RNA–Protein interactions for RNA: ENST00000394196.8

CHD2-201, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD2, Length 9,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-201ENST00000394196 HIVEP1P15822 2718 aa4.92□□□□□ -1.62
CHD2-201ENST00000394196 PRUNE2Q8WUY3 3088 aa4.91□□□□□ -1.62
CHD2-201ENST00000394196 CHD7Q9P2D1 2997 aa4.9□□□□□ -1.62
CHD2-201ENST00000394196 NIPBLQ6KC79 2804 aaeCLIP4.9□□□□□ -1.633e-7■□□□□ 10
CHD2-201ENST00000394196 TENM1Q9UKZ4 2725 aa4.89□□□□□ -1.63
CHD2-201ENST00000394196 DNAH14Q0VDD8 3507 aa4.87□□□□□ -1.63
CHD2-201ENST00000394196 KRTAP10-2P60368 255 aa4.85□□□□□ -1.63
CHD2-201ENST00000394196 DMXL1Q9Y485 3027 aa4.85□□□□□ -1.63
CHD2-201ENST00000394196 KRTAP10-8P60410 259 aa4.84□□□□□ -1.63
CHD2-201ENST00000394196 USP34Q70CQ2 3546 aa4.84□□□□□ -1.63
CHD2-201ENST00000394196 HTTP42858 3142 aa4.82□□□□□ -1.64
CHD2-201ENST00000394196 KRTAP13-2Q52LG2 175 aa4.8□□□□□ -1.64
CHD2-201ENST00000394196 KRTAP7-1Q8IUC3 87 aa4.79□□□□□ -1.64
CHD2-201ENST00000394196 PDZD2O15018 2839 aa4.78□□□□□ -1.64
CHD2-201ENST00000394196 LAMA3Q16787 3333 aa4.77□□□□□ -1.65
CHD2-201ENST00000394196 DMXL2Q8TDJ6 3036 aa4.74□□□□□ -1.65
CHD2-201ENST00000394196 COL6A3P12111 3177 aa4.74□□□□□ -1.65
CHD2-201ENST00000394196 ZZEF1O43149 2961 aa4.74□□□□□ -1.65
CHD2-201ENST00000394196 FREM2Q5SZK8 3169 aa4.74□□□□□ -1.65
CHD2-201ENST00000394196 MKI67P46013 3256 aaKnown RBP4.74□□□□□ -1.65
CHD2-201ENST00000394196 KRTAP13-4Q3LI77 160 aa4.73□□□□□ -1.65
CHD2-201ENST00000394196 KRTAP15-1Q3LI76 137 aa4.73□□□□□ -1.65
CHD2-201ENST00000394196 REV3LO60673 3130 aa4.72□□□□□ -1.65
CHD2-201ENST00000394196 CFAP47Q6ZTR5 3102 aa4.71□□□□□ -1.65
CHD2-201ENST00000394196 CRYBG3Q68DQ2 2970 aa4.71□□□□□ -1.66
CHD2-201ENST00000394196 BRCA2P51587 3418 aa4.7□□□□□ -1.66
CHD2-201ENST00000394196 UNC80Q8N2C7 3258 aa4.69□□□□□ -1.66
CHD2-201ENST00000394196 MXRA5Q9NR99 2828 aa4.69□□□□□ -1.66
CHD2-201ENST00000394196 SRRM2Q9UQ35 2752 aaKnown RBP4.69□□□□□ -1.66
CHD2-201ENST00000394196 VCANP13611 3396 aa4.69□□□□□ -1.66
CHD2-201ENST00000394196 CDH23Q9H251 3354 aa4.68□□□□□ -1.66
CHD2-201ENST00000394196 BOD1L1Q8NFC6 3051 aa4.67□□□□□ -1.66
CHD2-201ENST00000394196 ATMQ13315 3056 aa4.67□□□□□ -1.66
CHD2-201ENST00000394196 ASH1LQ9NR48 2969 aaKnown RBP4.64□□□□□ -1.67
CHD2-201ENST00000394196 ZANQ9Y493 2812 aa4.64□□□□□ -1.67
CHD2-201ENST00000394196 SPTBN5Q9NRC6 3674 aaKnown RBP4.63□□□□□ -1.67
CHD2-201ENST00000394196 COL12A1Q99715 3063 aa4.63□□□□□ -1.67
CHD2-201ENST00000394196 WDFY3Q8IZQ1 3526 aa4.63□□□□□ -1.67
CHD2-201ENST00000394196 TGP01266 2768 aa4.63□□□□□ -1.67
CHD2-201ENST00000394196 ADGRG4Q8IZF6 3080 aa4.63□□□□□ -1.67
CHD2-201ENST00000394196 DMDP11532 3685 aa4.62□□□□□ -1.67
CHD2-201ENST00000394196 TPRXLQ17RH7 258 aa4.61□□□□□ -1.67
CHD2-201ENST00000394196 KRTAP12-2P59991 146 aa4.61□□□□□ -1.67
CHD2-201ENST00000394196 HRNRQ86YZ3 2850 aaPredicted RBP4.6□□□□□ -1.67
CHD2-201ENST00000394196 WDFY4Q6ZS81 3184 aa4.59□□□□□ -1.67
CHD2-201ENST00000394196 XP32Q5T750 250 aa4.59□□□□□ -1.67
CHD2-201ENST00000394196 DCHS2Q6V1P9 2916 aa4.57□□□□□ -1.68
CHD2-201ENST00000394196 CELSR3Q9NYQ7 3312 aa4.56□□□□□ -1.68
CHD2-201ENST00000394196 KRTAP13-3Q3SY46 172 aa4.55□□□□□ -1.68
CHD2-201ENST00000394196 FBN2P35556 2912 aa4.52□□□□□ -1.69
CHD2-201ENST00000394196 KRTAP1-4P0C5Y4 121 aa4.52□□□□□ -1.69
CHD2-201ENST00000394196 TENM4Q6N022 2769 aa4.51□□□□□ -1.69
CHD2-201ENST00000394196 TENM2Q9NT68 2774 aa4.5□□□□□ -1.69
CHD2-201ENST00000394196 PKD1L1Q8TDX9 2849 aa4.5□□□□□ -1.69
CHD2-201ENST00000394196 MYO15AQ9UKN7 3530 aa4.49□□□□□ -1.69
CHD2-201ENST00000394196 SZT2Q5T011 3432 aa4.49□□□□□ -1.69
CHD2-201ENST00000394196 VWFP04275 2813 aa4.49□□□□□ -1.69
CHD2-201ENST00000394196 KRTAP12-1P59990 96 aa4.47□□□□□ -1.69
CHD2-201ENST00000394196 ASPMQ8IZT6 3477 aa4.44□□□□□ -1.7
CHD2-201ENST00000394196 LAMA5O15230 3695 aa4.43□□□□□ -1.7
CHD2-201ENST00000394196 KRTAP10-10P60014 251 aa4.42□□□□□ -1.7
CHD2-201ENST00000394196 SPENQ96T58 3664 aaKnown RBP4.42□□□□□ -1.7
CHD2-201ENST00000394196 SPEGQ15772 3267 aa4.41□□□□□ -1.7
CHD2-201ENST00000394196 OTOGQ6ZRI0 2925 aa4.41□□□□□ -1.7
CHD2-201ENST00000394196 DCHS1Q96JQ0 3298 aa4.41□□□□□ -1.7
CHD2-201ENST00000394196 LOC400499M0QZD8 3231 aa4.38□□□□□ -1.71
CHD2-201ENST00000394196 COL7A1Q02388 2944 aa4.36□□□□□ -1.71
CHD2-201ENST00000394196 EYSQ5T1H1 3165 aa4.36□□□□□ -1.71
CHD2-201ENST00000394196 CELSR1Q9NYQ6 3014 aa4.35□□□□□ -1.71
CHD2-201ENST00000394196 MEGF8Q7Z7M0 2845 aa4.35□□□□□ -1.71
CHD2-201ENST00000394196 SMG1Q96Q15 3661 aaKnown RBP4.34□□□□□ -1.71
CHD2-201ENST00000394196 A0A1B0GVY2 172 aa4.34□□□□□ -1.72
CHD2-201ENST00000394196 KRTAP21-3Q3LHN1 58 aa4.3□□□□□ -1.72
CHD2-201ENST00000394196 AKAP9Q99996 3911 aa4.29□□□□□ -1.72
CHD2-201ENST00000394196 ZFHX4Q86UP3 3567 aa4.27□□□□□ -1.73
CHD2-201ENST00000394196 CSMD1Q96PZ7 3565 aa4.23□□□□□ -1.73
CHD2-201ENST00000394196 FBN1P35555 2871 aaKnown RBP4.23□□□□□ -1.73
CHD2-201ENST00000394196 NBPF19A0A087WUL8 3843 aa4.21□□□□□ -1.74
CHD2-201ENST00000394196 KRTAP10-6P60371 365 aaPredicted RBP4.21□□□□□ -1.74
CHD2-201ENST00000394196 RELNP78509 3460 aa4.18□□□□□ -1.74
CHD2-201ENST00000394196 KRTAP3-1Q9BYR8 98 aa4.18□□□□□ -1.74
CHD2-201ENST00000394196 MUC3AQ02505 3323 aa4.16□□□□□ -1.74
CHD2-201ENST00000394196 KRTAP19-4Q3LI73 84 aa4.14□□□□□ -1.75
CHD2-201ENST00000394196 MT3P25713 68 aa4.14□□□□□ -1.75
CHD2-201ENST00000394196 SVEP1Q4LDE5 3571 aa4.14□□□□□ -1.75
CHD2-201ENST00000394196 VPS13CQ709C8 3753 aa4.13□□□□□ -1.75
CHD2-201ENST00000394196 BSNQ9UPA5 3926 aa4.07□□□□□ -1.76
CHD2-201ENST00000394196 ALMS1Q8TCU4 4167 aa4.05□□□□□ -1.76
CHD2-201ENST00000394196 CSMD2Q7Z408 3487 aa4.05□□□□□ -1.76
CHD2-201ENST00000394196 KRTAP10-12P60413 245 aa4.04□□□□□ -1.76
CHD2-201ENST00000394196 CUBNO60494 3623 aa4.02□□□□□ -1.77
CHD2-201ENST00000394196 KRTAP3-2Q9BYR7 98 aa3.99□□□□□ -1.77
CHD2-201ENST00000394196 KRTAP12-3P60328 96 aa3.98□□□□□ -1.77
CHD2-201ENST00000394196 KRTAP3-3Q9BYR6 98 aa3.93□□□□□ -1.78
CHD2-201ENST00000394196 FBN3Q75N90 2809 aa3.93□□□□□ -1.78
CHD2-201ENST00000394196 TRRAPQ9Y4A5 3859 aa3.89□□□□□ -1.79
CHD2-201ENST00000394196 KRTAP10-5P60370 271 aa3.81□□□□□ -1.8
CHD2-201ENST00000394196 LCE3AQ5TA76 89 aa3.79□□□□□ -1.8
CHD2-201ENST00000394196 LYSTQ99698 3801 aa3.73□□□□□ -1.81
CHD2-201ENST00000394196 CRCT1Q9UGL9 99 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms