RNA–Protein interactions for RNA: ENST00000382751.3

URB1-201, Transcript of URB1 ribosome biogenesis 1 homolog (S. cerevisiae), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene URB1, Length 10,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
URB1-201ENST00000382751 DMXL2Q8TDJ6 3036 aa4.81□□□□□ -1.64
URB1-201ENST00000382751 COL12A1Q99715 3063 aa4.81□□□□□ -1.64
URB1-201ENST00000382751 DCHS2Q6V1P9 2916 aa4.8□□□□□ -1.64
URB1-201ENST00000382751 P0C880 135 aa4.8□□□□□ -1.64
URB1-201ENST00000382751 TNRC18O15417 2968 aaPredicted RBP4.8□□□□□ -1.64
URB1-201ENST00000382751 TNP1P09430 55 aa4.78□□□□□ -1.64
URB1-201ENST00000382751 WDFY4Q6ZS81 3184 aa4.78□□□□□ -1.64
URB1-201ENST00000382751 TENM2Q9NT68 2774 aa4.76□□□□□ -1.65
URB1-201ENST00000382751 MKI67P46013 3256 aaKnown RBP4.76□□□□□ -1.65
URB1-201ENST00000382751 XIRP2A4UGR9 3374 aa4.75□□□□□ -1.65
URB1-201ENST00000382751 H0YAA0 97 aa4.73□□□□□ -1.65
URB1-201ENST00000382751 RANBP2P49792 3224 aaKnown RBP4.73□□□□□ -1.65
URB1-201ENST00000382751 RPS29P62273 56 aaKnown RBP4.72□□□□□ -1.65
URB1-201ENST00000382751 ZZEF1O43149 2961 aa4.71□□□□□ -1.66
URB1-201ENST00000382751 CELSR3Q9NYQ7 3312 aa4.69□□□□□ -1.66
URB1-201ENST00000382751 FBN2P35556 2912 aa4.69□□□□□ -1.66
URB1-201ENST00000382751 MXRA5Q9NR99 2828 aa4.67□□□□□ -1.66
URB1-201ENST00000382751 REV3LO60673 3130 aa4.67□□□□□ -1.66
URB1-201ENST00000382751 TENM4Q6N022 2769 aa4.66□□□□□ -1.66
URB1-201ENST00000382751 PKD1L1Q8TDX9 2849 aa4.66□□□□□ -1.66
URB1-201ENST00000382751 OTOGQ6ZRI0 2925 aa4.65□□□□□ -1.66
URB1-201ENST00000382751 MEGF8Q7Z7M0 2845 aa4.65□□□□□ -1.67
URB1-201ENST00000382751 KRTAP10-8P60410 259 aa4.64□□□□□ -1.67
URB1-201ENST00000382751 LAMA1P25391 3075 aa4.64□□□□□ -1.67
URB1-201ENST00000382751 DMXL1Q9Y485 3027 aa4.64□□□□□ -1.67
URB1-201ENST00000382751 HTTP42858 3142 aa4.63□□□□□ -1.67
URB1-201ENST00000382751 KRTAP13-1Q8IUC0 172 aa4.63□□□□□ -1.67
URB1-201ENST00000382751 LAMA3Q16787 3333 aa4.62□□□□□ -1.67
URB1-201ENST00000382751 UNC80Q8N2C7 3258 aa4.61□□□□□ -1.67
URB1-201ENST00000382751 KRTAP13-2Q52LG2 175 aa4.61□□□□□ -1.67
URB1-201ENST00000382751 KRTAP7-1Q8IUC3 87 aa4.61□□□□□ -1.67
URB1-201ENST00000382751 ADGRG4Q8IZF6 3080 aa4.6□□□□□ -1.67
URB1-201ENST00000382751 BRCA2P51587 3418 aa4.59□□□□□ -1.67
URB1-201ENST00000382751 Q6ZRN7 208 aaPredicted RBP4.59□□□□□ -1.68
URB1-201ENST00000382751 HRNRQ86YZ3 2850 aaPredicted RBP4.57□□□□□ -1.68
URB1-201ENST00000382751 COL7A1Q02388 2944 aa4.57□□□□□ -1.68
URB1-201ENST00000382751 BOD1L1Q8NFC6 3051 aa4.56□□□□□ -1.68
URB1-201ENST00000382751 ZFHX3Q15911 3703 aa4.55□□□□□ -1.68
URB1-201ENST00000382751 COL6A3P12111 3177 aa4.54□□□□□ -1.68
URB1-201ENST00000382751 PRO2289Q9P1D8 64 aa4.54□□□□□ -1.68
URB1-201ENST00000382751 CELSR1Q9NYQ6 3014 aa4.53□□□□□ -1.68
URB1-201ENST00000382751 DNAH14Q0VDD8 3507 aa4.52□□□□□ -1.69
URB1-201ENST00000382751 ATMQ13315 3056 aa4.51□□□□□ -1.69
URB1-201ENST00000382751 A0A1B0GVY2 172 aa4.49□□□□□ -1.69
URB1-201ENST00000382751 CFAP47Q6ZTR5 3102 aa4.47□□□□□ -1.69
URB1-201ENST00000382751 KRTAP10-10P60014 251 aa4.45□□□□□ -1.7
URB1-201ENST00000382751 CDH23Q9H251 3354 aa4.44□□□□□ -1.7
URB1-201ENST00000382751 VCANP13611 3396 aa4.44□□□□□ -1.7
URB1-201ENST00000382751 USP34Q70CQ2 3546 aa4.41□□□□□ -1.7
URB1-201ENST00000382751 XP32Q5T750 250 aa4.4□□□□□ -1.71
URB1-201ENST00000382751 SPEGQ15772 3267 aa4.4□□□□□ -1.71
URB1-201ENST00000382751 TPRXLQ17RH7 258 aa4.39□□□□□ -1.71
URB1-201ENST00000382751 KRTAP12-2P59991 146 aa4.34□□□□□ -1.72
URB1-201ENST00000382751 KRTAP13-3Q3SY46 172 aa4.32□□□□□ -1.72
URB1-201ENST00000382751 SZT2Q5T011 3432 aa4.32□□□□□ -1.72
URB1-201ENST00000382751 INE1O15225 51 aa4.31□□□□□ -1.72
URB1-201ENST00000382751 KRTAP13-4Q3LI77 160 aa4.31□□□□□ -1.72
URB1-201ENST00000382751 KRTAP1-4P0C5Y4 121 aa4.28□□□□□ -1.72
URB1-201ENST00000382751 KRTAP21-3Q3LHN1 58 aa4.28□□□□□ -1.72
URB1-201ENST00000382751 MYO15AQ9UKN7 3530 aa4.27□□□□□ -1.73
URB1-201ENST00000382751 FBN1P35555 2871 aaKnown RBP4.26□□□□□ -1.73
URB1-201ENST00000382751 FBN3Q75N90 2809 aa4.25□□□□□ -1.73
URB1-201ENST00000382751 KRTAP15-1Q3LI76 137 aa4.25□□□□□ -1.73
URB1-201ENST00000382751 EYSQ5T1H1 3165 aa4.23□□□□□ -1.73
URB1-201ENST00000382751 KRTAP12-1P59990 96 aa4.23□□□□□ -1.73
URB1-201ENST00000382751 SPTBN5Q9NRC6 3674 aaKnown RBP4.21□□□□□ -1.74
URB1-201ENST00000382751 WDFY3Q8IZQ1 3526 aa4.15□□□□□ -1.74
URB1-201ENST00000382751 ZFHX4Q86UP3 3567 aa4.14□□□□□ -1.75
URB1-201ENST00000382751 ASPMQ8IZT6 3477 aa4.09□□□□□ -1.76
URB1-201ENST00000382751 NBPF19A0A087WUL8 3843 aa4.09□□□□□ -1.76
URB1-201ENST00000382751 LOC400499M0QZD8 3231 aa4.07□□□□□ -1.76
URB1-201ENST00000382751 KRTAP10-6P60371 365 aaPredicted RBP4.02□□□□□ -1.77
URB1-201ENST00000382751 SMG1Q96Q15 3661 aaKnown RBP4.02□□□□□ -1.77
URB1-201ENST00000382751 KRTAP3-1Q9BYR8 98 aa4□□□□□ -1.77
URB1-201ENST00000382751 LAMA5O15230 3695 aa4□□□□□ -1.77
URB1-201ENST00000382751 DMDP11532 3685 aa3.98□□□□□ -1.77
URB1-201ENST00000382751 KRTAP23-1A1A580 65 aa3.97□□□□□ -1.77
URB1-201ENST00000382751 RELNP78509 3460 aa3.97□□□□□ -1.77
URB1-201ENST00000382751 CSMD1Q96PZ7 3565 aa3.96□□□□□ -1.78
URB1-201ENST00000382751 DCHS1Q96JQ0 3298 aa3.94□□□□□ -1.78
URB1-201ENST00000382751 CRCT1Q9UGL9 99 aa3.94□□□□□ -1.78
URB1-201ENST00000382751 SPENQ96T58 3664 aaKnown RBP3.91□□□□□ -1.78
URB1-201ENST00000382751 KRTAP3-2Q9BYR7 98 aa3.85□□□□□ -1.79
URB1-201ENST00000382751 KRTAP10-12P60413 245 aa3.82□□□□□ -1.8
URB1-201ENST00000382751 CUBNO60494 3623 aa3.81□□□□□ -1.8
URB1-201ENST00000382751 TRRAPQ9Y4A5 3859 aa3.78□□□□□ -1.8
URB1-201ENST00000382751 VPS13CQ709C8 3753 aa3.78□□□□□ -1.81
URB1-201ENST00000382751 AKAP9Q99996 3911 aa3.75□□□□□ -1.81
URB1-201ENST00000382751 KRTAP12-3P60328 96 aa3.74□□□□□ -1.81
URB1-201ENST00000382751 KRTAP3-3Q9BYR6 98 aa3.74□□□□□ -1.81
URB1-201ENST00000382751 SVEP1Q4LDE5 3571 aa3.72□□□□□ -1.81
URB1-201ENST00000382751 CSMD3Q7Z407 3707 aa3.67□□□□□ -1.82
URB1-201ENST00000382751 MUC3AQ02505 3323 aa3.66□□□□□ -1.82
URB1-201ENST00000382751 KRTAP10-5P60370 271 aa3.63□□□□□ -1.83
URB1-201ENST00000382751 BSNQ9UPA5 3926 aa3.62□□□□□ -1.83
URB1-201ENST00000382751 LCE3AQ5TA76 89 aa3.62□□□□□ -1.83
URB1-201ENST00000382751 ALMS1Q8TCU4 4167 aa3.61□□□□□ -1.83
URB1-201ENST00000382751 MT1HL1P0DM35 61 aa3.57□□□□□ -1.84
URB1-201ENST00000382751 LYSTQ99698 3801 aa3.56□□□□□ -1.84
URB1-201ENST00000382751 KRTAP8-1Q8IUC2 63 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms