RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 DCAF8L2P0C7V8 631 aa28.76■■■□□ 2.2
CACNA1A-201ENST00000360228 PELP1Q8IZL8 1130 aaKnown RBP28.64■■■□□ 2.18
CACNA1A-201ENST00000360228 MYT1Q01538 1121 aa27.59■■■□□ 2.01
CACNA1A-201ENST00000360228 ERICH6Q7L0X2 663 aa27.47■■□□□ 1.99
CACNA1A-201ENST00000360228 EHMT2Q96KQ7 1210 aa27.31■■□□□ 1.96
CACNA1A-201ENST00000360228 CCER1Q8TC90 406 aaPredicted RBP27.23■■□□□ 1.95
CACNA1A-201ENST00000360228 SUPT5HO00267 1087 aaKnown RBP27.22■■□□□ 1.95
CACNA1A-201ENST00000360228 APLP2Q06481 763 aa26.87■■□□□ 1.89
CACNA1A-201ENST00000360228 CENPBP07199 599 aaPredicted RBP26.58■■□□□ 1.85
CACNA1A-201ENST00000360228 YTHDC1Q96MU7 727 aaKnown RBP26.51■■□□□ 1.83
CACNA1A-201ENST00000360228 TTBK1Q5TCY1 1321 aaPredicted RBP26.5■■□□□ 1.83
CACNA1A-201ENST00000360228 FAM9AQ8IZU1 332 aaPredicted RBP26.46■■□□□ 1.83
CACNA1A-201ENST00000360228 SHROOM4Q9ULL8 1493 aa26.41■■□□□ 1.82
CACNA1A-201ENST00000360228 NEFLP07196 543 aa26.3■■□□□ 1.8
CACNA1A-201ENST00000360228 PCGF6Q9BYE7 350 aa26.27■■□□□ 1.8
CACNA1A-201ENST00000360228 DAXXQ9UER7 740 aaPredicted RBP26.1■■□□□ 1.77
CACNA1A-201ENST00000360228 RANGAP1P46060 587 aaPredicted RBP25.93■■□□□ 1.74
CACNA1A-201ENST00000360228 ATP1B4Q9UN42 357 aaPredicted RBP25.89■■□□□ 1.74
CACNA1A-201ENST00000360228 ZEB1P37275 1124 aaPredicted RBP25.83■■□□□ 1.72
CACNA1A-201ENST00000360228 ZNF316A6NFI3 1004 aaPredicted RBP25.42■■□□□ 1.66
CACNA1A-201ENST00000360228 RTL5Q5HYW3 569 aaPredicted RBP25.33■■□□□ 1.65
CACNA1A-201ENST00000360228 POLR3GLQ9BT43 218 aa25.32■■□□□ 1.64
CACNA1A-201ENST00000360228 UBTFP17480 764 aaKnown RBP25.21■■□□□ 1.63
CACNA1A-201ENST00000360228 CLSPNQ9HAW4 1339 aa25.18■■□□□ 1.62
CACNA1A-201ENST00000360228 CNGB1Q14028 1251 aaPredicted RBP25.12■■□□□ 1.61
CACNA1A-201ENST00000360228 MYT1LQ9UL68 1186 aa25.1■■□□□ 1.61
CACNA1A-201ENST00000360228 TRIM41Q8WV44 630 aa25.07■■□□□ 1.6
CACNA1A-201ENST00000360228 SLC4A1APQ9BWU0 796 aaKnown RBP25.05■■□□□ 1.6
CACNA1A-201ENST00000360228 CHIC1Q5VXU3 224 aa24.96■■□□□ 1.59
CACNA1A-201ENST00000360228 PPARGC1BQ86YN6 1023 aaKnown RBP24.95■■□□□ 1.58
CACNA1A-201ENST00000360228 ITGAEP38570 1179 aa24.79■■□□□ 1.56
CACNA1A-201ENST00000360228 GLIPR1L2Q4G1C9 344 aa24.78■■□□□ 1.56
CACNA1A-201ENST00000360228 NISCHQ9Y2I1 1504 aa24.75■■□□□ 1.55
CACNA1A-201ENST00000360228 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.68■■□□□ 1.54
CACNA1A-201ENST00000360228 HNRNPUL2Q1KMD3 747 aaKnown RBP24.68■■□□□ 1.54
CACNA1A-201ENST00000360228 ZBTB47Q9UFB7 747 aaPredicted RBP24.58■■□□□ 1.52
CACNA1A-201ENST00000360228 HRCP23327 699 aa24.56■■□□□ 1.52
CACNA1A-201ENST00000360228 TRIM26Q12899 539 aaPredicted RBP24.53■■□□□ 1.52
CACNA1A-201ENST00000360228 BCL11AQ9H165 835 aa24.52■■□□□ 1.52
CACNA1A-201ENST00000360228 SLC24A1O60721 1099 aa24.43■■□□□ 1.5
CACNA1A-201ENST00000360228 EIF5BO60841 1220 aaKnown RBP24.38■■□□□ 1.49
CACNA1A-201ENST00000360228 BCANQ96GW7 911 aa24.35■■□□□ 1.49
CACNA1A-201ENST00000360228 CDK11AQ9UQ88 783 aaPredicted RBP24.34■■□□□ 1.49
CACNA1A-201ENST00000360228 DIEXFQ68CQ4 756 aaKnown RBP24.27■■□□□ 1.48
CACNA1A-201ENST00000360228 CANXP27824 592 aaKnown RBP24.25■■□□□ 1.47
CACNA1A-201ENST00000360228 ANP32BQ92688 251 aaKnown RBP24.23■■□□□ 1.47
CACNA1A-201ENST00000360228 ANP32AP39687 249 aaKnown RBP24.1■■□□□ 1.45
CACNA1A-201ENST00000360228 HSP90AA1P07900 732 aaKnown RBP24.01■■□□□ 1.43
CACNA1A-201ENST00000360228 NPM2Q86SE8 214 aaKnown RBP24■■□□□ 1.43
CACNA1A-201ENST00000360228 GTF3C3Q9Y5Q9 886 aa23.99■■□□□ 1.43
CACNA1A-201ENST00000360228 ANP32CO43423 234 aa23.95■■□□□ 1.42
CACNA1A-201ENST00000360228 FAM50AQ14320 339 aaKnown RBP23.94■■□□□ 1.42
CACNA1A-201ENST00000360228 NEFMP07197 916 aa23.93■■□□□ 1.42
CACNA1A-201ENST00000360228 NEUROD1Q13562 356 aa23.93■■□□□ 1.42
CACNA1A-201ENST00000360228 TRIM52Q96A61 297 aa23.93■■□□□ 1.42
CACNA1A-201ENST00000360228 ZNF326Q5BKZ1 582 aaKnown RBP23.91■■□□□ 1.42
CACNA1A-201ENST00000360228 TNNT2P45379 298 aaPredicted RBP23.77■■□□□ 1.4
CACNA1A-201ENST00000360228 ARXQ96QS3 562 aa23.75■■□□□ 1.39
CACNA1A-201ENST00000360228 CDK11BP21127 795 aaKnown RBP23.73■■□□□ 1.39
CACNA1A-201ENST00000360228 LOC105371045A0A1W2PR82 267 aa23.72■■□□□ 1.39
CACNA1A-201ENST00000360228 UPF2Q9HAU5 1272 aaKnown RBP23.7■■□□□ 1.38
CACNA1A-201ENST00000360228 NBR1Q14596 966 aa23.61■■□□□ 1.37
CACNA1A-201ENST00000360228 FKBP8Q14318 412 aa23.32■■□□□ 1.32
CACNA1A-201ENST00000360228 TRIM44Q96DX7 344 aaPredicted RBP23.31■■□□□ 1.32
CACNA1A-201ENST00000360228 ACIN1Q9UKV3 1341 aaKnown RBP23.23■■□□□ 1.31
CACNA1A-201ENST00000360228 TULP1O00294 542 aaPredicted RBP23.2■■□□□ 1.3
CACNA1A-201ENST00000360228 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.18■■□□□ 1.3
CACNA1A-201ENST00000360228 SALL2Q9Y467 1007 aaPredicted RBP23.18■■□□□ 1.3
CACNA1A-201ENST00000360228 CCDC136Q96JN2 1154 aa23.13■■□□□ 1.29
CACNA1A-201ENST00000360228 DNTTIP2Q5QJE6 756 aaKnown RBP23.13■■□□□ 1.29
CACNA1A-201ENST00000360228 NCLP19338 710 aaKnown RBP23.12■■□□□ 1.29
CACNA1A-201ENST00000360228 PLPPR3Q6T4P5 718 aa23.11■■□□□ 1.29
CACNA1A-201ENST00000360228 HNRNPUQ00839 825 aaKnown RBP eCLIP23.1■■□□□ 1.29
CACNA1A-201ENST00000360228 MYH16Q9H6N6 1097 aa23.1■■□□□ 1.29
CACNA1A-201ENST00000360228 FBLN2P98095 1184 aa23.09■■□□□ 1.29
CACNA1A-201ENST00000360228 A0A0G2JS52 829 aa23.09■■□□□ 1.29
CACNA1A-201ENST00000360228 FAM9BQ8IZU0 186 aa23.08■■□□□ 1.29
CACNA1A-201ENST00000360228 ZRSR1Q15695 479 aaKnown RBP23.08■■□□□ 1.28
CACNA1A-201ENST00000360228 ESF1Q9H501 851 aaKnown RBP23.07■■□□□ 1.28
CACNA1A-201ENST00000360228 ANP32EQ9BTT0 268 aa23.07■■□□□ 1.28
CACNA1A-201ENST00000360228 PTMAP06454 111 aaKnown RBP23.06■■□□□ 1.28
CACNA1A-201ENST00000360228 STAG3Q9UJ98 1225 aa23.06■■□□□ 1.28
CACNA1A-201ENST00000360228 SCAF1Q9H7N4 1312 aaKnown RBP23.04■■□□□ 1.28
CACNA1A-201ENST00000360228 TPRNQ4KMQ1 711 aa23.02■■□□□ 1.28
CACNA1A-201ENST00000360228 BECN1Q14457 450 aa22.98■■□□□ 1.27
CACNA1A-201ENST00000360228 AMER1Q5JTC6 1135 aaPredicted RBP22.98■■□□□ 1.27
CACNA1A-201ENST00000360228 GOLGA6L22H0YM25 854 aa22.98■■□□□ 1.27
CACNA1A-201ENST00000360228 ARID3CA6NKF2 412 aa22.96■■□□□ 1.27
CACNA1A-201ENST00000360228 CHGAP10645 457 aaKnown RBP22.95■■□□□ 1.27
CACNA1A-201ENST00000360228 ZNF777Q9ULD5 760 aaPredicted RBP22.94■■□□□ 1.26
CACNA1A-201ENST00000360228 NAP1L5Q96NT1 182 aaPredicted RBP22.93■■□□□ 1.26
CACNA1A-201ENST00000360228 NCBP3Q53F19 620 aaKnown RBP22.92■■□□□ 1.26
CACNA1A-201ENST00000360228 WDR43Q15061 677 aaKnown RBP eCLIP22.91■■□□□ 1.26
CACNA1A-201ENST00000360228 ERICH6BQ5W0A0 696 aa22.91■■□□□ 1.26
CACNA1A-201ENST00000360228 TMC1Q8TDI8 760 aa22.91■■□□□ 1.26
CACNA1A-201ENST00000360228 DDRGK1Q96HY6 314 aa22.88■■□□□ 1.25
CACNA1A-201ENST00000360228 TONSLQ96HA7 1378 aa22.85■■□□□ 1.25
CACNA1A-201ENST00000360228 IRX6P78412 446 aaPredicted RBP22.79■■□□□ 1.24
CACNA1A-201ENST00000360228 TAOK2Q9UL54 1235 aa22.78■■□□□ 1.24
CACNA1A-201ENST00000360228 RTN4Q9NQC3 1192 aaKnown RBP22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms