RNA–Protein interactions for RNA: ENST00000337004.8

PTDSS1-201, Transcript of phosphatidylserine synthase 1, humanhuman

TSL 1 (best)

Gene PTDSS1, Length 2,366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTDSS1-201ENST00000337004 NISCHQ9Y2I1 1504 aa44.25■■■■■ 4.67
PTDSS1-201ENST00000337004 SHROOM4Q9ULL8 1493 aa37.67■■■■□ 3.62
PTDSS1-201ENST00000337004 CCDC180Q9P1Z9 1646 aa37.56■■■■□ 3.6
PTDSS1-201ENST00000337004 ZCCHC6Q5VYS8 1495 aaKnown RBP37.45■■■■□ 3.59
PTDSS1-201ENST00000337004 SUPT5HO00267 1087 aaKnown RBP37.07■■■■□ 3.52
PTDSS1-201ENST00000337004 DCAF8L2P0C7V8 631 aa36.61■■■■□ 3.45
PTDSS1-201ENST00000337004 DCAF1Q9Y4B6 1507 aa36.39■■■■□ 3.42
PTDSS1-201ENST00000337004 CHIC1Q5VXU3 224 aa36.16■■■■□ 3.38
PTDSS1-201ENST00000337004 MYO15BQ96JP2 1530 aa35.89■■■■□ 3.34
PTDSS1-201ENST00000337004 ABCC9O60706 1549 aa35.32■■■■□ 3.24
PTDSS1-201ENST00000337004 HRCP23327 699 aa35.25■■■■□ 3.23
PTDSS1-201ENST00000337004 SCRIBQ14160 1630 aa35.13■■■■□ 3.21
PTDSS1-201ENST00000337004 PCGF6Q9BYE7 350 aa35.11■■■■□ 3.21
PTDSS1-201ENST00000337004 RSF1Q96T23 1441 aaPredicted RBP35.06■■■■□ 3.2
PTDSS1-201ENST00000337004 LOC105371045A0A1W2PR82 267 aa35.01■■■■□ 3.19
PTDSS1-201ENST00000337004 NACADO15069 1562 aa34.76■■■■□ 3.16
PTDSS1-201ENST00000337004 RB1CC1Q8TDY2 1594 aa34.7■■■■□ 3.15
PTDSS1-201ENST00000337004 TRIM41Q8WV44 630 aa34.62■■■■□ 3.13
PTDSS1-201ENST00000337004 TRIM26Q12899 539 aaPredicted RBP34.54■■■■□ 3.12
PTDSS1-201ENST00000337004 CECR2Q9BXF3 1484 aa34.44■■■■□ 3.1
PTDSS1-201ENST00000337004 MROH2BQ7Z745 1585 aa34.35■■■■□ 3.09
PTDSS1-201ENST00000337004 PPARGC1BQ86YN6 1023 aaKnown RBP34.33■■■■□ 3.09
PTDSS1-201ENST00000337004 FAM9AQ8IZU1 332 aaPredicted RBP34.21■■■■□ 3.07
PTDSS1-201ENST00000337004 WIZO95785 1651 aa34.11■■■■□ 3.05
PTDSS1-201ENST00000337004 BAZ1AQ9NRL2 1556 aaPredicted RBP34■■■■□ 3.03
PTDSS1-201ENST00000337004 ZEB1P37275 1124 aaPredicted RBP33.93■■■■□ 3.02
PTDSS1-201ENST00000337004 EHMT2Q96KQ7 1210 aa33.83■■■■□ 3.01
PTDSS1-201ENST00000337004 EIF4G1Q04637 1599 aaKnown RBP33.73■■■□□ 2.99
PTDSS1-201ENST00000337004 TOP2AP11388 1531 aaKnown RBP33.69■■■□□ 2.98
PTDSS1-201ENST00000337004 SMARCA4P51532 1647 aa33.63■■■□□ 2.97
PTDSS1-201ENST00000337004 CCDC88BA6NC98 1476 aa33.55■■■□□ 2.96
PTDSS1-201ENST00000337004 SMARCA2P51531 1590 aa33.46■■■□□ 2.95
PTDSS1-201ENST00000337004 UNC13AQ9UPW8 1703 aa33.41■■■□□ 2.94
PTDSS1-201ENST00000337004 ABCC8Q09428 1581 aa33.39■■■□□ 2.94
PTDSS1-201ENST00000337004 EEA1Q15075 1411 aa33.2■■■□□ 2.9
PTDSS1-201ENST00000337004 WRNQ14191 1432 aaPredicted RBP eCLIP33.18■■■□□ 2.9
PTDSS1-201ENST00000337004 SOGA1O94964 1423 aa33.17■■■□□ 2.9
PTDSS1-201ENST00000337004 PABPN1Q86U42 306 aaKnown RBP eCLIP33.16■■■□□ 2.9
PTDSS1-201ENST00000337004 TNIKQ9UKE5 1360 aa33.13■■■□□ 2.89
PTDSS1-201ENST00000337004 CEP162Q5TB80 1403 aa33.11■■■□□ 2.89
PTDSS1-201ENST00000337004 BICRAQ9NZM4 1560 aa33.11■■■□□ 2.89
PTDSS1-201ENST00000337004 CSRNP3Q8WYN3 585 aa33.11■■■□□ 2.89
PTDSS1-201ENST00000337004 PEG3Q9GZU2 1588 aa33.05■■■□□ 2.88
PTDSS1-201ENST00000337004 CCER1Q8TC90 406 aaPredicted RBP33.02■■■□□ 2.88
PTDSS1-201ENST00000337004 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.01■■■□□ 2.87
PTDSS1-201ENST00000337004 UBTFP17480 764 aaKnown RBP32.95■■■□□ 2.87
PTDSS1-201ENST00000337004 RUSC2Q8N2Y8 1516 aa32.94■■■□□ 2.86
PTDSS1-201ENST00000337004 GOLGA3Q08378 1498 aa32.89■■■□□ 2.86
PTDSS1-201ENST00000337004 ATAD2BQ9ULI0 1458 aa32.79■■■□□ 2.84
PTDSS1-201ENST00000337004 TTBK1Q5TCY1 1321 aaPredicted RBP32.79■■■□□ 2.84
PTDSS1-201ENST00000337004 BAZ1BQ9UIG0 1483 aaKnown RBP32.72■■■□□ 2.83
PTDSS1-201ENST00000337004 CEP164Q9UPV0 1460 aa32.71■■■□□ 2.83
PTDSS1-201ENST00000337004 SYNJ1O43426 1573 aa32.68■■■□□ 2.82
PTDSS1-201ENST00000337004 KIF21BO75037 1637 aa32.61■■■□□ 2.81
PTDSS1-201ENST00000337004 CLIP1P30622 1438 aa32.5■■■□□ 2.79
PTDSS1-201ENST00000337004 SCAF1Q9H7N4 1312 aaKnown RBP32.45■■■□□ 2.78
PTDSS1-201ENST00000337004 DIEXFQ68CQ4 756 aaKnown RBP32.43■■■□□ 2.78
PTDSS1-201ENST00000337004 VPS8Q8N3P4 1428 aa32.39■■■□□ 2.78
PTDSS1-201ENST00000337004 RAPGEF2Q9Y4G8 1499 aa32.36■■■□□ 2.77
PTDSS1-201ENST00000337004 TOP2BQ02880 1626 aa32.34■■■□□ 2.77
PTDSS1-201ENST00000337004 APLP2Q06481 763 aa32.33■■■□□ 2.77
PTDSS1-201ENST00000337004 HNRNPUL2Q1KMD3 747 aaKnown RBP32.23■■■□□ 2.75
PTDSS1-201ENST00000337004 ACIN1Q9UKV3 1341 aaKnown RBP32.22■■■□□ 2.75
PTDSS1-201ENST00000337004 ZNF316A6NFI3 1004 aaPredicted RBP32.19■■■□□ 2.74
PTDSS1-201ENST00000337004 BIVM-ERCC5R4GMW8 1640 aa32.19■■■□□ 2.74
PTDSS1-201ENST00000337004 NCAPD3P42695 1498 aa32.18■■■□□ 2.74
PTDSS1-201ENST00000337004 HMGXB3Q12766 1538 aa32.15■■■□□ 2.74
PTDSS1-201ENST00000337004 RANGAP1P46060 587 aaPredicted RBP32.14■■■□□ 2.73
PTDSS1-201ENST00000337004 PELP1Q8IZL8 1130 aaKnown RBP32.12■■■□□ 2.73
PTDSS1-201ENST00000337004 CENPBP07199 599 aaPredicted RBP32.11■■■□□ 2.73
PTDSS1-201ENST00000337004 ERICH3Q5RHP9 1530 aa32.11■■■□□ 2.73
PTDSS1-201ENST00000337004 PRXQ9BXM0 1461 aa32.1■■■□□ 2.73
PTDSS1-201ENST00000337004 NEUROD1Q13562 356 aa32.09■■■□□ 2.73
PTDSS1-201ENST00000337004 CUX1P39880 1505 aa31.97■■■□□ 2.71
PTDSS1-201ENST00000337004 KIF27Q86VH2 1401 aa31.97■■■□□ 2.71
PTDSS1-201ENST00000337004 CFTRP13569 1480 aa31.94■■■□□ 2.7
PTDSS1-201ENST00000337004 ARAP1Q96P48 1450 aa31.91■■■□□ 2.7
PTDSS1-201ENST00000337004 GTF3C3Q9Y5Q9 886 aa31.8■■■□□ 2.68
PTDSS1-201ENST00000337004 CLSPNQ9HAW4 1339 aa31.8■■■□□ 2.68
PTDSS1-201ENST00000337004 KANK4Q5T7N3 995 aaPredicted RBP31.76■■■□□ 2.67
PTDSS1-201ENST00000337004 RRBP1Q9P2E9 1410 aaKnown RBP31.66■■■□□ 2.66
PTDSS1-201ENST00000337004 MIER1Q8N108 512 aa31.66■■■□□ 2.66
PTDSS1-201ENST00000337004 DHX57Q6P158 1386 aaKnown RBP31.66■■■□□ 2.66
PTDSS1-201ENST00000337004 ARHGAP35Q9NRY4 1499 aa31.64■■■□□ 2.66
PTDSS1-201ENST00000337004 IGF1RP08069 1367 aa31.58■■■□□ 2.65
PTDSS1-201ENST00000337004 CADPSQ9ULU8 1353 aa31.58■■■□□ 2.65
PTDSS1-201ENST00000337004 CUX2O14529 1486 aa31.57■■■□□ 2.65
PTDSS1-201ENST00000337004 YTHDC1Q96MU7 727 aaKnown RBP31.56■■■□□ 2.64
PTDSS1-201ENST00000337004 PRDM2Q13029 1718 aa31.53■■■□□ 2.64
PTDSS1-201ENST00000337004 CCNB3Q8WWL7 1395 aa31.53■■■□□ 2.64
PTDSS1-201ENST00000337004 CARMIL1Q5VZK9 1371 aa31.46■■■□□ 2.63
PTDSS1-201ENST00000337004 FGD5Q6ZNL6 1462 aa31.41■■■□□ 2.62
PTDSS1-201ENST00000337004 MAP3K1Q13233 1512 aa31.4■■■□□ 2.62
PTDSS1-201ENST00000337004 ITGAEP38570 1179 aa31.31■■■□□ 2.6
PTDSS1-201ENST00000337004 TIAM1Q13009 1591 aa31.31■■■□□ 2.6
PTDSS1-201ENST00000337004 FHAD1B1AJZ9 1412 aa31.26■■■□□ 2.59
PTDSS1-201ENST00000337004 LRRC9Q6ZRR7 1453 aa31.23■■■□□ 2.59
PTDSS1-201ENST00000337004 FANCD2Q9BXW9 1451 aa31.23■■■□□ 2.59
PTDSS1-201ENST00000337004 RAB3GAP2Q9H2M9 1393 aa31.21■■■□□ 2.59
PTDSS1-201ENST00000337004 CC2D2AQ9P2K1 1620 aa31.18■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms