RNA–Protein interactions for RNA: ENST00000337004.8

PTDSS1-201, Transcript of phosphatidylserine synthase 1, humanhuman

TSL 1 (best)

Gene PTDSS1, Length 2,366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTDSS1-201ENST00000337004 CIRBP-AS1Q8TBR5 109 aa12.67□□□□□ -0.38
PTDSS1-201ENST00000337004 CHKB-CPT1BH3BT56 60 aa12.65□□□□□ -0.38
PTDSS1-201ENST00000337004 HECTD4Q9Y4D8 3996 aa12.65□□□□□ -0.38
PTDSS1-201ENST00000337004 SSBP3-AS1Q7Z2R9 100 aa12.63□□□□□ -0.39
PTDSS1-201ENST00000337004 LOC101927531A0A1B0GV80 90 aa12.62□□□□□ -0.39
PTDSS1-201ENST00000337004 PRKDCP78527 4128 aaKnown RBP12.6□□□□□ -0.39
PTDSS1-201ENST00000337004 DNAH8Q96JB1 4490 aa12.6□□□□□ -0.39
PTDSS1-201ENST00000337004 Q75L30 129 aa12.58□□□□□ -0.4
PTDSS1-201ENST00000337004 FRAS1Q86XX4 4008 aa12.58□□□□□ -0.4
PTDSS1-201ENST00000337004 LY6G6CO95867 125 aa12.57□□□□□ -0.4
PTDSS1-201ENST00000337004 C8orf87E5RJ46 101 aa12.56□□□□□ -0.4
PTDSS1-201ENST00000337004 HRES1P13985 223 aa12.56□□□□□ -0.4
PTDSS1-201ENST00000337004 Q5W150 140 aa12.56□□□□□ -0.4
PTDSS1-201ENST00000337004 KMT2AQ03164 3969 aa12.55□□□□□ -0.4
PTDSS1-201ENST00000337004 DNAH17Q9UFH2 4485 aa12.55□□□□□ -0.4
PTDSS1-201ENST00000337004 DNAH2Q9P225 4427 aa12.54□□□□□ -0.4
PTDSS1-201ENST00000337004 SPAG11AQ6PDA7 123 aa12.53□□□□□ -0.4
PTDSS1-201ENST00000337004 LINC01558Q9Y6Z2 57 aa12.53□□□□□ -0.4
PTDSS1-201ENST00000337004 KRTAP13-3Q3SY46 172 aa12.52□□□□□ -0.4
PTDSS1-201ENST00000337004 A8MU10 97 aa12.49□□□□□ -0.41
PTDSS1-201ENST00000337004 A6NED7 52 aa12.49□□□□□ -0.41
PTDSS1-201ENST00000337004 LINC00313P59037 77 aa12.47□□□□□ -0.41
PTDSS1-201ENST00000337004 KRTAP10-2P60368 255 aa12.47□□□□□ -0.41
PTDSS1-201ENST00000337004 PMAIP1Q13794 54 aa12.45□□□□□ -0.42
PTDSS1-201ENST00000337004 FBN3Q75N90 2809 aa12.44□□□□□ -0.42
PTDSS1-201ENST00000337004 LCA10Q71F78 164 aa12.41□□□□□ -0.42
PTDSS1-201ENST00000337004 MEGF8Q7Z7M0 2845 aa12.4□□□□□ -0.42
PTDSS1-201ENST00000337004 FAM229AH3BQW9 127 aa12.4□□□□□ -0.42
PTDSS1-201ENST00000337004 ACYP2P14621 99 aa12.4□□□□□ -0.43
PTDSS1-201ENST00000337004 KRTAP13-2Q52LG2 175 aa12.39□□□□□ -0.43
PTDSS1-201ENST00000337004 TGP01266 2768 aa12.38□□□□□ -0.43
PTDSS1-201ENST00000337004 ATP11AUNQ6ZP68 121 aa12.37□□□□□ -0.43
PTDSS1-201ENST00000337004 Q6ZSA8 131 aa12.35□□□□□ -0.43
PTDSS1-201ENST00000337004 CDC42SE1Q9NRR8 79 aa12.35□□□□□ -0.43
PTDSS1-201ENST00000337004 SPTSSBQ8NFR3 76 aa12.35□□□□□ -0.43
PTDSS1-201ENST00000337004 PRR26Q8N8Z3 221 aa12.34□□□□□ -0.43
PTDSS1-201ENST00000337004 ALMS1Q8TCU4 4167 aa12.34□□□□□ -0.43
PTDSS1-201ENST00000337004 KRTAP10-1P60331 282 aa12.32□□□□□ -0.44
PTDSS1-201ENST00000337004 DMAC1Q96GE9 116 aa12.31□□□□□ -0.44
PTDSS1-201ENST00000337004 RETNLBQ9BQ08 111 aa12.29□□□□□ -0.44
PTDSS1-201ENST00000337004 IGKV2-30P06310 120 aa12.28□□□□□ -0.44
PTDSS1-201ENST00000337004 DNAH11Q96DT5 4516 aa12.28□□□□□ -0.44
PTDSS1-201ENST00000337004 DNAH6Q9C0G6 4158 aa12.26□□□□□ -0.45
PTDSS1-201ENST00000337004 SPINK7P58062 85 aa12.25□□□□□ -0.45
PTDSS1-201ENST00000337004 KRTAP16-1A8MUX0 517 aa12.25□□□□□ -0.45
PTDSS1-201ENST00000337004 KRTAP1-4P0C5Y4 121 aa12.25□□□□□ -0.45
PTDSS1-201ENST00000337004 DNAH5Q8TE73 4624 aa12.23□□□□□ -0.45
PTDSS1-201ENST00000337004 C4orf48Q5BLP8 95 aa12.2□□□□□ -0.46
PTDSS1-201ENST00000337004 PLA2G1BP04054 148 aaKnown RBP12.16□□□□□ -0.46
PTDSS1-201ENST00000337004 KTN1-AS1Q86SY8 53 aa12.15□□□□□ -0.46
PTDSS1-201ENST00000337004 A6NN06 94 aa12.14□□□□□ -0.47
PTDSS1-201ENST00000337004 SEC61GP60059 68 aa12.14□□□□□ -0.47
PTDSS1-201ENST00000337004 TYMSOSQ8TAI1 123 aa12.14□□□□□ -0.47
PTDSS1-201ENST00000337004 SPINK1P00995 79 aa12.12□□□□□ -0.47
PTDSS1-201ENST00000337004 IGKV2D-30A0A075B6S6 120 aa12.11□□□□□ -0.47
PTDSS1-201ENST00000337004 LRP1BQ9NZR2 4599 aa12.11□□□□□ -0.47
PTDSS1-201ENST00000337004 A0A1B0GU69 56 aa12.07□□□□□ -0.48
PTDSS1-201ENST00000337004 DNHD1Q96M86 4753 aa12.07□□□□□ -0.48
PTDSS1-201ENST00000337004 PKD1P98161 4303 aa12.04□□□□□ -0.48
PTDSS1-201ENST00000337004 C7orf65Q6ZTY9 151 aa12.01□□□□□ -0.49
PTDSS1-201ENST00000337004 FAT2Q9NYQ8 4349 aa11.98□□□□□ -0.49
PTDSS1-201ENST00000337004 RPS29P62273 56 aaKnown RBP11.96□□□□□ -0.49
PTDSS1-201ENST00000337004 KRTAP21-3Q3LHN1 58 aa11.96□□□□□ -0.49
PTDSS1-201ENST00000337004 LINC00304Q8N9R0 145 aa11.96□□□□□ -0.49
PTDSS1-201ENST00000337004 VPS13BQ7Z7G8 4022 aa11.94□□□□□ -0.5
PTDSS1-201ENST00000337004 HYDINQ4G0P3 5121 aa11.92□□□□□ -0.5
PTDSS1-201ENST00000337004 SPATA8Q6RVD6 105 aa11.89□□□□□ -0.51
PTDSS1-201ENST00000337004 UQCR11O14957 56 aa11.87□□□□□ -0.51
PTDSS1-201ENST00000337004 MIR22HGQ0VDD5 57 aa11.84□□□□□ -0.51
PTDSS1-201ENST00000337004 RBM12B-AS1Q9P1G2 102 aa11.83□□□□□ -0.52
PTDSS1-201ENST00000337004 Q8N1X5 172 aa11.81□□□□□ -0.52
PTDSS1-201ENST00000337004 SMR3BP02814 79 aaPredicted RBP11.77□□□□□ -0.53
PTDSS1-201ENST00000337004 C20orf166-AS1Q96NR2 134 aa11.71□□□□□ -0.53
PTDSS1-201ENST00000337004 C9orf92A6NGG3 77 aa11.71□□□□□ -0.54
PTDSS1-201ENST00000337004 A8MUU9 505 aa11.71□□□□□ -0.54
PTDSS1-201ENST00000337004 SACSQ9NZJ4 4579 aa11.63□□□□□ -0.55
PTDSS1-201ENST00000337004 PKHD1P08F94 4074 aa11.61□□□□□ -0.55
PTDSS1-201ENST00000337004 KRTAP10-4P60372 401 aaPredicted RBP11.6□□□□□ -0.55
PTDSS1-201ENST00000337004 A0A1B0GVY2 172 aa11.59□□□□□ -0.55
PTDSS1-201ENST00000337004 PRAC1Q96KF2 57 aa11.56□□□□□ -0.56
PTDSS1-201ENST00000337004 KRTAP3-1Q9BYR8 98 aa11.53□□□□□ -0.56
PTDSS1-201ENST00000337004 ADM2Q7Z4H4 148 aa11.53□□□□□ -0.56
PTDSS1-201ENST00000337004 DYNC1H1Q14204 4646 aaKnown RBP11.51□□□□□ -0.57
PTDSS1-201ENST00000337004 PKHD1L1Q86WI1 4243 aa11.45□□□□□ -0.58
PTDSS1-201ENST00000337004 APOBP04114 4563 aaKnown RBP11.41□□□□□ -0.58
PTDSS1-201ENST00000337004 FAT1Q14517 4588 aa11.4□□□□□ -0.58
PTDSS1-201ENST00000337004 A0A1B0GU33 70 aa11.4□□□□□ -0.58
PTDSS1-201ENST00000337004 H0YAA0 97 aa11.4□□□□□ -0.58
PTDSS1-201ENST00000337004 COX6B2Q6YFQ2 88 aa11.38□□□□□ -0.59
PTDSS1-201ENST00000337004 H1FX-AS1Q4G0G2 97 aa11.34□□□□□ -0.59
PTDSS1-201ENST00000337004 LINC01554Q52M75 96 aa11.26□□□□□ -0.61
PTDSS1-201ENST00000337004 CSAG1Q6PB30 78 aa11.25□□□□□ -0.61
PTDSS1-201ENST00000337004 FLG2Q5D862 2391 aaPredicted RBP11.22□□□□□ -0.61
PTDSS1-201ENST00000337004 KRTAP10-8P60410 259 aa11.21□□□□□ -0.62
PTDSS1-201ENST00000337004 RPL37P61927 97 aaKnown RBP11.14□□□□□ -0.63
PTDSS1-201ENST00000337004 RYR2Q92736 4967 aa11.11□□□□□ -0.63
PTDSS1-201ENST00000337004 K7ERS5 55 aa11.1□□□□□ -0.63
PTDSS1-201ENST00000337004 Q5VSD8 79 aa11.1□□□□□ -0.63
PTDSS1-201ENST00000337004 FAT3Q8TDW7 4589 aa11.08□□□□□ -0.64
PTDSS1-201ENST00000337004 XP32Q5T750 250 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms