RNA–Protein interactions for RNA: ENST00000359353.9

DDX42-201, Transcript of DEAD-box helicase 42, humanhuman

TSL 5 BASIC

Gene DDX42, Length 2,783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-201ENST00000359353 Q6ZR54 194 aa14.31□□□□□ -0.12
DDX42-201ENST00000359353 LCA10Q71F78 164 aa14.31□□□□□ -0.12
DDX42-201ENST00000359353 MRPL34Q9BQ48 92 aaKnown RBP14.31□□□□□ -0.12
DDX42-201ENST00000359353 DNAH2Q9P225 4427 aa14.31□□□□□ -0.12
DDX42-201ENST00000359353 VPS13DQ5THJ4 4388 aa14.31□□□□□ -0.12
DDX42-201ENST00000359353 IGLV5-52A0A0A0MRZ9 124 aa14.29□□□□□ -0.12
DDX42-201ENST00000359353 RTL8CO15255 209 aa14.29□□□□□ -0.12
DDX42-201ENST00000359353 HRES1P13985 223 aa14.27□□□□□ -0.13
DDX42-201ENST00000359353 MEGF8Q7Z7M0 2845 aa14.26□□□□□ -0.13
DDX42-201ENST00000359353 PRKDCP78527 4128 aaKnown RBP14.26□□□□□ -0.13
DDX42-201ENST00000359353 FBN3Q75N90 2809 aa14.26□□□□□ -0.13
DDX42-201ENST00000359353 SEC61GP60059 68 aa14.25□□□□□ -0.13
DDX42-201ENST00000359353 Q5W150 140 aa14.25□□□□□ -0.13
DDX42-201ENST00000359353 NUPR2A6NF83 97 aa14.23□□□□□ -0.13
DDX42-201ENST00000359353 ZNF861PO60384 105 aa14.23□□□□□ -0.13
DDX42-201ENST00000359353 Q75L30 129 aa14.23□□□□□ -0.13
DDX42-201ENST00000359353 ZNF706Q9Y5V0 76 aaPredicted RBP14.23□□□□□ -0.13
DDX42-201ENST00000359353 CIRBP-AS1Q8TBR5 109 aa14.22□□□□□ -0.13
DDX42-201ENST00000359353 LOC101927531A0A1B0GV80 90 aa14.21□□□□□ -0.14
DDX42-201ENST00000359353 PRR26Q8N8Z3 221 aa14.17□□□□□ -0.14
DDX42-201ENST00000359353 DNHD1Q96M86 4753 aa14.17□□□□□ -0.14
DDX42-201ENST00000359353 RETNLBQ9BQ08 111 aa14.16□□□□□ -0.14
DDX42-201ENST00000359353 DNAH6Q9C0G6 4158 aa14.15□□□□□ -0.14
DDX42-201ENST00000359353 SPINK7P58062 85 aa14.13□□□□□ -0.15
DDX42-201ENST00000359353 PLAC8Q9NZF1 115 aa14.12□□□□□ -0.15
DDX42-201ENST00000359353 LINC01558Q9Y6Z2 57 aa14.12□□□□□ -0.15
DDX42-201ENST00000359353 ALMS1Q8TCU4 4167 aa14.09□□□□□ -0.15
DDX42-201ENST00000359353 DNAH11Q96DT5 4516 aa14.05□□□□□ -0.16
DDX42-201ENST00000359353 IGLV7-43P04211 117 aa14.05□□□□□ -0.16
DDX42-201ENST00000359353 CDC42SE1Q9NRR8 79 aa14.03□□□□□ -0.16
DDX42-201ENST00000359353 ATP11AUNQ6ZP68 121 aa14.03□□□□□ -0.16
DDX42-201ENST00000359353 KRTAP13-3Q3SY46 172 aa14.02□□□□□ -0.16
DDX42-201ENST00000359353 A6NN06 94 aa13.95□□□□□ -0.18
DDX42-201ENST00000359353 KTN1-AS1Q86SY8 53 aa13.95□□□□□ -0.18
DDX42-201ENST00000359353 DNAH5Q8TE73 4624 aa13.94□□□□□ -0.18
DDX42-201ENST00000359353 C1orf134Q5TEV5 83 aa13.91□□□□□ -0.18
DDX42-201ENST00000359353 LY6G6CO95867 125 aa13.88□□□□□ -0.19
DDX42-201ENST00000359353 LINC00313P59037 77 aa13.87□□□□□ -0.19
DDX42-201ENST00000359353 KRTAP10-2P60368 255 aa13.87□□□□□ -0.19
DDX42-201ENST00000359353 ACYP2P14621 99 aa13.86□□□□□ -0.19
DDX42-201ENST00000359353 LRP1BQ9NZR2 4599 aa13.85□□□□□ -0.19
DDX42-201ENST00000359353 KRTAP13-2Q52LG2 175 aa13.82□□□□□ -0.2
DDX42-201ENST00000359353 SSBP3-AS1Q7Z2R9 100 aa13.81□□□□□ -0.2
DDX42-201ENST00000359353 RBM12B-AS1Q9P1G2 102 aa13.8□□□□□ -0.2
DDX42-201ENST00000359353 C8orf87E5RJ46 101 aa13.79□□□□□ -0.2
DDX42-201ENST00000359353 DMAC1Q96GE9 116 aa13.77□□□□□ -0.21
DDX42-201ENST00000359353 FAM229AH3BQW9 127 aa13.74□□□□□ -0.21
DDX42-201ENST00000359353 IGKV2D-30A0A075B6S6 120 aa13.73□□□□□ -0.21
DDX42-201ENST00000359353 IGKV2-30P06310 120 aa13.73□□□□□ -0.21
DDX42-201ENST00000359353 HYDINQ4G0P3 5121 aa13.69□□□□□ -0.22
DDX42-201ENST00000359353 C7orf65Q6ZTY9 151 aa13.68□□□□□ -0.22
DDX42-201ENST00000359353 VPS13BQ7Z7G8 4022 aa13.68□□□□□ -0.22
DDX42-201ENST00000359353 A0A1B0GU69 56 aa13.67□□□□□ -0.22
DDX42-201ENST00000359353 KRTAP16-1A8MUX0 517 aa13.65□□□□□ -0.22
DDX42-201ENST00000359353 KRTAP10-1P60331 282 aa13.64□□□□□ -0.23
DDX42-201ENST00000359353 PRAC1Q96KF2 57 aa13.61□□□□□ -0.23
DDX42-201ENST00000359353 PKD1P98161 4303 aa13.59□□□□□ -0.23
DDX42-201ENST00000359353 ADM2Q7Z4H4 148 aa13.59□□□□□ -0.23
DDX42-201ENST00000359353 FAT2Q9NYQ8 4349 aa13.57□□□□□ -0.24
DDX42-201ENST00000359353 KRTAP1-4P0C5Y4 121 aa13.55□□□□□ -0.24
DDX42-201ENST00000359353 SPINK1P00995 79 aa13.53□□□□□ -0.24
DDX42-201ENST00000359353 Q8N1X5 172 aa13.48□□□□□ -0.25
DDX42-201ENST00000359353 PLA2G1BP04054 148 aaKnown RBP13.47□□□□□ -0.25
DDX42-201ENST00000359353 Q6ZSA8 131 aa13.44□□□□□ -0.26
DDX42-201ENST00000359353 MIR22HGQ0VDD5 57 aa13.43□□□□□ -0.26
DDX42-201ENST00000359353 C4orf48Q5BLP8 95 aa13.43□□□□□ -0.26
DDX42-201ENST00000359353 TYMSOSQ8TAI1 123 aa13.42□□□□□ -0.26
DDX42-201ENST00000359353 SPATA8Q6RVD6 105 aa13.41□□□□□ -0.26
DDX42-201ENST00000359353 PKHD1P08F94 4074 aa13.4□□□□□ -0.26
DDX42-201ENST00000359353 UQCR11O14957 56 aa13.38□□□□□ -0.27
DDX42-201ENST00000359353 C9orf92A6NGG3 77 aa13.25□□□□□ -0.29
DDX42-201ENST00000359353 KRTAP21-3Q3LHN1 58 aa13.21□□□□□ -0.29
DDX42-201ENST00000359353 SMR3BP02814 79 aaPredicted RBP13.21□□□□□ -0.29
DDX42-201ENST00000359353 LINC00304Q8N9R0 145 aa13.19□□□□□ -0.3
DDX42-201ENST00000359353 FAT1Q14517 4588 aa13.17□□□□□ -0.3
DDX42-201ENST00000359353 CSAG1Q6PB30 78 aa13.07□□□□□ -0.32
DDX42-201ENST00000359353 DYNC1H1Q14204 4646 aaKnown RBP13.05□□□□□ -0.32
DDX42-201ENST00000359353 SACSQ9NZJ4 4579 aa13.03□□□□□ -0.32
DDX42-201ENST00000359353 KRTAP3-1Q9BYR8 98 aa13.01□□□□□ -0.33
DDX42-201ENST00000359353 H0YAA0 97 aa13.01□□□□□ -0.33
DDX42-201ENST00000359353 LINC01554Q52M75 96 aa13□□□□□ -0.33
DDX42-201ENST00000359353 FLG2Q5D862 2391 aaPredicted RBP12.98□□□□□ -0.33
DDX42-201ENST00000359353 A8MUU9 505 aa12.89□□□□□ -0.35
DDX42-201ENST00000359353 C20orf166-AS1Q96NR2 134 aa12.88□□□□□ -0.35
DDX42-201ENST00000359353 RPS29P62273 56 aaKnown RBP12.85□□□□□ -0.35
DDX42-201ENST00000359353 PKHD1L1Q86WI1 4243 aa12.85□□□□□ -0.35
DDX42-201ENST00000359353 A0A1B0GU33 70 aa12.85□□□□□ -0.35
DDX42-201ENST00000359353 APOBP04114 4563 aaKnown RBP12.82□□□□□ -0.36
DDX42-201ENST00000359353 DMBT1Q9UGM3 2413 aaPredicted RBP12.79□□□□□ -0.36
DDX42-201ENST00000359353 H1FX-AS1Q4G0G2 97 aa12.76□□□□□ -0.37
DDX42-201ENST00000359353 KMT2CQ8NEZ4 4911 aaKnown RBP12.74□□□□□ -0.37
DDX42-201ENST00000359353 CRIPTQ9P021 101 aa12.71□□□□□ -0.37
DDX42-201ENST00000359353 KRTAP10-4P60372 401 aaPredicted RBP12.71□□□□□ -0.38
DDX42-201ENST00000359353 LRP1Q07954 4544 aaKnown RBP12.71□□□□□ -0.38
DDX42-201ENST00000359353 RYR2Q92736 4967 aa12.64□□□□□ -0.39
DDX42-201ENST00000359353 MYCBP2O75592 4640 aa12.64□□□□□ -0.39
DDX42-201ENST00000359353 COX6B2Q6YFQ2 88 aa12.62□□□□□ -0.39
DDX42-201ENST00000359353 HSPG2P98160 4391 aa12.61□□□□□ -0.39
DDX42-201ENST00000359353 FAT3Q8TDW7 4589 aa12.55□□□□□ -0.4
DDX42-201ENST00000359353 A0A1B0GVY2 172 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms