RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 PRR26Q8N8Z3 221 aa9.83□□□□□ -0.84
TRIM39-201ENST00000376656 SPACA4Q8TDM5 124 aa9.81□□□□□ -0.84
TRIM39-201ENST00000376656 Q5W150 140 aa9.81□□□□□ -0.84
TRIM39-201ENST00000376656 C7orf65Q6ZTY9 151 aa9.8□□□□□ -0.84
TRIM39-201ENST00000376656 DNAH8Q96JB1 4490 aa9.78□□□□□ -0.84
TRIM39-201ENST00000376656 Q6ZRN7 208 aaPredicted RBP9.78□□□□□ -0.84
TRIM39-201ENST00000376656 FRAS1Q86XX4 4008 aa9.78□□□□□ -0.84
TRIM39-201ENST00000376656 NBDYA0A0U1RRE5 68 aa9.77□□□□□ -0.85
TRIM39-201ENST00000376656 DYNC2H1Q8NCM8 4307 aaKnown RBP9.77□□□□□ -0.85
TRIM39-201ENST00000376656 PLECQ15149 4684 aaKnown RBP9.77□□□□□ -0.85
TRIM39-201ENST00000376656 SPINK6Q6UWN8 80 aa9.77□□□□□ -0.85
TRIM39-201ENST00000376656 MDFIQ99750 246 aa9.77□□□□□ -0.85
TRIM39-201ENST00000376656 MGAM2Q2M2H8 2515 aa9.76□□□□□ -0.85
TRIM39-201ENST00000376656 ZNF706Q9Y5V0 76 aaPredicted RBP9.76□□□□□ -0.85
TRIM39-201ENST00000376656 KRTAP13-3Q3SY46 172 aa9.75□□□□□ -0.85
TRIM39-201ENST00000376656 PSORS1C2Q9UIG4 136 aa9.75□□□□□ -0.85
TRIM39-201ENST00000376656 ALMS1Q8TCU4 4167 aa9.73□□□□□ -0.85
TRIM39-201ENST00000376656 C8orf87E5RJ46 101 aa9.71□□□□□ -0.85
TRIM39-201ENST00000376656 IGLV5-52A0A0A0MRZ9 124 aa9.71□□□□□ -0.86
TRIM39-201ENST00000376656 ZNF861PO60384 105 aa9.68□□□□□ -0.86
TRIM39-201ENST00000376656 ACYP2P14621 99 aa9.68□□□□□ -0.86
TRIM39-201ENST00000376656 HECTD4Q9Y4D8 3996 aa9.66□□□□□ -0.86
TRIM39-201ENST00000376656 A0A087WTM6 91 aa9.63□□□□□ -0.87
TRIM39-201ENST00000376656 CIRBP-AS1Q8TBR5 109 aa9.63□□□□□ -0.87
TRIM39-201ENST00000376656 DMAC1Q96GE9 116 aa9.62□□□□□ -0.87
TRIM39-201ENST00000376656 LINC00313P59037 77 aa9.61□□□□□ -0.87
TRIM39-201ENST00000376656 RTL8CO15255 209 aa9.61□□□□□ -0.87
TRIM39-201ENST00000376656 RETNLBQ9BQ08 111 aa9.61□□□□□ -0.87
TRIM39-201ENST00000376656 PRAC1Q96KF2 57 aa9.6□□□□□ -0.87
TRIM39-201ENST00000376656 DNAH17Q9UFH2 4485 aa9.59□□□□□ -0.87
TRIM39-201ENST00000376656 VPS13DQ5THJ4 4388 aa9.58□□□□□ -0.88
TRIM39-201ENST00000376656 ADM2Q7Z4H4 148 aa9.56□□□□□ -0.88
TRIM39-201ENST00000376656 A0A1B0GU69 56 aa9.56□□□□□ -0.88
TRIM39-201ENST00000376656 STARD9Q9P2P6 4700 aa9.54□□□□□ -0.88
TRIM39-201ENST00000376656 NUPR2A6NF83 97 aa9.53□□□□□ -0.88
TRIM39-201ENST00000376656 IGLV7-43P04211 117 aa9.53□□□□□ -0.88
TRIM39-201ENST00000376656 DNAH2Q9P225 4427 aa9.52□□□□□ -0.89
TRIM39-201ENST00000376656 FAM229AH3BQW9 127 aa9.51□□□□□ -0.89
TRIM39-201ENST00000376656 IGKV2-30P06310 120 aa9.5□□□□□ -0.89
TRIM39-201ENST00000376656 SPATA8Q6RVD6 105 aa9.49□□□□□ -0.89
TRIM39-201ENST00000376656 KMT2AQ03164 3969 aa9.48□□□□□ -0.89
TRIM39-201ENST00000376656 PLA2G1BP04054 148 aaKnown RBP9.48□□□□□ -0.89
TRIM39-201ENST00000376656 FBN3Q75N90 2809 aa9.47□□□□□ -0.89
TRIM39-201ENST00000376656 SSBP3-AS1Q7Z2R9 100 aa9.46□□□□□ -0.89
TRIM39-201ENST00000376656 MIR22HGQ0VDD5 57 aa9.44□□□□□ -0.9
TRIM39-201ENST00000376656 PRKDCP78527 4128 aaKnown RBP9.42□□□□□ -0.9
TRIM39-201ENST00000376656 UQCR11O14957 56 aa9.41□□□□□ -0.9
TRIM39-201ENST00000376656 MEGF8Q7Z7M0 2845 aa9.41□□□□□ -0.9
TRIM39-201ENST00000376656 KRTAP16-1A8MUX0 517 aa9.4□□□□□ -0.9
TRIM39-201ENST00000376656 IGKV2D-30A0A075B6S6 120 aa9.39□□□□□ -0.91
TRIM39-201ENST00000376656 TGP01266 2768 aa9.38□□□□□ -0.91
TRIM39-201ENST00000376656 DNAH11Q96DT5 4516 aa9.38□□□□□ -0.91
TRIM39-201ENST00000376656 KRTAP13-2Q52LG2 175 aa9.37□□□□□ -0.91
TRIM39-201ENST00000376656 DNAH6Q9C0G6 4158 aa9.36□□□□□ -0.91
TRIM39-201ENST00000376656 LINC01554Q52M75 96 aa9.33□□□□□ -0.92
TRIM39-201ENST00000376656 C1orf134Q5TEV5 83 aa9.29□□□□□ -0.92
TRIM39-201ENST00000376656 DNAH5Q8TE73 4624 aa9.28□□□□□ -0.92
TRIM39-201ENST00000376656 SPINK1P00995 79 aa9.26□□□□□ -0.93
TRIM39-201ENST00000376656 CSAG1Q6PB30 78 aa9.25□□□□□ -0.93
TRIM39-201ENST00000376656 KRTAP10-2P60368 255 aa9.23□□□□□ -0.93
TRIM39-201ENST00000376656 LRP1BQ9NZR2 4599 aa9.22□□□□□ -0.93
TRIM39-201ENST00000376656 Q8N1X5 172 aa9.21□□□□□ -0.93
TRIM39-201ENST00000376656 KRTAP1-4P0C5Y4 121 aa9.18□□□□□ -0.94
TRIM39-201ENST00000376656 LY6G6CO95867 125 aa9.14□□□□□ -0.95
TRIM39-201ENST00000376656 KRTAP10-1P60331 282 aa9.1□□□□□ -0.95
TRIM39-201ENST00000376656 VPS13BQ7Z7G8 4022 aa9.09□□□□□ -0.95
TRIM39-201ENST00000376656 Q6ZSA8 131 aa9.09□□□□□ -0.95
TRIM39-201ENST00000376656 H0YAA0 97 aa9.08□□□□□ -0.96
TRIM39-201ENST00000376656 TYMSOSQ8TAI1 123 aa9.06□□□□□ -0.96
TRIM39-201ENST00000376656 PKD1P98161 4303 aa9.06□□□□□ -0.96
TRIM39-201ENST00000376656 A8MUU9 505 aa9.03□□□□□ -0.96
TRIM39-201ENST00000376656 LINC00304Q8N9R0 145 aa8.98□□□□□ -0.97
TRIM39-201ENST00000376656 FAT2Q9NYQ8 4349 aa8.97□□□□□ -0.97
TRIM39-201ENST00000376656 A0A0A0MQY5 61 aa8.95□□□□□ -0.98
TRIM39-201ENST00000376656 A0A1B0GU33 70 aa8.95□□□□□ -0.98
TRIM39-201ENST00000376656 KRTAP3-1Q9BYR8 98 aa8.95□□□□□ -0.98
TRIM39-201ENST00000376656 HYDINQ4G0P3 5121 aa8.93□□□□□ -0.98
TRIM39-201ENST00000376656 KRTAP25-1Q3LHN0 102 aa8.92□□□□□ -0.98
TRIM39-201ENST00000376656 C9orf92A6NGG3 77 aa8.91□□□□□ -0.98
TRIM39-201ENST00000376656 H1FX-AS1Q4G0G2 97 aa8.91□□□□□ -0.98
TRIM39-201ENST00000376656 FLG2Q5D862 2391 aaPredicted RBP8.84□□□□□ -0.99
TRIM39-201ENST00000376656 C20orf166-AS1Q96NR2 134 aa8.84□□□□□ -0.99
TRIM39-201ENST00000376656 RPS29P62273 56 aaKnown RBP8.83□□□□□ -1
TRIM39-201ENST00000376656 SACSQ9NZJ4 4579 aa8.82□□□□□ -1
TRIM39-201ENST00000376656 CRIPTQ9P021 101 aa8.8□□□□□ -1
TRIM39-201ENST00000376656 ROMO1P60602 79 aa8.77□□□□□ -1.01
TRIM39-201ENST00000376656 PKHD1P08F94 4074 aa8.76□□□□□ -1.01
TRIM39-201ENST00000376656 COX6B2Q6YFQ2 88 aa8.75□□□□□ -1.01
TRIM39-201ENST00000376656 DNHD1Q96M86 4753 aa8.75□□□□□ -1.01
TRIM39-201ENST00000376656 PKHD1L1Q86WI1 4243 aa8.71□□□□□ -1.02
TRIM39-201ENST00000376656 K7ERS5 55 aa8.7□□□□□ -1.02
TRIM39-201ENST00000376656 SMR3BP02814 79 aaPredicted RBP8.7□□□□□ -1.02
TRIM39-201ENST00000376656 FAT1Q14517 4588 aa8.64□□□□□ -1.03
TRIM39-201ENST00000376656 DYNC1H1Q14204 4646 aaKnown RBP8.6□□□□□ -1.03
TRIM39-201ENST00000376656 APOBP04114 4563 aaKnown RBP8.6□□□□□ -1.03
TRIM39-201ENST00000376656 KRTAP10-6P60371 365 aaPredicted RBP8.57□□□□□ -1.04
TRIM39-201ENST00000376656 KRTAP13-4Q3LI77 160 aa8.57□□□□□ -1.04
TRIM39-201ENST00000376656 P0C880 135 aa8.55□□□□□ -1.04
TRIM39-201ENST00000376656 RPL37P61927 97 aaKnown RBP8.55□□□□□ -1.04
TRIM39-201ENST00000376656 A0A0D9SG42 100 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms