RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 DCAF8L2P0C7V8 631 aa28.76■■■□□ 2.2
CACNA1A-201ENST00000360228 PELP1Q8IZL8 1130 aaKnown RBP28.64■■■□□ 2.18
CACNA1A-201ENST00000360228 MYT1Q01538 1121 aa27.59■■■□□ 2.01
CACNA1A-201ENST00000360228 ERICH6Q7L0X2 663 aa27.47■■□□□ 1.99
CACNA1A-201ENST00000360228 EHMT2Q96KQ7 1210 aa27.31■■□□□ 1.96
CACNA1A-201ENST00000360228 CCER1Q8TC90 406 aaPredicted RBP27.23■■□□□ 1.95
CACNA1A-201ENST00000360228 SUPT5HO00267 1087 aaKnown RBP27.22■■□□□ 1.95
CACNA1A-201ENST00000360228 APLP2Q06481 763 aa26.87■■□□□ 1.89
CACNA1A-201ENST00000360228 CENPBP07199 599 aaPredicted RBP26.58■■□□□ 1.85
CACNA1A-201ENST00000360228 YTHDC1Q96MU7 727 aaKnown RBP26.51■■□□□ 1.83
CACNA1A-201ENST00000360228 TTBK1Q5TCY1 1321 aaPredicted RBP26.5■■□□□ 1.83
CACNA1A-201ENST00000360228 FAM9AQ8IZU1 332 aaPredicted RBP26.46■■□□□ 1.83
CACNA1A-201ENST00000360228 SHROOM4Q9ULL8 1493 aa26.41■■□□□ 1.82
CACNA1A-201ENST00000360228 NEFLP07196 543 aa26.3■■□□□ 1.8
CACNA1A-201ENST00000360228 PCGF6Q9BYE7 350 aa26.27■■□□□ 1.8
CACNA1A-201ENST00000360228 DAXXQ9UER7 740 aaPredicted RBP26.1■■□□□ 1.77
CACNA1A-201ENST00000360228 RANGAP1P46060 587 aaPredicted RBP25.93■■□□□ 1.74
CACNA1A-201ENST00000360228 ATP1B4Q9UN42 357 aaPredicted RBP25.89■■□□□ 1.74
CACNA1A-201ENST00000360228 ZEB1P37275 1124 aaPredicted RBP25.83■■□□□ 1.72
CACNA1A-201ENST00000360228 ZNF316A6NFI3 1004 aaPredicted RBP25.42■■□□□ 1.66
CACNA1A-201ENST00000360228 RTL5Q5HYW3 569 aaPredicted RBP25.33■■□□□ 1.65
CACNA1A-201ENST00000360228 POLR3GLQ9BT43 218 aa25.32■■□□□ 1.64
CACNA1A-201ENST00000360228 UBTFP17480 764 aaKnown RBP25.21■■□□□ 1.63
CACNA1A-201ENST00000360228 CLSPNQ9HAW4 1339 aa25.18■■□□□ 1.62
CACNA1A-201ENST00000360228 CNGB1Q14028 1251 aaPredicted RBP25.12■■□□□ 1.61
CACNA1A-201ENST00000360228 MYT1LQ9UL68 1186 aa25.1■■□□□ 1.61
CACNA1A-201ENST00000360228 TRIM41Q8WV44 630 aa25.07■■□□□ 1.6
CACNA1A-201ENST00000360228 SLC4A1APQ9BWU0 796 aaKnown RBP25.05■■□□□ 1.6
CACNA1A-201ENST00000360228 CHIC1Q5VXU3 224 aa24.96■■□□□ 1.59
CACNA1A-201ENST00000360228 PPARGC1BQ86YN6 1023 aaKnown RBP24.95■■□□□ 1.58
CACNA1A-201ENST00000360228 ITGAEP38570 1179 aa24.79■■□□□ 1.56
CACNA1A-201ENST00000360228 GLIPR1L2Q4G1C9 344 aa24.78■■□□□ 1.56
CACNA1A-201ENST00000360228 NISCHQ9Y2I1 1504 aa24.75■■□□□ 1.55
CACNA1A-201ENST00000360228 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.68■■□□□ 1.54
CACNA1A-201ENST00000360228 HNRNPUL2Q1KMD3 747 aaKnown RBP24.68■■□□□ 1.54
CACNA1A-201ENST00000360228 ZBTB47Q9UFB7 747 aaPredicted RBP24.58■■□□□ 1.52
CACNA1A-201ENST00000360228 HRCP23327 699 aa24.56■■□□□ 1.52
CACNA1A-201ENST00000360228 TRIM26Q12899 539 aaPredicted RBP24.53■■□□□ 1.52
CACNA1A-201ENST00000360228 BCL11AQ9H165 835 aa24.52■■□□□ 1.52
CACNA1A-201ENST00000360228 SLC24A1O60721 1099 aa24.43■■□□□ 1.5
CACNA1A-201ENST00000360228 EIF5BO60841 1220 aaKnown RBP24.38■■□□□ 1.49
CACNA1A-201ENST00000360228 BCANQ96GW7 911 aa24.35■■□□□ 1.49
CACNA1A-201ENST00000360228 CDK11AQ9UQ88 783 aaPredicted RBP24.34■■□□□ 1.49
CACNA1A-201ENST00000360228 DIEXFQ68CQ4 756 aaKnown RBP24.27■■□□□ 1.48
CACNA1A-201ENST00000360228 CANXP27824 592 aaKnown RBP24.25■■□□□ 1.47
CACNA1A-201ENST00000360228 ANP32BQ92688 251 aaKnown RBP24.23■■□□□ 1.47
CACNA1A-201ENST00000360228 ANP32AP39687 249 aaKnown RBP24.1■■□□□ 1.45
CACNA1A-201ENST00000360228 HSP90AA1P07900 732 aaKnown RBP24.01■■□□□ 1.43
CACNA1A-201ENST00000360228 NPM2Q86SE8 214 aaKnown RBP24■■□□□ 1.43
CACNA1A-201ENST00000360228 GTF3C3Q9Y5Q9 886 aa23.99■■□□□ 1.43
CACNA1A-201ENST00000360228 ANP32CO43423 234 aa23.95■■□□□ 1.42
CACNA1A-201ENST00000360228 FAM50AQ14320 339 aaKnown RBP23.94■■□□□ 1.42
CACNA1A-201ENST00000360228 NEFMP07197 916 aa23.93■■□□□ 1.42
CACNA1A-201ENST00000360228 NEUROD1Q13562 356 aa23.93■■□□□ 1.42
CACNA1A-201ENST00000360228 TRIM52Q96A61 297 aa23.93■■□□□ 1.42
CACNA1A-201ENST00000360228 ZNF326Q5BKZ1 582 aaKnown RBP23.91■■□□□ 1.42
CACNA1A-201ENST00000360228 TNNT2P45379 298 aaPredicted RBP23.77■■□□□ 1.4
CACNA1A-201ENST00000360228 ARXQ96QS3 562 aa23.75■■□□□ 1.39
CACNA1A-201ENST00000360228 CDK11BP21127 795 aaKnown RBP23.73■■□□□ 1.39
CACNA1A-201ENST00000360228 LOC105371045A0A1W2PR82 267 aa23.72■■□□□ 1.39
CACNA1A-201ENST00000360228 UPF2Q9HAU5 1272 aaKnown RBP23.7■■□□□ 1.38
CACNA1A-201ENST00000360228 NBR1Q14596 966 aa23.61■■□□□ 1.37
CACNA1A-201ENST00000360228 FKBP8Q14318 412 aa23.32■■□□□ 1.32
CACNA1A-201ENST00000360228 TRIM44Q96DX7 344 aaPredicted RBP23.31■■□□□ 1.32
CACNA1A-201ENST00000360228 ACIN1Q9UKV3 1341 aaKnown RBP23.23■■□□□ 1.31
CACNA1A-201ENST00000360228 TULP1O00294 542 aaPredicted RBP23.2■■□□□ 1.3
CACNA1A-201ENST00000360228 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.18■■□□□ 1.3
CACNA1A-201ENST00000360228 SALL2Q9Y467 1007 aaPredicted RBP23.18■■□□□ 1.3
CACNA1A-201ENST00000360228 CCDC136Q96JN2 1154 aa23.13■■□□□ 1.29
CACNA1A-201ENST00000360228 DNTTIP2Q5QJE6 756 aaKnown RBP23.13■■□□□ 1.29
CACNA1A-201ENST00000360228 NCLP19338 710 aaKnown RBP23.12■■□□□ 1.29
CACNA1A-201ENST00000360228 PLPPR3Q6T4P5 718 aa23.11■■□□□ 1.29
CACNA1A-201ENST00000360228 HNRNPUQ00839 825 aaKnown RBP eCLIP23.1■■□□□ 1.29
CACNA1A-201ENST00000360228 MYH16Q9H6N6 1097 aa23.1■■□□□ 1.29
CACNA1A-201ENST00000360228 FBLN2P98095 1184 aa23.09■■□□□ 1.29
CACNA1A-201ENST00000360228 A0A0G2JS52 829 aa23.09■■□□□ 1.29
CACNA1A-201ENST00000360228 FAM9BQ8IZU0 186 aa23.08■■□□□ 1.29
CACNA1A-201ENST00000360228 ZRSR1Q15695 479 aaKnown RBP23.08■■□□□ 1.28
CACNA1A-201ENST00000360228 ESF1Q9H501 851 aaKnown RBP23.07■■□□□ 1.28
CACNA1A-201ENST00000360228 ANP32EQ9BTT0 268 aa23.07■■□□□ 1.28
CACNA1A-201ENST00000360228 PTMAP06454 111 aaKnown RBP23.06■■□□□ 1.28
CACNA1A-201ENST00000360228 STAG3Q9UJ98 1225 aa23.06■■□□□ 1.28
CACNA1A-201ENST00000360228 SCAF1Q9H7N4 1312 aaKnown RBP23.04■■□□□ 1.28
CACNA1A-201ENST00000360228 TPRNQ4KMQ1 711 aa23.02■■□□□ 1.28
CACNA1A-201ENST00000360228 BECN1Q14457 450 aa22.98■■□□□ 1.27
CACNA1A-201ENST00000360228 AMER1Q5JTC6 1135 aaPredicted RBP22.98■■□□□ 1.27
CACNA1A-201ENST00000360228 GOLGA6L22H0YM25 854 aa22.98■■□□□ 1.27
CACNA1A-201ENST00000360228 ARID3CA6NKF2 412 aa22.96■■□□□ 1.27
CACNA1A-201ENST00000360228 CHGAP10645 457 aaKnown RBP22.95■■□□□ 1.27
CACNA1A-201ENST00000360228 ZNF777Q9ULD5 760 aaPredicted RBP22.94■■□□□ 1.26
CACNA1A-201ENST00000360228 NAP1L5Q96NT1 182 aaPredicted RBP22.93■■□□□ 1.26
CACNA1A-201ENST00000360228 NCBP3Q53F19 620 aaKnown RBP22.92■■□□□ 1.26
CACNA1A-201ENST00000360228 WDR43Q15061 677 aaKnown RBP eCLIP22.91■■□□□ 1.26
CACNA1A-201ENST00000360228 ERICH6BQ5W0A0 696 aa22.91■■□□□ 1.26
CACNA1A-201ENST00000360228 TMC1Q8TDI8 760 aa22.91■■□□□ 1.26
CACNA1A-201ENST00000360228 DDRGK1Q96HY6 314 aa22.88■■□□□ 1.25
CACNA1A-201ENST00000360228 TONSLQ96HA7 1378 aa22.85■■□□□ 1.25
CACNA1A-201ENST00000360228 IRX6P78412 446 aaPredicted RBP22.79■■□□□ 1.24
CACNA1A-201ENST00000360228 TAOK2Q9UL54 1235 aa22.78■■□□□ 1.24
CACNA1A-201ENST00000360228 RTN4Q9NQC3 1192 aaKnown RBP22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms