RNA–Protein interactions for RNA: ENST00000374001.6

A1CF-205, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene A1CF, Length 9,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-205ENST00000374001 CSAG1Q6PB30 78 aa3.15□□□□□ -1.9
A1CF-205ENST00000374001 PRR26Q8N8Z3 221 aa3.15□□□□□ -1.91
A1CF-205ENST00000374001 TENM2Q9NT68 2774 aa3.15□□□□□ -1.91
A1CF-205ENST00000374001 KRTAP29-1A8MX34 341 aaPredicted RBP3.14□□□□□ -1.91
A1CF-205ENST00000374001 Q8N1X5 172 aa3.14□□□□□ -1.91
A1CF-205ENST00000374001 FBN1P35555 2871 aaKnown RBP3.13□□□□□ -1.91
A1CF-205ENST00000374001 Q6ZRN7 208 aaPredicted RBP3.13□□□□□ -1.91
A1CF-205ENST00000374001 WDFY3Q8IZQ1 3526 aa3.13□□□□□ -1.91
A1CF-205ENST00000374001 OXTP01178 125 aa3.12□□□□□ -1.91
A1CF-205ENST00000374001 S4R3F8 94 aa3.12□□□□□ -1.91
A1CF-205ENST00000374001 SPINK7P58062 85 aa3.11□□□□□ -1.91
A1CF-205ENST00000374001 LUZP6Q538Z0 58 aa3.11□□□□□ -1.91
A1CF-205ENST00000374001 LAMA5O15230 3695 aa3.11□□□□□ -1.91
A1CF-205ENST00000374001 CAMK2N1Q7Z7J9 78 aa3.1□□□□□ -1.91
A1CF-205ENST00000374001 Q5VV11 94 aa3.1□□□□□ -1.91
A1CF-205ENST00000374001 KRTAP13-1Q8IUC0 172 aa3.1□□□□□ -1.91
A1CF-205ENST00000374001 KRTAP10-1P60331 282 aa3.09□□□□□ -1.91
A1CF-205ENST00000374001 LINC01554Q52M75 96 aa3.09□□□□□ -1.91
A1CF-205ENST00000374001 SPENQ96T58 3664 aaKnown RBP3.09□□□□□ -1.91
A1CF-205ENST00000374001 NBPF19A0A087WUL8 3843 aa3.09□□□□□ -1.91
A1CF-205ENST00000374001 A0A087X002 238 aa3.08□□□□□ -1.92
A1CF-205ENST00000374001 ZFHX3Q15911 3703 aa3.07□□□□□ -1.92
A1CF-205ENST00000374001 KRTAP10-2P60368 255 aa3.07□□□□□ -1.92
A1CF-205ENST00000374001 CYSTM1Q9H1C7 97 aa3.06□□□□□ -1.92
A1CF-205ENST00000374001 OTOGQ6ZRI0 2925 aa3.06□□□□□ -1.92
A1CF-205ENST00000374001 RPL37P61927 97 aaKnown RBP3.05□□□□□ -1.92
A1CF-205ENST00000374001 DMDP11532 3685 aa3.05□□□□□ -1.92
A1CF-205ENST00000374001 DCHS1Q96JQ0 3298 aa3.05□□□□□ -1.92
A1CF-205ENST00000374001 SRRM2Q9UQ35 2752 aaKnown RBP3.04□□□□□ -1.92
A1CF-205ENST00000374001 R4GN34 69 aa3.04□□□□□ -1.92
A1CF-205ENST00000374001 COL7A1Q02388 2944 aa3.04□□□□□ -1.92
A1CF-205ENST00000374001 A0A0D9SG42 100 aa3.04□□□□□ -1.92
A1CF-205ENST00000374001 PANO1I0J062 215 aa3.04□□□□□ -1.92
A1CF-205ENST00000374001 ZFHX4Q86UP3 3567 aa3.03□□□□□ -1.92
A1CF-205ENST00000374001 H1FX-AS1Q4G0G2 97 aa3.02□□□□□ -1.93
A1CF-205ENST00000374001 SPATA8Q6RVD6 105 aa3.02□□□□□ -1.93
A1CF-205ENST00000374001 M0QZ58 72 aa3.02□□□□□ -1.93
A1CF-205ENST00000374001 ROMO1P60602 79 aa3.01□□□□□ -1.93
A1CF-205ENST00000374001 KRTAP7-1Q8IUC3 87 aa3.01□□□□□ -1.93
A1CF-205ENST00000374001 RELNP78509 3460 aa3.01□□□□□ -1.93
A1CF-205ENST00000374001 PLAC4Q8WY50 150 aa3□□□□□ -1.93
A1CF-205ENST00000374001 A8MUU9 505 aa3□□□□□ -1.93
A1CF-205ENST00000374001 NOTCH2NLQ7Z3S9 236 aa3□□□□□ -1.93
A1CF-205ENST00000374001 MEGF8Q7Z7M0 2845 aa2.99□□□□□ -1.93
A1CF-205ENST00000374001 C20orf166-AS1Q96NR2 134 aa2.98□□□□□ -1.93
A1CF-205ENST00000374001 ASPMQ8IZT6 3477 aa2.98□□□□□ -1.93
A1CF-205ENST00000374001 MUC3AQ02505 3323 aa2.97□□□□□ -1.93
A1CF-205ENST00000374001 KRTAP13-2Q52LG2 175 aa2.97□□□□□ -1.93
A1CF-205ENST00000374001 KRTAP11-1Q8IUC1 163 aa2.97□□□□□ -1.93
A1CF-205ENST00000374001 FBN3Q75N90 2809 aa2.95□□□□□ -1.94
A1CF-205ENST00000374001 A0A0A0MQY5 61 aa2.95□□□□□ -1.94
A1CF-205ENST00000374001 TRRAPQ9Y4A5 3859 aa2.94□□□□□ -1.94
A1CF-205ENST00000374001 SMG1Q96Q15 3661 aaKnown RBP2.94□□□□□ -1.94
A1CF-205ENST00000374001 BSNQ9UPA5 3926 aa2.92□□□□□ -1.94
A1CF-205ENST00000374001 ADM2Q7Z4H4 148 aa2.92□□□□□ -1.94
A1CF-205ENST00000374001 A6NN06 94 aa2.9□□□□□ -1.95
A1CF-205ENST00000374001 TPRXLQ17RH7 258 aa2.89□□□□□ -1.95
A1CF-205ENST00000374001 KRTAP1-4P0C5Y4 121 aa2.89□□□□□ -1.95
A1CF-205ENST00000374001 VPS13CQ709C8 3753 aa2.89□□□□□ -1.95
A1CF-205ENST00000374001 PP632Q6XCG6 107 aa2.87□□□□□ -1.95
A1CF-205ENST00000374001 AKAP9Q99996 3911 aa2.87□□□□□ -1.95
A1CF-205ENST00000374001 CSMD1Q96PZ7 3565 aa2.85□□□□□ -1.95
A1CF-205ENST00000374001 PRAC1Q96KF2 57 aa2.85□□□□□ -1.95
A1CF-205ENST00000374001 KRTAP25-1Q3LHN0 102 aa2.85□□□□□ -1.95
A1CF-205ENST00000374001 SVEP1Q4LDE5 3571 aa2.82□□□□□ -1.96
A1CF-205ENST00000374001 XP32Q5T750 250 aa2.82□□□□□ -1.96
A1CF-205ENST00000374001 KRTAP16-1A8MUX0 517 aa2.82□□□□□ -1.96
A1CF-205ENST00000374001 TNP1P09430 55 aa2.82□□□□□ -1.96
A1CF-205ENST00000374001 KRTAP13-3Q3SY46 172 aa2.78□□□□□ -1.96
A1CF-205ENST00000374001 A0A1B0GVY2 172 aa2.75□□□□□ -1.97
A1CF-205ENST00000374001 H3BS24 57 aa2.75□□□□□ -1.97
A1CF-205ENST00000374001 H0YAA0 97 aa2.75□□□□□ -1.97
A1CF-205ENST00000374001 KRTAP10-8P60410 259 aa2.75□□□□□ -1.97
A1CF-205ENST00000374001 P0C880 135 aa2.74□□□□□ -1.97
A1CF-205ENST00000374001 A8MU10 97 aa2.74□□□□□ -1.97
A1CF-205ENST00000374001 ZNF469Q96JG9 3925 aaPredicted RBP2.74□□□□□ -1.97
A1CF-205ENST00000374001 PRO2289Q9P1D8 64 aa2.72□□□□□ -1.97
A1CF-205ENST00000374001 CUBNO60494 3623 aa2.72□□□□□ -1.97
A1CF-205ENST00000374001 CSMD2Q7Z408 3487 aa2.68□□□□□ -1.98
A1CF-205ENST00000374001 ANK3Q12955 4377 aaKnown RBP2.63□□□□□ -1.99
A1CF-205ENST00000374001 NDUFAF8A1L188 74 aa2.61□□□□□ -1.99
A1CF-205ENST00000374001 KRTAP13-4Q3LI77 160 aa2.59□□□□□ -2
A1CF-205ENST00000374001 KRTAP10-10P60014 251 aa2.59□□□□□ -2
A1CF-205ENST00000374001 C10orf95Q9H7T3 257 aa2.58□□□□□ -2
A1CF-205ENST00000374001 ALMS1Q8TCU4 4167 aa2.58□□□□□ -2
A1CF-205ENST00000374001 CSMD3Q7Z407 3707 aa2.58□□□□□ -2
A1CF-205ENST00000374001 HECTD4Q9Y4D8 3996 aa2.55□□□□□ -2
A1CF-205ENST00000374001 ANK2Q01484 3957 aa2.55□□□□□ -2
A1CF-205ENST00000374001 KRTAP12-1P59990 96 aa2.54□□□□□ -2
A1CF-205ENST00000374001 KRTAP3-1Q9BYR8 98 aa2.53□□□□□ -2
A1CF-205ENST00000374001 DNAH3Q8TD57 4116 aa2.53□□□□□ -2
A1CF-205ENST00000374001 LYSTQ99698 3801 aa2.52□□□□□ -2.01
A1CF-205ENST00000374001 DNAH1Q9P2D7 4330 aa2.52□□□□□ -2.01
A1CF-205ENST00000374001 DNAH7Q8WXX0 4024 aa2.52□□□□□ -2.01
A1CF-205ENST00000374001 KRTAP12-2P59991 146 aa2.52□□□□□ -2.01
A1CF-205ENST00000374001 KRTAP23-1A1A580 65 aa2.51□□□□□ -2.01
A1CF-205ENST00000374001 CMYA5Q8N3K9 4069 aa2.51□□□□□ -2.01
A1CF-205ENST00000374001 KRTAP10-6P60371 365 aaPredicted RBP2.5□□□□□ -2.01
A1CF-205ENST00000374001 KRTAP10-4P60372 401 aaPredicted RBP2.49□□□□□ -2.01
A1CF-205ENST00000374001 MT1HL1P0DM35 61 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms