI76 137 aa7□□□□□ -1.29
TNRC18-203ENST00000399537 TRRAPQ9Y4A5 3859 aa6.95□□□□□ -1.3
TNRC18-203ENST00000399537 LAMA5O15230 3695 aa6.93□□□□□ -1.3
TNRC18-203ENST00000399537 VPS13CQ709C8 3753 aa6.89□□□□□ -1.31
TNRC18-203ENST00000399537 RELNP78509 3460 aa6.86□□□□□ -1.31
TNRC18-203ENST00000399537 KRTAP3-1Q9BYR8 98 aa6.83□□□□□ -1.32
TNRC18-203ENST00000399537 ASPMQ8IZT6 3477 aa6.77□□□□□ -1.32
TNRC18-203ENST00000399537 CSMD1Q96PZ7 3565 aa6.77□□□□□ -1.33
TNRC18-203ENST00000399537 KRTAP10-6P60371 365 aaPredicted RBP6.73□□□□□ -1.33
TNRC18-203ENST00000399537 AKAP9Q99996 3911 aa6.68□□□□□ -1.34
TNRC18-203ENST00000399537 CRCT1Q9UGL9 99 aa6.62□□□□□ -1.35
TNRC18-203ENST00000399537 KRTAP10-12P60413 245 aa6.59□□□□□ -1.35
TNRC18-203ENST00000399537 KRTAP23-1A1A580 65 aa6.51□□□□□ -1.37
TNRC18-203ENST00000399537 SVEP1Q4LDE5 3571 aa6.49□□□□□ -1.37
TNRC18-203ENST00000399537 KRTAP3-2Q9BYR7 98 aa6.48□□□□□ -1.37
TNRC18-203ENST00000399537 KRTAP3-3Q9BYR6 98 aa6.42□□□□□ -1.38
TNRC18-203ENST00000399537 CUBNO60494 3623 aa6.41□□□□□ -1.38
TNRC18-203ENST00000399537 CSMD3Q7Z407 3707 aa6.4□□□□□ -1.38
TNRC18-203ENST00000399537 KRTAP12-3P60328 96 aa6.35□□□□□ -1.39
TNRC18-203ENST00000399537 MUC3AQ02505 3323 aa6.34□□□□□ -1.39
TNRC18-203ENST00000399537 BSNQ9UPA5 3926 aa6.33□□□□□ -1.4
TNRC18-203ENST00000399537 MT1HL1P0DM35 61 aa6.27□□□□□ -1.41
TNRC18-203ENST00000399537 ALMS1Q8TCU4 4167 aa6.23□□□□□ -1.41
TNRC18-203ENST00000399537 LCE3AQ5TA76 89 aa6.21□□□□□ -1.41
TNRC18-203ENST00000399537 LYSTQ99698 3801 aa6.19□□□□□ -1.42
TNRC18-203ENST00000399537 KRTAP10-5P60370 271 aa6.13□□□□□ -1.43
TNRC18-203ENST00000399537 CSMD2Q7Z408 3487 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms