RNA–Protein interactions for RNA: ENST00000302538.9

ABR-202, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABR, Length 5,289 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-202ENST00000302538 M0QZ58 72 aa7.66□□□□□ -1.18
ABR-202ENST00000302538 DCHS2Q6V1P9 2916 aa7.61□□□□□ -1.19
ABR-202ENST00000302538 Q6ZRN7 208 aaPredicted RBP7.6□□□□□ -1.19
ABR-202ENST00000302538 MYO15AQ9UKN7 3530 aa7.58□□□□□ -1.2
ABR-202ENST00000302538 NF1P21359 2839 aa7.57□□□□□ -1.2
ABR-202ENST00000302538 Q75L30 129 aa7.56□□□□□ -1.2
ABR-202ENST00000302538 ASH1LQ9NR48 2969 aaKnown RBP7.55□□□□□ -1.2
ABR-202ENST00000302538 ADM2Q7Z4H4 148 aa7.55□□□□□ -1.2
ABR-202ENST00000302538 KRTAP4-16G5E9R7 235 aaPredicted RBP7.53□□□□□ -1.2
ABR-202ENST00000302538 LINC01558Q9Y6Z2 57 aa7.51□□□□□ -1.21
ABR-202ENST00000302538 FBN2P35556 2912 aa7.5□□□□□ -1.21
ABR-202ENST00000302538 RPS29P62273 56 aaKnown RBP7.49□□□□□ -1.21
ABR-202ENST00000302538 Q5VV11 94 aa7.49□□□□□ -1.21
ABR-202ENST00000302538 A0A0A0MQY5 61 aa7.48□□□□□ -1.21
ABR-202ENST00000302538 KRTAP11-1Q8IUC1 163 aa7.48□□□□□ -1.21
ABR-202ENST00000302538 H1FX-AS1Q4G0G2 97 aa7.47□□□□□ -1.21
ABR-202ENST00000302538 RPL37P61927 97 aaKnown RBP7.47□□□□□ -1.21
ABR-202ENST00000302538 PRAC1Q96KF2 57 aa7.47□□□□□ -1.21
ABR-202ENST00000302538 MXRA5Q9NR99 2828 aa7.47□□□□□ -1.21
ABR-202ENST00000302538 MUC3AQ02505 3323 aa7.45□□□□□ -1.22
ABR-202ENST00000302538 C20orf166-AS1Q96NR2 134 aa7.44□□□□□ -1.22
ABR-202ENST00000302538 ASB16-AS1Q495Z4 193 aa7.42□□□□□ -1.22
ABR-202ENST00000302538 RELNP78509 3460 aa7.42□□□□□ -1.22
ABR-202ENST00000302538 KRTAP13-2Q52LG2 175 aa7.42□□□□□ -1.22
ABR-202ENST00000302538 DCHS1Q96JQ0 3298 aa7.41□□□□□ -1.22
ABR-202ENST00000302538 PDZD2O15018 2839 aa7.4□□□□□ -1.22
ABR-202ENST00000302538 NOTCH2NLQ7Z3S9 236 aa7.39□□□□□ -1.23
ABR-202ENST00000302538 KRTAP7-1Q8IUC3 87 aa7.35□□□□□ -1.23
ABR-202ENST00000302538 SPATA8Q6RVD6 105 aa7.35□□□□□ -1.23
ABR-202ENST00000302538 A8MUU9 505 aa7.34□□□□□ -1.24
ABR-202ENST00000302538 KRTAP16-1A8MUX0 517 aa7.34□□□□□ -1.24
ABR-202ENST00000302538 ROMO1P60602 79 aa7.33□□□□□ -1.24
ABR-202ENST00000302538 KRTAP29-1A8MX34 341 aaPredicted RBP7.32□□□□□ -1.24
ABR-202ENST00000302538 LAMA5O15230 3695 aa7.29□□□□□ -1.24
ABR-202ENST00000302538 KRTAP13-1Q8IUC0 172 aa7.28□□□□□ -1.24
ABR-202ENST00000302538 OTOGQ6ZRI0 2925 aa7.26□□□□□ -1.25
ABR-202ENST00000302538 DMDP11532 3685 aa7.22□□□□□ -1.25
ABR-202ENST00000302538 CELSR1Q9NYQ6 3014 aa7.22□□□□□ -1.25
ABR-202ENST00000302538 TENM1Q9UKZ4 2725 aa7.22□□□□□ -1.25
ABR-202ENST00000302538 TENM2Q9NT68 2774 aa7.22□□□□□ -1.25
ABR-202ENST00000302538 TENM3Q9P273 2699 aa7.2□□□□□ -1.26
ABR-202ENST00000302538 ASPMQ8IZT6 3477 aa7.16□□□□□ -1.26
ABR-202ENST00000302538 A6NN06 94 aa7.15□□□□□ -1.26
ABR-202ENST00000302538 WDFY3Q8IZQ1 3526 aa7.15□□□□□ -1.26
ABR-202ENST00000302538 A0A1B0GVY2 172 aa7.13□□□□□ -1.27
ABR-202ENST00000302538 NBPF19A0A087WUL8 3843 aa7.1□□□□□ -1.27
ABR-202ENST00000302538 XP32Q5T750 250 aa7.1□□□□□ -1.27
ABR-202ENST00000302538 PKD1L1Q8TDX9 2849 aa7.1□□□□□ -1.27
ABR-202ENST00000302538 A8MU10 97 aa7.08□□□□□ -1.28
ABR-202ENST00000302538 KRTAP1-4P0C5Y4 121 aa7.06□□□□□ -1.28
ABR-202ENST00000302538 TNP1P09430 55 aa7.05□□□□□ -1.28
ABR-202ENST00000302538 TPRXLQ17RH7 258 aa7.03□□□□□ -1.28
ABR-202ENST00000302538 FBN1P35555 2871 aaKnown RBP7.02□□□□□ -1.29
ABR-202ENST00000302538 KRTAP10-8P60410 259 aa7.02□□□□□ -1.29
ABR-202ENST00000302538 ZFHX3Q15911 3703 aa7.01□□□□□ -1.29
ABR-202ENST00000302538 KRTAP10-10P60014 251 aa7.01□□□□□ -1.29
ABR-202ENST00000302538 ZFHX4Q86UP3 3567 aa7□□□□□ -1.29
ABR-202ENST00000302538 SMG1Q96Q15 3661 aaKnown RBP7□□□□□ -1.29
ABR-202ENST00000302538 VWFP04275 2813 aa6.99□□□□□ -1.29
ABR-202ENST00000302538 TGP01266 2768 aa6.95□□□□□ -1.3
ABR-202ENST00000302538 KRTAP25-1Q3LHN0 102 aa6.94□□□□□ -1.3
ABR-202ENST00000302538 NDUFAF8A1L188 74 aa6.94□□□□□ -1.3
ABR-202ENST00000302538 ANK3Q12955 4377 aaKnown RBP6.9□□□□□ -1.31
ABR-202ENST00000302538 KRTAP13-3Q3SY46 172 aa6.85□□□□□ -1.31
ABR-202ENST00000302538 PRO2289Q9P1D8 64 aa6.84□□□□□ -1.31
ABR-202ENST00000302538 CSMD1Q96PZ7 3565 aa6.81□□□□□ -1.32
ABR-202ENST00000302538 CSMD2Q7Z408 3487 aa6.79□□□□□ -1.32
ABR-202ENST00000302538 C10orf95Q9H7T3 257 aa6.77□□□□□ -1.33
ABR-202ENST00000302538 SPENQ96T58 3664 aaKnown RBP6.76□□□□□ -1.33
ABR-202ENST00000302538 BSNQ9UPA5 3926 aa6.73□□□□□ -1.33
ABR-202ENST00000302538 FBN3Q75N90 2809 aa6.69□□□□□ -1.34
ABR-202ENST00000302538 PP632Q6XCG6 107 aa6.67□□□□□ -1.34
ABR-202ENST00000302538 TRRAPQ9Y4A5 3859 aa6.64□□□□□ -1.35
ABR-202ENST00000302538 SVEP1Q4LDE5 3571 aa6.62□□□□□ -1.35
ABR-202ENST00000302538 SRRM2Q9UQ35 2752 aaKnown RBP6.56□□□□□ -1.36
ABR-202ENST00000302538 P0C880 135 aa6.56□□□□□ -1.36
ABR-202ENST00000302538 H0YAA0 97 aa6.48□□□□□ -1.37
ABR-202ENST00000302538 MEGF8Q7Z7M0 2845 aa6.46□□□□□ -1.38
ABR-202ENST00000302538 COL7A1Q02388 2944 aa6.43□□□□□ -1.38
ABR-202ENST00000302538 CUBNO60494 3623 aa6.4□□□□□ -1.38
ABR-202ENST00000302538 HUWE1Q7Z6Z7 4374 aaKnown RBP6.35□□□□□ -1.39
ABR-202ENST00000302538 MT1HL1P0DM35 61 aa6.32□□□□□ -1.4
ABR-202ENST00000302538 ZNF469Q96JG9 3925 aaPredicted RBP6.27□□□□□ -1.41
ABR-202ENST00000302538 AKAP9Q99996 3911 aa6.27□□□□□ -1.41
ABR-202ENST00000302538 KRTAP10-4P60372 401 aaPredicted RBP6.26□□□□□ -1.41
ABR-202ENST00000302538 KRTAP4-5Q9BYR2 181 aa6.24□□□□□ -1.41
ABR-202ENST00000302538 ALMS1Q8TCU4 4167 aa6.22□□□□□ -1.41
ABR-202ENST00000302538 KRTAP12-2P59991 146 aa6.21□□□□□ -1.42
ABR-202ENST00000302538 VPS13CQ709C8 3753 aa6.2□□□□□ -1.42
ABR-202ENST00000302538 DNAH9Q9NYC9 4486 aa6.19□□□□□ -1.42
ABR-202ENST00000302538 KRTAP13-4Q3LI77 160 aa6.16□□□□□ -1.42
ABR-202ENST00000302538 DNHD1Q96M86 4753 aa6.16□□□□□ -1.42
ABR-202ENST00000302538 KRTAP3-1Q9BYR8 98 aa6.09□□□□□ -1.43
ABR-202ENST00000302538 KRTAP12-1P59990 96 aa6.08□□□□□ -1.44
ABR-202ENST00000302538 KRTAP15-1Q3LI76 137 aa6.06□□□□□ -1.44
ABR-202ENST00000302538 DNAH5Q8TE73 4624 aa5.96□□□□□ -1.46
ABR-202ENST00000302538 PLECQ15149 4684 aaKnown RBP5.93□□□□□ -1.46
ABR-202ENST00000302538 CRCT1Q9UGL9 99 aa5.92□□□□□ -1.46
ABR-202ENST00000302538 DNAH11Q96DT5 4516 aa5.89□□□□□ -1.47
ABR-202ENST00000302538 DNAH1Q9P2D7 4330 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms