RNA–Protein interactions for RNA: ENST00000374736.7

ABCA1-202, Transcript of ATP binding cassette subfamily A member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA1, Length 10,494 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-202ENST00000374736 KRTAP10-11P60412 298 aa4.51□□□□□ -1.69
ABCA1-202ENST00000374736 XP32Q5T750 250 aa4.48□□□□□ -1.69
ABCA1-202ENST00000374736 KRTAP13-2Q52LG2 175 aa4.46□□□□□ -1.7
ABCA1-202ENST00000374736 MXRA5Q9NR99 2828 aa4.42□□□□□ -1.7
ABCA1-202ENST00000374736 PKD1L1Q8TDX9 2849 aa4.41□□□□□ -1.7
ABCA1-202ENST00000374736 KRTAP10-3P60369 221 aa4.41□□□□□ -1.7
ABCA1-202ENST00000374736 PRUNE2Q8WUY3 3088 aa4.4□□□□□ -1.7
ABCA1-202ENST00000374736 TENM2Q9NT68 2774 aa4.4□□□□□ -1.71
ABCA1-202ENST00000374736 LAMA2P24043 3122 aaKnown RBP4.39□□□□□ -1.71
ABCA1-202ENST00000374736 CEP350Q5VT06 3117 aa4.38□□□□□ -1.71
ABCA1-202ENST00000374736 KRTAP7-1Q8IUC3 87 aa4.37□□□□□ -1.71
ABCA1-202ENST00000374736 DMXL2Q8TDJ6 3036 aa4.37□□□□□ -1.71
ABCA1-202ENST00000374736 TRIOO75962 3097 aa4.37□□□□□ -1.71
ABCA1-202ENST00000374736 KRTAP12-1P59990 96 aa4.36□□□□□ -1.71
ABCA1-202ENST00000374736 KRTAP1-3Q8IUG1 177 aa4.34□□□□□ -1.71
ABCA1-202ENST00000374736 KRTAP1-1Q07627 177 aa4.34□□□□□ -1.72
ABCA1-202ENST00000374736 COL12A1Q99715 3063 aa4.33□□□□□ -1.72
ABCA1-202ENST00000374736 OTOGQ6ZRI0 2925 aa4.33□□□□□ -1.72
ABCA1-202ENST00000374736 ZZEF1O43149 2961 aa4.3□□□□□ -1.72
ABCA1-202ENST00000374736 M0R2T5 61 aa4.3□□□□□ -1.72
ABCA1-202ENST00000374736 TENM4Q6N022 2769 aa4.29□□□□□ -1.72
ABCA1-202ENST00000374736 HRNRQ86YZ3 2850 aaPredicted RBP4.28□□□□□ -1.72
ABCA1-202ENST00000374736 KRTAP1-5Q9BYS1 174 aa4.28□□□□□ -1.72
ABCA1-202ENST00000374736 SMR3BP02814 79 aaPredicted RBP4.27□□□□□ -1.73
ABCA1-202ENST00000374736 MEGF8Q7Z7M0 2845 aa4.27□□□□□ -1.73
ABCA1-202ENST00000374736 CELSR1Q9NYQ6 3014 aa4.21□□□□□ -1.74
ABCA1-202ENST00000374736 LAMA1P25391 3075 aa4.21□□□□□ -1.74
ABCA1-202ENST00000374736 VPS13AQ96RL7 3174 aa4.21□□□□□ -1.74
ABCA1-202ENST00000374736 KRTAP21-3Q3LHN1 58 aa4.21□□□□□ -1.74
ABCA1-202ENST00000374736 DMXL1Q9Y485 3027 aa4.21□□□□□ -1.74
ABCA1-202ENST00000374736 UTRNP46939 3433 aa4.17□□□□□ -1.74
ABCA1-202ENST00000374736 FREM2Q5SZK8 3169 aa4.16□□□□□ -1.74
ABCA1-202ENST00000374736 ALMS1Q8TCU4 4167 aa4.16□□□□□ -1.74
ABCA1-202ENST00000374736 COL7A1Q02388 2944 aa4.15□□□□□ -1.75
ABCA1-202ENST00000374736 VWFP04275 2813 aa4.15□□□□□ -1.75
ABCA1-202ENST00000374736 KRTAP19-4Q3LI73 84 aa4.14□□□□□ -1.75
ABCA1-202ENST00000374736 HTTP42858 3142 aa4.14□□□□□ -1.75
ABCA1-202ENST00000374736 KRTAP10-6P60371 365 aaPredicted RBP4.14□□□□□ -1.75
ABCA1-202ENST00000374736 FBN2P35556 2912 aa4.13□□□□□ -1.75
ABCA1-202ENST00000374736 ATMQ13315 3056 aa4.12□□□□□ -1.75
ABCA1-202ENST00000374736 MT3P25713 68 aa4.08□□□□□ -1.76
ABCA1-202ENST00000374736 KRTAP10-1P60331 282 aa4.08□□□□□ -1.76
ABCA1-202ENST00000374736 GOLGB1Q14789 3259 aaKnown RBP4.08□□□□□ -1.76
ABCA1-202ENST00000374736 RANBP2P49792 3224 aaKnown RBP4.06□□□□□ -1.76
ABCA1-202ENST00000374736 KRTAP10-2P60368 255 aa4.03□□□□□ -1.76
ABCA1-202ENST00000374736 ADGRG4Q8IZF6 3080 aa4.02□□□□□ -1.77
ABCA1-202ENST00000374736 KRTAP1-4P0C5Y4 121 aa4□□□□□ -1.77
ABCA1-202ENST00000374736 XIRP2A4UGR9 3374 aa4□□□□□ -1.77
ABCA1-202ENST00000374736 KRTAP3-1Q9BYR8 98 aa3.97□□□□□ -1.77
ABCA1-202ENST00000374736 REV3LO60673 3130 aa3.95□□□□□ -1.78
ABCA1-202ENST00000374736 WDFY4Q6ZS81 3184 aa3.95□□□□□ -1.78
ABCA1-202ENST00000374736 BOD1L1Q8NFC6 3051 aa3.91□□□□□ -1.78
ABCA1-202ENST00000374736 KRTAP3-2Q9BYR7 98 aa3.9□□□□□ -1.79
ABCA1-202ENST00000374736 FBN1P35555 2871 aaKnown RBP3.86□□□□□ -1.79
ABCA1-202ENST00000374736 UNC80Q8N2C7 3258 aa3.86□□□□□ -1.79
ABCA1-202ENST00000374736 FBN3Q75N90 2809 aa3.84□□□□□ -1.79
ABCA1-202ENST00000374736 NBPF19A0A087WUL8 3843 aa3.82□□□□□ -1.8
ABCA1-202ENST00000374736 CFAP47Q6ZTR5 3102 aa3.8□□□□□ -1.8
ABCA1-202ENST00000374736 SPTBN5Q9NRC6 3674 aaKnown RBP3.8□□□□□ -1.8
ABCA1-202ENST00000374736 VCANP13611 3396 aa3.78□□□□□ -1.8
ABCA1-202ENST00000374736 KRTAP3-3Q9BYR6 98 aa3.75□□□□□ -1.81
ABCA1-202ENST00000374736 COL6A3P12111 3177 aa3.74□□□□□ -1.81
ABCA1-202ENST00000374736 USP34Q70CQ2 3546 aa3.74□□□□□ -1.81
ABCA1-202ENST00000374736 ZFHX4Q86UP3 3567 aa3.73□□□□□ -1.81
ABCA1-202ENST00000374736 KRTAP12-3P60328 96 aa3.72□□□□□ -1.81
ABCA1-202ENST00000374736 AKAP9Q99996 3911 aa3.7□□□□□ -1.82
ABCA1-202ENST00000374736 KRTAP10-12P60413 245 aa3.7□□□□□ -1.82
ABCA1-202ENST00000374736 DNAH14Q0VDD8 3507 aa3.7□□□□□ -1.82
ABCA1-202ENST00000374736 SPRR5A0A1B0GTR4 108 aa3.69□□□□□ -1.82
ABCA1-202ENST00000374736 MKI67P46013 3256 aaKnown RBP3.67□□□□□ -1.82
ABCA1-202ENST00000374736 SPENQ96T58 3664 aaKnown RBP3.65□□□□□ -1.83
ABCA1-202ENST00000374736 LAMA3Q16787 3333 aa3.63□□□□□ -1.83
ABCA1-202ENST00000374736 DCHS1Q96JQ0 3298 aa3.6□□□□□ -1.83
ABCA1-202ENST00000374736 DMDP11532 3685 aa3.58□□□□□ -1.84
ABCA1-202ENST00000374736 CELSR3Q9NYQ7 3312 aa3.58□□□□□ -1.84
ABCA1-202ENST00000374736 KRTAP10-10P60014 251 aa3.57□□□□□ -1.84
ABCA1-202ENST00000374736 BRCA2P51587 3418 aa3.56□□□□□ -1.84
ABCA1-202ENST00000374736 LAMA5O15230 3695 aa3.53□□□□□ -1.84
ABCA1-202ENST00000374736 BSNQ9UPA5 3926 aa3.51□□□□□ -1.85
ABCA1-202ENST00000374736 SMG1Q96Q15 3661 aaKnown RBP3.51□□□□□ -1.85
ABCA1-202ENST00000374736 DNAH3Q8TD57 4116 aa3.5□□□□□ -1.85
ABCA1-202ENST00000374736 A0A1B0GVY2 172 aa3.49□□□□□ -1.85
ABCA1-202ENST00000374736 LCE3AQ5TA76 89 aa3.48□□□□□ -1.85
ABCA1-202ENST00000374736 CDH23Q9H251 3354 aa3.48□□□□□ -1.85
ABCA1-202ENST00000374736 SZT2Q5T011 3432 aa3.47□□□□□ -1.85
ABCA1-202ENST00000374736 ASPMQ8IZT6 3477 aa3.46□□□□□ -1.86
ABCA1-202ENST00000374736 MYO15AQ9UKN7 3530 aa3.42□□□□□ -1.86
ABCA1-202ENST00000374736 LOC400499M0QZD8 3231 aa3.41□□□□□ -1.86
ABCA1-202ENST00000374736 WDFY3Q8IZQ1 3526 aa3.41□□□□□ -1.86
ABCA1-202ENST00000374736 LYSTQ99698 3801 aa3.4□□□□□ -1.87
ABCA1-202ENST00000374736 KRTAP10-5P60370 271 aa3.4□□□□□ -1.87
ABCA1-202ENST00000374736 TRRAPQ9Y4A5 3859 aa3.39□□□□□ -1.87
ABCA1-202ENST00000374736 EYSQ5T1H1 3165 aa3.38□□□□□ -1.87
ABCA1-202ENST00000374736 VPS13CQ709C8 3753 aa3.38□□□□□ -1.87
ABCA1-202ENST00000374736 KRTAP8-1Q8IUC2 63 aa3.37□□□□□ -1.87
ABCA1-202ENST00000374736 SPEGQ15772 3267 aa3.35□□□□□ -1.87
ABCA1-202ENST00000374736 CSMD1Q96PZ7 3565 aa3.33□□□□□ -1.88
ABCA1-202ENST00000374736 LCE3CQ5T5A8 94 aa3.32□□□□□ -1.88
ABCA1-202ENST00000374736 CMYA5Q8N3K9 4069 aa3.31□□□□□ -1.88
ABCA1-202ENST00000374736 RELNP78509 3460 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms