RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 FREM2Q5SZK8 3169 aa7.37□□□□□ -1.23
FN1-201ENST00000323926 BRCA2P51587 3418 aa7.37□□□□□ -1.23
FN1-201ENST00000323926 ADM2Q7Z4H4 148 aa7.35□□□□□ -1.23
FN1-201ENST00000323926 KRTAP10-1P60331 282 aa7.35□□□□□ -1.23
FN1-201ENST00000323926 CELSR1Q9NYQ6 3014 aa7.35□□□□□ -1.23
FN1-201ENST00000323926 TENM4Q6N022 2769 aa7.34□□□□□ -1.23
FN1-201ENST00000323926 FBN2P35556 2912 aa7.33□□□□□ -1.24
FN1-201ENST00000323926 DMXL1Q9Y485 3027 aa7.33□□□□□ -1.24
FN1-201ENST00000323926 DNAH14Q0VDD8 3507 aa7.32□□□□□ -1.24
FN1-201ENST00000323926 CDH23Q9H251 3354 aa7.31□□□□□ -1.24
FN1-201ENST00000323926 TGP01266 2768 aa7.28□□□□□ -1.24
FN1-201ENST00000323926 H3BS24 57 aa7.28□□□□□ -1.24
FN1-201ENST00000323926 HRNRQ86YZ3 2850 aaPredicted RBP7.27□□□□□ -1.25
FN1-201ENST00000323926 MXRA5Q9NR99 2828 aa7.26□□□□□ -1.25
FN1-201ENST00000323926 KRTAP10-2P60368 255 aa7.26□□□□□ -1.25
FN1-201ENST00000323926 PP632Q6XCG6 107 aa7.26□□□□□ -1.25
FN1-201ENST00000323926 ATMQ13315 3056 aa7.26□□□□□ -1.25
FN1-201ENST00000323926 NOTCH2NLQ7Z3S9 236 aa7.25□□□□□ -1.25
FN1-201ENST00000323926 A8MUU9 505 aa7.23□□□□□ -1.25
FN1-201ENST00000323926 CYSTM1Q9H1C7 97 aa7.23□□□□□ -1.25
FN1-201ENST00000323926 VCANP13611 3396 aa7.2□□□□□ -1.26
FN1-201ENST00000323926 KRTAP16-1A8MUX0 517 aa7.2□□□□□ -1.26
FN1-201ENST00000323926 PRAC1Q96KF2 57 aa7.19□□□□□ -1.26
FN1-201ENST00000323926 Q6ZRN7 208 aaPredicted RBP7.18□□□□□ -1.26
FN1-201ENST00000323926 TNP1P09430 55 aa7.17□□□□□ -1.26
FN1-201ENST00000323926 KRTAP25-1Q3LHN0 102 aa7.17□□□□□ -1.26
FN1-201ENST00000323926 KRTAP13-1Q8IUC0 172 aa7.15□□□□□ -1.26
FN1-201ENST00000323926 TENM2Q9NT68 2774 aa7.11□□□□□ -1.27
FN1-201ENST00000323926 C20orf166-AS1Q96NR2 134 aa7.11□□□□□ -1.27
FN1-201ENST00000323926 PKD1L1Q8TDX9 2849 aa7.11□□□□□ -1.27
FN1-201ENST00000323926 CFAP47Q6ZTR5 3102 aa7.1□□□□□ -1.27
FN1-201ENST00000323926 A6NN06 94 aa7.08□□□□□ -1.28
FN1-201ENST00000323926 VWFP04275 2813 aa7.07□□□□□ -1.28
FN1-201ENST00000323926 SPEGQ15772 3267 aa7.06□□□□□ -1.28
FN1-201ENST00000323926 EYSQ5T1H1 3165 aa7.05□□□□□ -1.28
FN1-201ENST00000323926 SPTBN5Q9NRC6 3674 aaKnown RBP7.02□□□□□ -1.28
FN1-201ENST00000323926 SZT2Q5T011 3432 aa7.01□□□□□ -1.29
FN1-201ENST00000323926 PRO2289Q9P1D8 64 aa6.97□□□□□ -1.29
FN1-201ENST00000323926 NBPF19A0A087WUL8 3843 aa6.97□□□□□ -1.29
FN1-201ENST00000323926 KRTAP13-2Q52LG2 175 aa6.96□□□□□ -1.3
FN1-201ENST00000323926 COL7A1Q02388 2944 aa6.95□□□□□ -1.3
FN1-201ENST00000323926 TPRXLQ17RH7 258 aa6.94□□□□□ -1.3
FN1-201ENST00000323926 KRTAP11-1Q8IUC1 163 aa6.89□□□□□ -1.31
FN1-201ENST00000323926 KRTAP7-1Q8IUC3 87 aa6.84□□□□□ -1.32
FN1-201ENST00000323926 LOC400499M0QZD8 3231 aa6.83□□□□□ -1.32
FN1-201ENST00000323926 SRRM2Q9UQ35 2752 aaKnown RBP6.79□□□□□ -1.32
FN1-201ENST00000323926 WDFY3Q8IZQ1 3526 aa6.79□□□□□ -1.32
FN1-201ENST00000323926 A8MU10 97 aa6.77□□□□□ -1.33
FN1-201ENST00000323926 NDUFAF8A1L188 74 aa6.76□□□□□ -1.33
FN1-201ENST00000323926 XP32Q5T750 250 aa6.75□□□□□ -1.33
FN1-201ENST00000323926 MYO15AQ9UKN7 3530 aa6.74□□□□□ -1.33
FN1-201ENST00000323926 ZFHX3Q15911 3703 aa6.74□□□□□ -1.33
FN1-201ENST00000323926 C10orf95Q9H7T3 257 aa6.74□□□□□ -1.33
FN1-201ENST00000323926 MEGF8Q7Z7M0 2845 aa6.68□□□□□ -1.34
FN1-201ENST00000323926 KRTAP1-4P0C5Y4 121 aa6.67□□□□□ -1.34
FN1-201ENST00000323926 KRTAP10-8P60410 259 aa6.66□□□□□ -1.34
FN1-201ENST00000323926 P0C880 135 aa6.64□□□□□ -1.35
FN1-201ENST00000323926 ASPMQ8IZT6 3477 aa6.62□□□□□ -1.35
FN1-201ENST00000323926 FBN1P35555 2871 aaKnown RBP6.61□□□□□ -1.35
FN1-201ENST00000323926 LAMA5O15230 3695 aa6.61□□□□□ -1.35
FN1-201ENST00000323926 H0YAA0 97 aa6.6□□□□□ -1.35
FN1-201ENST00000323926 ZFHX4Q86UP3 3567 aa6.57□□□□□ -1.36
FN1-201ENST00000323926 SPENQ96T58 3664 aaKnown RBP6.57□□□□□ -1.36
FN1-201ENST00000323926 KRTAP13-3Q3SY46 172 aa6.56□□□□□ -1.36
FN1-201ENST00000323926 FBN3Q75N90 2809 aa6.53□□□□□ -1.36
FN1-201ENST00000323926 KRTAP10-10P60014 251 aa6.49□□□□□ -1.37
FN1-201ENST00000323926 RELNP78509 3460 aa6.45□□□□□ -1.38
FN1-201ENST00000323926 DCHS1Q96JQ0 3298 aa6.41□□□□□ -1.38
FN1-201ENST00000323926 DMDP11532 3685 aa6.39□□□□□ -1.39
FN1-201ENST00000323926 TRRAPQ9Y4A5 3859 aa6.38□□□□□ -1.39
FN1-201ENST00000323926 KRTAP13-4Q3LI77 160 aa6.37□□□□□ -1.39
FN1-201ENST00000323926 SMG1Q96Q15 3661 aaKnown RBP6.33□□□□□ -1.4
FN1-201ENST00000323926 AKAP9Q99996 3911 aa6.32□□□□□ -1.4
FN1-201ENST00000323926 OTOGQ6ZRI0 2925 aa6.3□□□□□ -1.4
FN1-201ENST00000323926 VPS13CQ709C8 3753 aa6.3□□□□□ -1.4
FN1-201ENST00000323926 A0A1B0GVY2 172 aa6.27□□□□□ -1.41
FN1-201ENST00000323926 CSMD1Q96PZ7 3565 aa6.2□□□□□ -1.42
FN1-201ENST00000323926 BSNQ9UPA5 3926 aa6.15□□□□□ -1.42
FN1-201ENST00000323926 KRTAP12-1P59990 96 aa6.1□□□□□ -1.43
FN1-201ENST00000323926 KRTAP12-2P59991 146 aa6.1□□□□□ -1.43
FN1-201ENST00000323926 INE1O15225 51 aa6.1□□□□□ -1.43
FN1-201ENST00000323926 KRTAP23-1A1A580 65 aa6.05□□□□□ -1.44
FN1-201ENST00000323926 MUC3AQ02505 3323 aa6.01□□□□□ -1.45
FN1-201ENST00000323926 KRTAP15-1Q3LI76 137 aa5.96□□□□□ -1.46
FN1-201ENST00000323926 SVEP1Q4LDE5 3571 aa5.94□□□□□ -1.46
FN1-201ENST00000323926 CUBNO60494 3623 aa5.85□□□□□ -1.47
FN1-201ENST00000323926 CSMD2Q7Z408 3487 aa5.81□□□□□ -1.48
FN1-201ENST00000323926 KRTAP3-1Q9BYR8 98 aa5.8□□□□□ -1.48
FN1-201ENST00000323926 KRTAP10-6P60371 365 aaPredicted RBP5.8□□□□□ -1.48
FN1-201ENST00000323926 KRTAP10-12P60413 245 aa5.79□□□□□ -1.48
FN1-201ENST00000323926 CMYA5Q8N3K9 4069 aa5.77□□□□□ -1.49
FN1-201ENST00000323926 ALMS1Q8TCU4 4167 aa5.77□□□□□ -1.49
FN1-201ENST00000323926 CSMD3Q7Z407 3707 aa5.76□□□□□ -1.49
FN1-201ENST00000323926 ZNF469Q96JG9 3925 aaPredicted RBP5.76□□□□□ -1.49
FN1-201ENST00000323926 LYSTQ99698 3801 aa5.74□□□□□ -1.49
FN1-201ENST00000323926 DNAH7Q8WXX0 4024 aa5.73□□□□□ -1.49
FN1-201ENST00000323926 DNAH1Q9P2D7 4330 aa5.67□□□□□ -1.5
FN1-201ENST00000323926 DNAH3Q8TD57 4116 aa5.61□□□□□ -1.51
FN1-201ENST00000323926 MT1HL1P0DM35 61 aa5.59□□□□□ -1.52
FN1-201ENST00000323926 HECTD4Q9Y4D8 3996 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms