RNA–Protein interactions for RNA: ENST00000395715.7

TRPS1-203, Transcript of transcriptional repressor GATA binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPS1, Length 9,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-203ENST00000395715 XP32Q5T750 250 aa4.1□□□□□ -1.75
TRPS1-203ENST00000395715 ITPR1Q14643 2758 aa4.09□□□□□ -1.76
TRPS1-203ENST00000395715 KRTAP13-4Q3LI77 160 aa4.08□□□□□ -1.76
TRPS1-203ENST00000395715 LAMA3Q16787 3333 aa4.08□□□□□ -1.76
TRPS1-203ENST00000395715 PRUNE2Q8WUY3 3088 aa4.07□□□□□ -1.76
TRPS1-203ENST00000395715 LRBAP50851 2863 aa4.06□□□□□ -1.76
TRPS1-203ENST00000395715 DNAH14Q0VDD8 3507 aa4.06□□□□□ -1.76
TRPS1-203ENST00000395715 KRTAP15-1Q3LI76 137 aa4.05□□□□□ -1.76
TRPS1-203ENST00000395715 NBEAQ8NFP9 2946 aa4.04□□□□□ -1.76
TRPS1-203ENST00000395715 FLNCQ14315 2725 aa4.04□□□□□ -1.76
TRPS1-203ENST00000395715 VPS13AQ96RL7 3174 aa4.04□□□□□ -1.76
TRPS1-203ENST00000395715 BRCA2P51587 3418 aa4.03□□□□□ -1.76
TRPS1-203ENST00000395715 COL6A3P12111 3177 aa4.03□□□□□ -1.76
TRPS1-203ENST00000395715 TPRXLQ17RH7 258 aa4.02□□□□□ -1.77
TRPS1-203ENST00000395715 KRTAP21-3Q3LHN1 58 aa4.01□□□□□ -1.77
TRPS1-203ENST00000395715 SPEGQ15772 3267 aa4.01□□□□□ -1.77
TRPS1-203ENST00000395715 ASH1LQ9NR48 2969 aaKnown RBP4□□□□□ -1.77
TRPS1-203ENST00000395715 KALRNO60229 2985 aa4□□□□□ -1.77
TRPS1-203ENST00000395715 MAP1AP78559 2803 aaPredicted RBP3.99□□□□□ -1.77
TRPS1-203ENST00000395715 CFAP47Q6ZTR5 3102 aa3.97□□□□□ -1.77
TRPS1-203ENST00000395715 COL12A1Q99715 3063 aa3.96□□□□□ -1.78
TRPS1-203ENST00000395715 CDH23Q9H251 3354 aa3.95□□□□□ -1.78
TRPS1-203ENST00000395715 KRTAP12-1P59990 96 aa3.95□□□□□ -1.78
TRPS1-203ENST00000395715 USP34Q70CQ2 3546 aa3.93□□□□□ -1.78
TRPS1-203ENST00000395715 TGP01266 2768 aa3.93□□□□□ -1.78
TRPS1-203ENST00000395715 VCANP13611 3396 aa3.92□□□□□ -1.78
TRPS1-203ENST00000395715 SZT2Q5T011 3432 aa3.92□□□□□ -1.78
TRPS1-203ENST00000395715 TACC2O95359 2948 aa3.92□□□□□ -1.78
TRPS1-203ENST00000395715 TNRC18O15417 2968 aaPredicted RBP3.91□□□□□ -1.78
TRPS1-203ENST00000395715 KRTAP1-4P0C5Y4 121 aa3.9□□□□□ -1.79
TRPS1-203ENST00000395715 TENM3Q9P273 2699 aa3.9□□□□□ -1.79
TRPS1-203ENST00000395715 DMXL2Q8TDJ6 3036 aa3.9□□□□□ -1.79
TRPS1-203ENST00000395715 LAMA1P25391 3075 aa3.89□□□□□ -1.79
TRPS1-203ENST00000395715 FRYLO94915 3013 aa3.89□□□□□ -1.79
TRPS1-203ENST00000395715 NIPBLQ6KC79 2804 aaeCLIP3.85□□□□□ -1.79
TRPS1-203ENST00000395715 KRTAP13-3Q3SY46 172 aa3.85□□□□□ -1.79
TRPS1-203ENST00000395715 HIVEP1P15822 2718 aa3.85□□□□□ -1.79
TRPS1-203ENST00000395715 ATMQ13315 3056 aa3.84□□□□□ -1.79
TRPS1-203ENST00000395715 MXRA5Q9NR99 2828 aa3.84□□□□□ -1.8
TRPS1-203ENST00000395715 NBPF19A0A087WUL8 3843 aa3.83□□□□□ -1.8
TRPS1-203ENST00000395715 NF1P21359 2839 aa3.82□□□□□ -1.8
TRPS1-203ENST00000395715 HRNRQ86YZ3 2850 aaPredicted RBP3.82□□□□□ -1.8
TRPS1-203ENST00000395715 CRCT1Q9UGL9 99 aa3.82□□□□□ -1.8
TRPS1-203ENST00000395715 ZANQ9Y493 2812 aa3.82□□□□□ -1.8
TRPS1-203ENST00000395715 TENM1Q9UKZ4 2725 aa3.82□□□□□ -1.8
TRPS1-203ENST00000395715 BOD1L1Q8NFC6 3051 aa3.81□□□□□ -1.8
TRPS1-203ENST00000395715 ZZEF1O43149 2961 aa3.8□□□□□ -1.8
TRPS1-203ENST00000395715 SRRM2Q9UQ35 2752 aaKnown RBP3.8□□□□□ -1.8
TRPS1-203ENST00000395715 KRTAP23-1A1A580 65 aa3.8□□□□□ -1.8
TRPS1-203ENST00000395715 ADGRG4Q8IZF6 3080 aa3.77□□□□□ -1.81
TRPS1-203ENST00000395715 ASPMQ8IZT6 3477 aa3.76□□□□□ -1.81
TRPS1-203ENST00000395715 ZFHX4Q86UP3 3567 aa3.76□□□□□ -1.81
TRPS1-203ENST00000395715 CELSR2Q9HCU4 2923 aa3.73□□□□□ -1.81
TRPS1-203ENST00000395715 LOC400499M0QZD8 3231 aa3.73□□□□□ -1.81
TRPS1-203ENST00000395715 SPTBN5Q9NRC6 3674 aaKnown RBP3.73□□□□□ -1.81
TRPS1-203ENST00000395715 CELSR1Q9NYQ6 3014 aa3.73□□□□□ -1.81
TRPS1-203ENST00000395715 PDZD2O15018 2839 aa3.71□□□□□ -1.82
TRPS1-203ENST00000395715 DMXL1Q9Y485 3027 aa3.7□□□□□ -1.82
TRPS1-203ENST00000395715 WDFY3Q8IZQ1 3526 aa3.67□□□□□ -1.82
TRPS1-203ENST00000395715 KRTAP10-12P60413 245 aa3.67□□□□□ -1.82
TRPS1-203ENST00000395715 DCHS1Q96JQ0 3298 aa3.67□□□□□ -1.82
TRPS1-203ENST00000395715 EYSQ5T1H1 3165 aa3.65□□□□□ -1.83
TRPS1-203ENST00000395715 TENM4Q6N022 2769 aa3.65□□□□□ -1.83
TRPS1-203ENST00000395715 DCHS2Q6V1P9 2916 aa3.63□□□□□ -1.83
TRPS1-203ENST00000395715 KRTAP10-6P60371 365 aaPredicted RBP3.63□□□□□ -1.83
TRPS1-203ENST00000395715 KRTAP10-5P60370 271 aa3.62□□□□□ -1.83
TRPS1-203ENST00000395715 VWFP04275 2813 aa3.62□□□□□ -1.83
TRPS1-203ENST00000395715 MYO15AQ9UKN7 3530 aa3.62□□□□□ -1.83
TRPS1-203ENST00000395715 KRTAP3-1Q9BYR8 98 aa3.61□□□□□ -1.83
TRPS1-203ENST00000395715 ZFHX3Q15911 3703 aa3.61□□□□□ -1.83
TRPS1-203ENST00000395715 LAMA5O15230 3695 aa3.61□□□□□ -1.83
TRPS1-203ENST00000395715 TENM2Q9NT68 2774 aa3.6□□□□□ -1.83
TRPS1-203ENST00000395715 FBN2P35556 2912 aa3.6□□□□□ -1.83
TRPS1-203ENST00000395715 KRTAP12-3P60328 96 aa3.58□□□□□ -1.84
TRPS1-203ENST00000395715 PKD1L1Q8TDX9 2849 aa3.53□□□□□ -1.84
TRPS1-203ENST00000395715 CSMD1Q96PZ7 3565 aa3.53□□□□□ -1.84
TRPS1-203ENST00000395715 SPENQ96T58 3664 aaKnown RBP3.49□□□□□ -1.85
TRPS1-203ENST00000395715 LCE3AQ5TA76 89 aa3.48□□□□□ -1.85
TRPS1-203ENST00000395715 RELNP78509 3460 aa3.45□□□□□ -1.86
TRPS1-203ENST00000395715 SMG1Q96Q15 3661 aaKnown RBP3.42□□□□□ -1.86
TRPS1-203ENST00000395715 DMDP11532 3685 aa3.4□□□□□ -1.86
TRPS1-203ENST00000395715 KRTAP3-2Q9BYR7 98 aa3.4□□□□□ -1.87
TRPS1-203ENST00000395715 MUC3AQ02505 3323 aa3.39□□□□□ -1.87
TRPS1-203ENST00000395715 MEGF8Q7Z7M0 2845 aa3.39□□□□□ -1.87
TRPS1-203ENST00000395715 OTOGQ6ZRI0 2925 aa3.38□□□□□ -1.87
TRPS1-203ENST00000395715 LORP23490 312 aaPredicted RBP3.36□□□□□ -1.87
TRPS1-203ENST00000395715 KRTAP3-3Q9BYR6 98 aa3.36□□□□□ -1.87
TRPS1-203ENST00000395715 COL7A1Q02388 2944 aa3.36□□□□□ -1.87
TRPS1-203ENST00000395715 KRTAP10-7P60409 375 aaPredicted RBP3.34□□□□□ -1.87
TRPS1-203ENST00000395715 KRTAP8-1Q8IUC2 63 aa3.32□□□□□ -1.88
TRPS1-203ENST00000395715 KRTAP4-5Q9BYR2 181 aa3.27□□□□□ -1.89
TRPS1-203ENST00000395715 VPS13CQ709C8 3753 aa3.26□□□□□ -1.89
TRPS1-203ENST00000395715 FBN1P35555 2871 aaKnown RBP3.25□□□□□ -1.89
TRPS1-203ENST00000395715 BSNQ9UPA5 3926 aa3.25□□□□□ -1.89
TRPS1-203ENST00000395715 TRRAPQ9Y4A5 3859 aa3.25□□□□□ -1.89
TRPS1-203ENST00000395715 MT1HL1P0DM35 61 aa3.25□□□□□ -1.89
TRPS1-203ENST00000395715 FBN3Q75N90 2809 aa3.23□□□□□ -1.89
TRPS1-203ENST00000395715 SVEP1Q4LDE5 3571 aa3.22□□□□□ -1.89
TRPS1-203ENST00000395715 ALMS1Q8TCU4 4167 aa3.22□□□□□ -1.89
TRPS1-203ENST00000395715 CUBNO60494 3623 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms