RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 FLNCQ14315 2725 aa9.89□□□□□ -0.83
CACNA1A-201ENST00000360228 RPS29P62273 56 aaKnown RBP9.89□□□□□ -0.83
CACNA1A-201ENST00000360228 KRTAP11-1Q8IUC1 163 aa9.89□□□□□ -0.83
CACNA1A-201ENST00000360228 NOTCH2NLQ7Z3S9 236 aa9.88□□□□□ -0.83
CACNA1A-201ENST00000360228 NIPBLQ6KC79 2804 aaeCLIP9.88□□□□□ -0.83
CACNA1A-201ENST00000360228 PDZD2O15018 2839 aa9.87□□□□□ -0.83
CACNA1A-201ENST00000360228 TENM1Q9UKZ4 2725 aa9.87□□□□□ -0.83
CACNA1A-201ENST00000360228 LAMA1P25391 3075 aa9.85□□□□□ -0.83
CACNA1A-201ENST00000360228 CELSR2Q9HCU4 2923 aa9.85□□□□□ -0.83
CACNA1A-201ENST00000360228 CDH23Q9H251 3354 aa9.84□□□□□ -0.83
CACNA1A-201ENST00000360228 COL6A3P12111 3177 aa9.84□□□□□ -0.83
CACNA1A-201ENST00000360228 KRTAP4-16G5E9R7 235 aaPredicted RBP9.82□□□□□ -0.84
CACNA1A-201ENST00000360228 USP34Q70CQ2 3546 aa9.81□□□□□ -0.84
CACNA1A-201ENST00000360228 SPEGQ15772 3267 aa9.77□□□□□ -0.85
CACNA1A-201ENST00000360228 NBEAQ8NFP9 2946 aa9.77□□□□□ -0.85
CACNA1A-201ENST00000360228 CFAP47Q6ZTR5 3102 aa9.76□□□□□ -0.85
CACNA1A-201ENST00000360228 TGP01266 2768 aa9.75□□□□□ -0.85
CACNA1A-201ENST00000360228 HIVEP1P15822 2718 aa9.74□□□□□ -0.85
CACNA1A-201ENST00000360228 ZZEF1O43149 2961 aa9.73□□□□□ -0.85
CACNA1A-201ENST00000360228 SRRM2Q9UQ35 2752 aaKnown RBP9.7□□□□□ -0.86
CACNA1A-201ENST00000360228 BOD1L1Q8NFC6 3051 aa9.69□□□□□ -0.86
CACNA1A-201ENST00000360228 VCANP13611 3396 aa9.69□□□□□ -0.86
CACNA1A-201ENST00000360228 P0C880 135 aa9.68□□□□□ -0.86
CACNA1A-201ENST00000360228 ATMQ13315 3056 aa9.67□□□□□ -0.86
CACNA1A-201ENST00000360228 KRTAP10-8P60410 259 aa9.66□□□□□ -0.86
CACNA1A-201ENST00000360228 SZT2Q5T011 3432 aa9.62□□□□□ -0.87
CACNA1A-201ENST00000360228 TNRC18O15417 2968 aaPredicted RBP9.58□□□□□ -0.88
CACNA1A-201ENST00000360228 DMXL1Q9Y485 3027 aa9.53□□□□□ -0.88
CACNA1A-201ENST00000360228 ADGRG4Q8IZF6 3080 aa9.52□□□□□ -0.88
CACNA1A-201ENST00000360228 Q6ZRN7 208 aaPredicted RBP9.48□□□□□ -0.89
CACNA1A-201ENST00000360228 WDFY3Q8IZQ1 3526 aa9.47□□□□□ -0.89
CACNA1A-201ENST00000360228 DCHS2Q6V1P9 2916 aa9.45□□□□□ -0.9
CACNA1A-201ENST00000360228 KRTAP13-2Q52LG2 175 aa9.44□□□□□ -0.9
CACNA1A-201ENST00000360228 PRO2289Q9P1D8 64 aa9.42□□□□□ -0.9
CACNA1A-201ENST00000360228 CELSR1Q9NYQ6 3014 aa9.4□□□□□ -0.9
CACNA1A-201ENST00000360228 A0A1B0GVY2 172 aa9.4□□□□□ -0.91
CACNA1A-201ENST00000360228 SPTBN5Q9NRC6 3674 aaKnown RBP9.33□□□□□ -0.92
CACNA1A-201ENST00000360228 ZANQ9Y493 2812 aa9.33□□□□□ -0.92
CACNA1A-201ENST00000360228 ASPMQ8IZT6 3477 aa9.31□□□□□ -0.92
CACNA1A-201ENST00000360228 H0YAA0 97 aa9.31□□□□□ -0.92
CACNA1A-201ENST00000360228 MYO15AQ9UKN7 3530 aa9.28□□□□□ -0.92
CACNA1A-201ENST00000360228 ZFHX4Q86UP3 3567 aa9.24□□□□□ -0.93
CACNA1A-201ENST00000360228 FBN2P35556 2912 aa9.24□□□□□ -0.93
CACNA1A-201ENST00000360228 KRTAP7-1Q8IUC3 87 aa9.24□□□□□ -0.93
CACNA1A-201ENST00000360228 KRTAP13-1Q8IUC0 172 aa9.23□□□□□ -0.93
CACNA1A-201ENST00000360228 KRTAP10-10P60014 251 aa9.2□□□□□ -0.94
CACNA1A-201ENST00000360228 NBPF19A0A087WUL8 3843 aa9.2□□□□□ -0.94
CACNA1A-201ENST00000360228 LAMA5O15230 3695 aa9.19□□□□□ -0.94
CACNA1A-201ENST00000360228 LOC400499M0QZD8 3231 aa9.17□□□□□ -0.94
CACNA1A-201ENST00000360228 TENM4Q6N022 2769 aa9.11□□□□□ -0.95
CACNA1A-201ENST00000360228 XP32Q5T750 250 aa9.11□□□□□ -0.95
CACNA1A-201ENST00000360228 MXRA5Q9NR99 2828 aa9.1□□□□□ -0.95
CACNA1A-201ENST00000360228 EYSQ5T1H1 3165 aa9.1□□□□□ -0.95
CACNA1A-201ENST00000360228 VWFP04275 2813 aa9.08□□□□□ -0.96
CACNA1A-201ENST00000360228 TENM2Q9NT68 2774 aa9.07□□□□□ -0.96
CACNA1A-201ENST00000360228 DCHS1Q96JQ0 3298 aa9.03□□□□□ -0.96
CACNA1A-201ENST00000360228 PKD1L1Q8TDX9 2849 aa9.03□□□□□ -0.96
CACNA1A-201ENST00000360228 COL7A1Q02388 2944 aa8.98□□□□□ -0.97
CACNA1A-201ENST00000360228 HRNRQ86YZ3 2850 aaPredicted RBP8.91□□□□□ -0.98
CACNA1A-201ENST00000360228 SPENQ96T58 3664 aaKnown RBP8.91□□□□□ -0.98
CACNA1A-201ENST00000360228 RELNP78509 3460 aa8.91□□□□□ -0.98
CACNA1A-201ENST00000360228 TPRXLQ17RH7 258 aa8.89□□□□□ -0.99
CACNA1A-201ENST00000360228 SMG1Q96Q15 3661 aaKnown RBP8.89□□□□□ -0.99
CACNA1A-201ENST00000360228 CSMD1Q96PZ7 3565 aa8.87□□□□□ -0.99
CACNA1A-201ENST00000360228 INE1O15225 51 aa8.85□□□□□ -0.99
CACNA1A-201ENST00000360228 KRTAP12-2P59991 146 aa8.84□□□□□ -0.99
CACNA1A-201ENST00000360228 ZFHX3Q15911 3703 aa8.8□□□□□ -1
CACNA1A-201ENST00000360228 DMDP11532 3685 aa8.76□□□□□ -1.01
CACNA1A-201ENST00000360228 KRTAP1-4P0C5Y4 121 aa8.76□□□□□ -1.01
CACNA1A-201ENST00000360228 KRTAP13-4Q3LI77 160 aa8.72□□□□□ -1.01
CACNA1A-201ENST00000360228 MEGF8Q7Z7M0 2845 aa8.69□□□□□ -1.02
CACNA1A-201ENST00000360228 KRTAP13-3Q3SY46 172 aa8.63□□□□□ -1.03
CACNA1A-201ENST00000360228 KRTAP15-1Q3LI76 137 aa8.6□□□□□ -1.03
CACNA1A-201ENST00000360228 KRTAP21-3Q3LHN1 58 aa8.57□□□□□ -1.04
CACNA1A-201ENST00000360228 OTOGQ6ZRI0 2925 aa8.54□□□□□ -1.04
CACNA1A-201ENST00000360228 CUBNO60494 3623 aa8.48□□□□□ -1.05
CACNA1A-201ENST00000360228 KRTAP12-1P59990 96 aa8.43□□□□□ -1.06
CACNA1A-201ENST00000360228 FBN3Q75N90 2809 aa8.38□□□□□ -1.07
CACNA1A-201ENST00000360228 SVEP1Q4LDE5 3571 aa8.33□□□□□ -1.08
CACNA1A-201ENST00000360228 VPS13CQ709C8 3753 aa8.32□□□□□ -1.08
CACNA1A-201ENST00000360228 CRCT1Q9UGL9 99 aa8.29□□□□□ -1.08
CACNA1A-201ENST00000360228 FBN1P35555 2871 aaKnown RBP8.18□□□□□ -1.1
CACNA1A-201ENST00000360228 CSMD3Q7Z407 3707 aa8.17□□□□□ -1.1
CACNA1A-201ENST00000360228 TRRAPQ9Y4A5 3859 aa8.1□□□□□ -1.11
CACNA1A-201ENST00000360228 KRTAP23-1A1A580 65 aa8.09□□□□□ -1.11
CACNA1A-201ENST00000360228 MUC3AQ02505 3323 aa8.05□□□□□ -1.12
CACNA1A-201ENST00000360228 AKAP9Q99996 3911 aa8□□□□□ -1.13
CACNA1A-201ENST00000360228 KRTAP10-12P60413 245 aa7.98□□□□□ -1.13
CACNA1A-201ENST00000360228 CSMD2Q7Z408 3487 aa7.96□□□□□ -1.14
CACNA1A-201ENST00000360228 KRTAP3-1Q9BYR8 98 aa7.92□□□□□ -1.14
CACNA1A-201ENST00000360228 KRTAP10-6P60371 365 aaPredicted RBP7.82□□□□□ -1.16
CACNA1A-201ENST00000360228 KRTAP12-3P60328 96 aa7.69□□□□□ -1.18
CACNA1A-201ENST00000360228 KRTAP10-5P60370 271 aa7.66□□□□□ -1.18
CACNA1A-201ENST00000360228 BSNQ9UPA5 3926 aa7.65□□□□□ -1.18
CACNA1A-201ENST00000360228 ALMS1Q8TCU4 4167 aa7.63□□□□□ -1.19
CACNA1A-201ENST00000360228 LCE3AQ5TA76 89 aa7.53□□□□□ -1.2
CACNA1A-201ENST00000360228 KRTAP3-3Q9BYR6 98 aa7.4□□□□□ -1.22
CACNA1A-201ENST00000360228 KRTAP3-2Q9BYR7 98 aa7.4□□□□□ -1.22
CACNA1A-201ENST00000360228 LYSTQ99698 3801 aa7.34□□□□□ -1.23
CACNA1A-201ENST00000360228 KRTAP8-1Q8IUC2 63 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms