RNA–Protein interactions for RNA: ENST00000377115.4

FOXA2-201, Transcript of forkhead box A2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXA2, Length 2,401 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2-201ENST00000377115 SPACA4Q8TDM5 124 aa13.74□□□□□ -0.21
FOXA2-201ENST00000377115 MGAM2Q2M2H8 2515 aa13.74□□□□□ -0.21
FOXA2-201ENST00000377115 DNAH8Q96JB1 4490 aa13.72□□□□□ -0.21
FOXA2-201ENST00000377115 Q6ZRN7 208 aaPredicted RBP13.71□□□□□ -0.22
FOXA2-201ENST00000377115 NBDYA0A0U1RRE5 68 aa13.7□□□□□ -0.22
FOXA2-201ENST00000377115 RBM12B-AS1Q9P1G2 102 aa13.7□□□□□ -0.22
FOXA2-201ENST00000377115 Q5W150 140 aa13.66□□□□□ -0.22
FOXA2-201ENST00000377115 PRR26Q8N8Z3 221 aa13.66□□□□□ -0.22
FOXA2-201ENST00000377115 ZNF706Q9Y5V0 76 aaPredicted RBP13.65□□□□□ -0.22
FOXA2-201ENST00000377115 PSORS1C2Q9UIG4 136 aa13.64□□□□□ -0.23
FOXA2-201ENST00000377115 SPINK6Q6UWN8 80 aa13.63□□□□□ -0.23
FOXA2-201ENST00000377115 MDFIQ99750 246 aa13.61□□□□□ -0.23
FOXA2-201ENST00000377115 HECTD4Q9Y4D8 3996 aa13.6□□□□□ -0.23
FOXA2-201ENST00000377115 IGLV5-52A0A0A0MRZ9 124 aa13.59□□□□□ -0.23
FOXA2-201ENST00000377115 KRTAP13-3Q3SY46 172 aa13.59□□□□□ -0.23
FOXA2-201ENST00000377115 C7orf65Q6ZTY9 151 aa13.57□□□□□ -0.24
FOXA2-201ENST00000377115 ALMS1Q8TCU4 4167 aa13.55□□□□□ -0.24
FOXA2-201ENST00000377115 ZNF861PO60384 105 aa13.54□□□□□ -0.24
FOXA2-201ENST00000377115 A0A087WTM6 91 aa13.5□□□□□ -0.25
FOXA2-201ENST00000377115 DNAH17Q9UFH2 4485 aa13.48□□□□□ -0.25
FOXA2-201ENST00000377115 RTL8CO15255 209 aa13.48□□□□□ -0.25
FOXA2-201ENST00000377115 ACYP2P14621 99 aa13.48□□□□□ -0.25
FOXA2-201ENST00000377115 VPS13DQ5THJ4 4388 aa13.47□□□□□ -0.25
FOXA2-201ENST00000377115 CIRBP-AS1Q8TBR5 109 aa13.47□□□□□ -0.25
FOXA2-201ENST00000377115 STARD9Q9P2P6 4700 aa13.46□□□□□ -0.25
FOXA2-201ENST00000377115 DNAH2Q9P225 4427 aa13.41□□□□□ -0.26
FOXA2-201ENST00000377115 DMAC1Q96GE9 116 aa13.4□□□□□ -0.26
FOXA2-201ENST00000377115 NUPR2A6NF83 97 aa13.39□□□□□ -0.27
FOXA2-201ENST00000377115 RETNLBQ9BQ08 111 aa13.39□□□□□ -0.27
FOXA2-201ENST00000377115 KMT2AQ03164 3969 aa13.38□□□□□ -0.27
FOXA2-201ENST00000377115 C8orf87E5RJ46 101 aa13.34□□□□□ -0.27
FOXA2-201ENST00000377115 IGLV7-43P04211 117 aa13.33□□□□□ -0.28
FOXA2-201ENST00000377115 LINC00313P59037 77 aa13.32□□□□□ -0.28
FOXA2-201ENST00000377115 FBN3Q75N90 2809 aa13.31□□□□□ -0.28
FOXA2-201ENST00000377115 PRKDCP78527 4128 aaKnown RBP13.3□□□□□ -0.28
FOXA2-201ENST00000377115 A0A1B0GU69 56 aa13.29□□□□□ -0.28
FOXA2-201ENST00000377115 PRAC1Q96KF2 57 aa13.29□□□□□ -0.28
FOXA2-201ENST00000377115 FAM229AH3BQW9 127 aa13.27□□□□□ -0.29
FOXA2-201ENST00000377115 IGKV2-30P06310 120 aa13.24□□□□□ -0.29
FOXA2-201ENST00000377115 ADM2Q7Z4H4 148 aa13.24□□□□□ -0.29
FOXA2-201ENST00000377115 SSBP3-AS1Q7Z2R9 100 aa13.22□□□□□ -0.29
FOXA2-201ENST00000377115 MEGF8Q7Z7M0 2845 aa13.21□□□□□ -0.29
FOXA2-201ENST00000377115 DNAH11Q96DT5 4516 aa13.21□□□□□ -0.3
FOXA2-201ENST00000377115 DNAH6Q9C0G6 4158 aa13.19□□□□□ -0.3
FOXA2-201ENST00000377115 SPATA8Q6RVD6 105 aa13.18□□□□□ -0.3
FOXA2-201ENST00000377115 TGP01266 2768 aa13.17□□□□□ -0.3
FOXA2-201ENST00000377115 PLA2G1BP04054 148 aaKnown RBP13.13□□□□□ -0.31
FOXA2-201ENST00000377115 KRTAP16-1A8MUX0 517 aa13.12□□□□□ -0.31
FOXA2-201ENST00000377115 MIR22HGQ0VDD5 57 aa13.11□□□□□ -0.31
FOXA2-201ENST00000377115 KRTAP13-2Q52LG2 175 aa13.1□□□□□ -0.31
FOXA2-201ENST00000377115 IGKV2D-30A0A075B6S6 120 aa13.1□□□□□ -0.31
FOXA2-201ENST00000377115 UQCR11O14957 56 aa13.08□□□□□ -0.32
FOXA2-201ENST00000377115 DNAH5Q8TE73 4624 aa13.07□□□□□ -0.32
FOXA2-201ENST00000377115 C1orf134Q5TEV5 83 aa13.04□□□□□ -0.32
FOXA2-201ENST00000377115 LRP1BQ9NZR2 4599 aa12.96□□□□□ -0.33
FOXA2-201ENST00000377115 KRTAP10-2P60368 255 aa12.94□□□□□ -0.34
FOXA2-201ENST00000377115 LINC01554Q52M75 96 aa12.91□□□□□ -0.34
FOXA2-201ENST00000377115 SPINK1P00995 79 aa12.89□□□□□ -0.35
FOXA2-201ENST00000377115 LY6G6CO95867 125 aa12.85□□□□□ -0.35
FOXA2-201ENST00000377115 KRTAP1-4P0C5Y4 121 aa12.85□□□□□ -0.35
FOXA2-201ENST00000377115 Q8N1X5 172 aa12.84□□□□□ -0.35
FOXA2-201ENST00000377115 VPS13BQ7Z7G8 4022 aa12.81□□□□□ -0.36
FOXA2-201ENST00000377115 CSAG1Q6PB30 78 aa12.81□□□□□ -0.36
FOXA2-201ENST00000377115 KRTAP10-1P60331 282 aa12.77□□□□□ -0.37
FOXA2-201ENST00000377115 PKD1P98161 4303 aa12.75□□□□□ -0.37
FOXA2-201ENST00000377115 C4orf48Q5BLP8 95 aa12.73□□□□□ -0.37
FOXA2-201ENST00000377115 Q6ZSA8 131 aa12.73□□□□□ -0.37
FOXA2-201ENST00000377115 TYMSOSQ8TAI1 123 aa12.69□□□□□ -0.38
FOXA2-201ENST00000377115 FAT2Q9NYQ8 4349 aa12.65□□□□□ -0.38
FOXA2-201ENST00000377115 H0YAA0 97 aa12.63□□□□□ -0.39
FOXA2-201ENST00000377115 HYDINQ4G0P3 5121 aa12.62□□□□□ -0.39
FOXA2-201ENST00000377115 A8MUU9 505 aa12.54□□□□□ -0.4
FOXA2-201ENST00000377115 LINC00304Q8N9R0 145 aa12.49□□□□□ -0.41
FOXA2-201ENST00000377115 KRTAP3-1Q9BYR8 98 aa12.48□□□□□ -0.41
FOXA2-201ENST00000377115 C9orf92A6NGG3 77 aa12.46□□□□□ -0.41
FOXA2-201ENST00000377115 A0A1B0GU33 70 aa12.45□□□□□ -0.42
FOXA2-201ENST00000377115 DNHD1Q96M86 4753 aa12.44□□□□□ -0.42
FOXA2-201ENST00000377115 H1FX-AS1Q4G0G2 97 aa12.39□□□□□ -0.43
FOXA2-201ENST00000377115 PKHD1P08F94 4074 aa12.38□□□□□ -0.43
FOXA2-201ENST00000377115 RPS29P62273 56 aaKnown RBP12.38□□□□□ -0.43
FOXA2-201ENST00000377115 SACSQ9NZJ4 4579 aa12.37□□□□□ -0.43
FOXA2-201ENST00000377115 KRTAP25-1Q3LHN0 102 aa12.37□□□□□ -0.43
FOXA2-201ENST00000377115 C20orf166-AS1Q96NR2 134 aa12.36□□□□□ -0.43
FOXA2-201ENST00000377115 H3BS24 57 aa12.33□□□□□ -0.44
FOXA2-201ENST00000377115 FLG2Q5D862 2391 aaPredicted RBP12.26□□□□□ -0.45
FOXA2-201ENST00000377115 PKHD1L1Q86WI1 4243 aa12.24□□□□□ -0.45
FOXA2-201ENST00000377115 CRIPTQ9P021 101 aa12.21□□□□□ -0.46
FOXA2-201ENST00000377115 SMR3BP02814 79 aaPredicted RBP12.2□□□□□ -0.46
FOXA2-201ENST00000377115 COX6B2Q6YFQ2 88 aa12.19□□□□□ -0.46
FOXA2-201ENST00000377115 FAT1Q14517 4588 aa12.16□□□□□ -0.46
FOXA2-201ENST00000377115 ROMO1P60602 79 aa12.13□□□□□ -0.47
FOXA2-201ENST00000377115 DYNC1H1Q14204 4646 aaKnown RBP12.12□□□□□ -0.47
FOXA2-201ENST00000377115 APOBP04114 4563 aaKnown RBP12.11□□□□□ -0.47
FOXA2-201ENST00000377115 K7ERS5 55 aa12.1□□□□□ -0.47
FOXA2-201ENST00000377115 KRTAP10-4P60372 401 aaPredicted RBP11.96□□□□□ -0.49
FOXA2-201ENST00000377115 KRTAP10-6P60371 365 aaPredicted RBP11.95□□□□□ -0.5
FOXA2-201ENST00000377115 KRTAP13-4Q3LI77 160 aa11.94□□□□□ -0.5
FOXA2-201ENST00000377115 KRTAP3-3Q9BYR6 98 aa11.91□□□□□ -0.5
FOXA2-201ENST00000377115 RPL37P61927 97 aaKnown RBP11.9□□□□□ -0.5
FOXA2-201ENST00000377115 A0A0D9SG42 100 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 751.9 ms