RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 DNAH2Q9P225 4427 aa8.29□□□□□ -1.08
GAPVD1-205ENST00000394084 MRPL34Q9BQ48 92 aaKnown RBP8.28□□□□□ -1.08
GAPVD1-205ENST00000394084 PRKDCP78527 4128 aaKnown RBP8.28□□□□□ -1.08
GAPVD1-205ENST00000394084 TGP01266 2768 aa8.28□□□□□ -1.08
GAPVD1-205ENST00000394084 Q6ZR54 194 aa8.27□□□□□ -1.09
GAPVD1-205ENST00000394084 DNAH17Q9UFH2 4485 aa8.27□□□□□ -1.09
GAPVD1-205ENST00000394084 CHKB-CPT1BH3BT56 60 aa8.26□□□□□ -1.09
GAPVD1-205ENST00000394084 CIRBP-AS1Q8TBR5 109 aa8.26□□□□□ -1.09
GAPVD1-205ENST00000394084 LIMD2Q9BT23 127 aa8.25□□□□□ -1.09
GAPVD1-205ENST00000394084 MEGF8Q7Z7M0 2845 aa8.22□□□□□ -1.09
GAPVD1-205ENST00000394084 IGLV7-43P04211 117 aa8.22□□□□□ -1.09
GAPVD1-205ENST00000394084 C1orf134Q5TEV5 83 aa8.21□□□□□ -1.1
GAPVD1-205ENST00000394084 FBN3Q75N90 2809 aa8.2□□□□□ -1.1
GAPVD1-205ENST00000394084 SPAG11AQ6PDA7 123 aa8.2□□□□□ -1.1
GAPVD1-205ENST00000394084 Q5W150 140 aa8.19□□□□□ -1.1
GAPVD1-205ENST00000394084 LY6G6CO95867 125 aa8.17□□□□□ -1.1
GAPVD1-205ENST00000394084 HRES1P13985 223 aa8.17□□□□□ -1.1
GAPVD1-205ENST00000394084 KRTAP21-3Q3LHN1 58 aa8.16□□□□□ -1.1
GAPVD1-205ENST00000394084 A6NED7 52 aa8.15□□□□□ -1.1
GAPVD1-205ENST00000394084 Q75L30 129 aa8.13□□□□□ -1.11
GAPVD1-205ENST00000394084 LOC101927531A0A1B0GV80 90 aa8.13□□□□□ -1.11
GAPVD1-205ENST00000394084 SPTSSBQ8NFR3 76 aa8.13□□□□□ -1.11
GAPVD1-205ENST00000394084 RETNLBQ9BQ08 111 aa8.13□□□□□ -1.11
GAPVD1-205ENST00000394084 DNAH6Q9C0G6 4158 aa8.12□□□□□ -1.11
GAPVD1-205ENST00000394084 KRTAP10-2P60368 255 aa8.12□□□□□ -1.11
GAPVD1-205ENST00000394084 DNAH11Q96DT5 4516 aa8.11□□□□□ -1.11
GAPVD1-205ENST00000394084 PMAIP1Q13794 54 aa8.11□□□□□ -1.11
GAPVD1-205ENST00000394084 LCA10Q71F78 164 aa8.11□□□□□ -1.11
GAPVD1-205ENST00000394084 ALMS1Q8TCU4 4167 aa8.11□□□□□ -1.11
GAPVD1-205ENST00000394084 KRTAP13-3Q3SY46 172 aa8.1□□□□□ -1.11
GAPVD1-205ENST00000394084 PRR26Q8N8Z3 221 aa8.1□□□□□ -1.11
GAPVD1-205ENST00000394084 LINC01558Q9Y6Z2 57 aa8.09□□□□□ -1.11
GAPVD1-205ENST00000394084 SSBP3-AS1Q7Z2R9 100 aa8.09□□□□□ -1.11
GAPVD1-205ENST00000394084 DNAH5Q8TE73 4624 aa8.08□□□□□ -1.12
GAPVD1-205ENST00000394084 LINC00313P59037 77 aa8.06□□□□□ -1.12
GAPVD1-205ENST00000394084 C8orf87E5RJ46 101 aa8.05□□□□□ -1.12
GAPVD1-205ENST00000394084 KRTAP13-2Q52LG2 175 aa8.05□□□□□ -1.12
GAPVD1-205ENST00000394084 SPINK7P58062 85 aa8.03□□□□□ -1.12
GAPVD1-205ENST00000394084 LRP1BQ9NZR2 4599 aa8.01□□□□□ -1.13
GAPVD1-205ENST00000394084 KRTAP10-1P60331 282 aa8□□□□□ -1.13
GAPVD1-205ENST00000394084 CDC42SE1Q9NRR8 79 aa8□□□□□ -1.13
GAPVD1-205ENST00000394084 ACYP2P14621 99 aa7.99□□□□□ -1.13
GAPVD1-205ENST00000394084 ATP11AUNQ6ZP68 121 aa7.99□□□□□ -1.13
GAPVD1-205ENST00000394084 FAM229AH3BQW9 127 aa7.98□□□□□ -1.13
GAPVD1-205ENST00000394084 SEC61GP60059 68 aa7.96□□□□□ -1.14
GAPVD1-205ENST00000394084 DMAC1Q96GE9 116 aa7.94□□□□□ -1.14
GAPVD1-205ENST00000394084 IGKV2-30P06310 120 aa7.94□□□□□ -1.14
GAPVD1-205ENST00000394084 HYDINQ4G0P3 5121 aa7.93□□□□□ -1.14
GAPVD1-205ENST00000394084 IGKV2D-30A0A075B6S6 120 aa7.92□□□□□ -1.14
GAPVD1-205ENST00000394084 KRTAP16-1A8MUX0 517 aa7.92□□□□□ -1.14
GAPVD1-205ENST00000394084 KRTAP1-4P0C5Y4 121 aa7.92□□□□□ -1.14
GAPVD1-205ENST00000394084 Q6ZSA8 131 aa7.92□□□□□ -1.14
GAPVD1-205ENST00000394084 A6NN06 94 aa7.91□□□□□ -1.14
GAPVD1-205ENST00000394084 KTN1-AS1Q86SY8 53 aa7.89□□□□□ -1.15
GAPVD1-205ENST00000394084 PKD1P98161 4303 aa7.89□□□□□ -1.15
GAPVD1-205ENST00000394084 PLA2G1BP04054 148 aaKnown RBP7.87□□□□□ -1.15
GAPVD1-205ENST00000394084 C4orf48Q5BLP8 95 aa7.87□□□□□ -1.15
GAPVD1-205ENST00000394084 VPS13BQ7Z7G8 4022 aa7.86□□□□□ -1.15
GAPVD1-205ENST00000394084 FAT2Q9NYQ8 4349 aa7.86□□□□□ -1.15
GAPVD1-205ENST00000394084 TYMSOSQ8TAI1 123 aa7.85□□□□□ -1.15
GAPVD1-205ENST00000394084 A0A1B0GU69 56 aa7.84□□□□□ -1.15
GAPVD1-205ENST00000394084 C7orf65Q6ZTY9 151 aa7.81□□□□□ -1.16
GAPVD1-205ENST00000394084 SPINK1P00995 79 aa7.77□□□□□ -1.17
GAPVD1-205ENST00000394084 RBM12B-AS1Q9P1G2 102 aa7.75□□□□□ -1.17
GAPVD1-205ENST00000394084 Q8N1X5 172 aa7.75□□□□□ -1.17
GAPVD1-205ENST00000394084 LINC00304Q8N9R0 145 aa7.73□□□□□ -1.17
GAPVD1-205ENST00000394084 SMR3BP02814 79 aaPredicted RBP7.72□□□□□ -1.17
GAPVD1-205ENST00000394084 PKHD1P08F94 4074 aa7.71□□□□□ -1.18
GAPVD1-205ENST00000394084 MIR22HGQ0VDD5 57 aa7.69□□□□□ -1.18
GAPVD1-205ENST00000394084 C9orf92A6NGG3 77 aa7.68□□□□□ -1.18
GAPVD1-205ENST00000394084 SPATA8Q6RVD6 105 aa7.68□□□□□ -1.18
GAPVD1-205ENST00000394084 UQCR11O14957 56 aa7.67□□□□□ -1.18
GAPVD1-205ENST00000394084 PRAC1Q96KF2 57 aa7.65□□□□□ -1.18
GAPVD1-205ENST00000394084 SACSQ9NZJ4 4579 aa7.65□□□□□ -1.19
GAPVD1-205ENST00000394084 ADM2Q7Z4H4 148 aa7.64□□□□□ -1.19
GAPVD1-205ENST00000394084 DYNC1H1Q14204 4646 aaKnown RBP7.63□□□□□ -1.19
GAPVD1-205ENST00000394084 FAT1Q14517 4588 aa7.62□□□□□ -1.19
GAPVD1-205ENST00000394084 RPS29P62273 56 aaKnown RBP7.58□□□□□ -1.2
GAPVD1-205ENST00000394084 KMT2CQ8NEZ4 4911 aaKnown RBP7.56□□□□□ -1.2
GAPVD1-205ENST00000394084 A8MUU9 505 aa7.53□□□□□ -1.2
GAPVD1-205ENST00000394084 C20orf166-AS1Q96NR2 134 aa7.52□□□□□ -1.21
GAPVD1-205ENST00000394084 RYR2Q92736 4967 aa7.52□□□□□ -1.21
GAPVD1-205ENST00000394084 KRTAP3-1Q9BYR8 98 aa7.51□□□□□ -1.21
GAPVD1-205ENST00000394084 APOBP04114 4563 aaKnown RBP7.49□□□□□ -1.21
GAPVD1-205ENST00000394084 KRTAP10-4P60372 401 aaPredicted RBP7.48□□□□□ -1.21
GAPVD1-205ENST00000394084 PKHD1L1Q86WI1 4243 aa7.47□□□□□ -1.21
GAPVD1-205ENST00000394084 RYR3Q15413 4870 aa7.46□□□□□ -1.22
GAPVD1-205ENST00000394084 A0A1B0GVY2 172 aa7.45□□□□□ -1.22
GAPVD1-205ENST00000394084 H0YAA0 97 aa7.43□□□□□ -1.22
GAPVD1-205ENST00000394084 FLG2Q5D862 2391 aaPredicted RBP7.4□□□□□ -1.22
GAPVD1-205ENST00000394084 A0A1B0GU33 70 aa7.39□□□□□ -1.23
GAPVD1-205ENST00000394084 CSAG1Q6PB30 78 aa7.38□□□□□ -1.23
GAPVD1-205ENST00000394084 H1FX-AS1Q4G0G2 97 aa7.35□□□□□ -1.23
GAPVD1-205ENST00000394084 COX6B2Q6YFQ2 88 aa7.34□□□□□ -1.23
GAPVD1-205ENST00000394084 LINC01554Q52M75 96 aa7.34□□□□□ -1.23
GAPVD1-205ENST00000394084 LRP1Q07954 4544 aaKnown RBP7.33□□□□□ -1.24
GAPVD1-205ENST00000394084 FAT3Q8TDW7 4589 aa7.3□□□□□ -1.24
GAPVD1-205ENST00000394084 DMBT1Q9UGM3 2413 aaPredicted RBP7.28□□□□□ -1.24
GAPVD1-205ENST00000394084 MYCBP2O75592 4640 aa7.23□□□□□ -1.25
GAPVD1-205ENST00000394084 HSPG2P98160 4391 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms