RNA–Protein interactions for RNA: ENST00000289577.9

TMED4-201, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2 BASIC

Gene TMED4, Length 2,203 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-201ENST00000289577 SPAG11AQ6PDA7 123 aa12.1□□□□□ -0.47
TMED4-201ENST00000289577 DNAH8Q96JB1 4490 aa12.1□□□□□ -0.47
TMED4-201ENST00000289577 A0A087WTM6 91 aa12.07□□□□□ -0.48
TMED4-201ENST00000289577 CDC42SE1Q9NRR8 79 aa12.07□□□□□ -0.48
TMED4-201ENST00000289577 ANAPC11Q9NYG5 84 aa12.07□□□□□ -0.48
TMED4-201ENST00000289577 NUPR2A6NF83 97 aa12.07□□□□□ -0.48
TMED4-201ENST00000289577 ZNF861PO60384 105 aa12.07□□□□□ -0.48
TMED4-201ENST00000289577 VPS13DQ5THJ4 4388 aa12.05□□□□□ -0.48
TMED4-201ENST00000289577 SPTSSBQ8NFR3 76 aa12.05□□□□□ -0.48
TMED4-201ENST00000289577 KRTAP13-3Q3SY46 172 aa12.03□□□□□ -0.48
TMED4-201ENST00000289577 HECTD4Q9Y4D8 3996 aa12.03□□□□□ -0.48
TMED4-201ENST00000289577 FRAS1Q86XX4 4008 aa12.01□□□□□ -0.49
TMED4-201ENST00000289577 RTL8CO15255 209 aa12.01□□□□□ -0.49
TMED4-201ENST00000289577 KTN1-AS1Q86SY8 53 aa12.01□□□□□ -0.49
TMED4-201ENST00000289577 Q5W150 140 aa12□□□□□ -0.49
TMED4-201ENST00000289577 A6NN06 94 aa11.99□□□□□ -0.49
TMED4-201ENST00000289577 DNAH17Q9UFH2 4485 aa11.97□□□□□ -0.49
TMED4-201ENST00000289577 SPINK7P58062 85 aa11.94□□□□□ -0.5
TMED4-201ENST00000289577 SPINK6Q6UWN8 80 aa11.93□□□□□ -0.5
TMED4-201ENST00000289577 STARD9Q9P2P6 4700 aa11.92□□□□□ -0.5
TMED4-201ENST00000289577 PRR26Q8N8Z3 221 aa11.9□□□□□ -0.51
TMED4-201ENST00000289577 ALMS1Q8TCU4 4167 aa11.89□□□□□ -0.51
TMED4-201ENST00000289577 IGLV7-43P04211 117 aa11.88□□□□□ -0.51
TMED4-201ENST00000289577 C8orf87E5RJ46 101 aa11.88□□□□□ -0.51
TMED4-201ENST00000289577 PRKDCP78527 4128 aaKnown RBP11.87□□□□□ -0.51
TMED4-201ENST00000289577 DNAH2Q9P225 4427 aa11.86□□□□□ -0.51
TMED4-201ENST00000289577 CIRBP-AS1Q8TBR5 109 aa11.86□□□□□ -0.51
TMED4-201ENST00000289577 ACYP2P14621 99 aa11.86□□□□□ -0.51
TMED4-201ENST00000289577 SSBP3-AS1Q7Z2R9 100 aa11.83□□□□□ -0.52
TMED4-201ENST00000289577 DMAC1Q96GE9 116 aa11.82□□□□□ -0.52
TMED4-201ENST00000289577 KMT2AQ03164 3969 aa11.79□□□□□ -0.52
TMED4-201ENST00000289577 RBM12B-AS1Q9P1G2 102 aa11.78□□□□□ -0.52
TMED4-201ENST00000289577 C7orf65Q6ZTY9 151 aa11.77□□□□□ -0.53
TMED4-201ENST00000289577 FAM229AH3BQW9 127 aa11.75□□□□□ -0.53
TMED4-201ENST00000289577 LINC00313P59037 77 aa11.75□□□□□ -0.53
TMED4-201ENST00000289577 FBN3Q75N90 2809 aa11.71□□□□□ -0.53
TMED4-201ENST00000289577 IGKV2-30P06310 120 aa11.71□□□□□ -0.54
TMED4-201ENST00000289577 C1orf134Q5TEV5 83 aa11.7□□□□□ -0.54
TMED4-201ENST00000289577 DNAH11Q96DT5 4516 aa11.69□□□□□ -0.54
TMED4-201ENST00000289577 KRTAP16-1A8MUX0 517 aa11.64□□□□□ -0.55
TMED4-201ENST00000289577 KRTAP13-2Q52LG2 175 aa11.64□□□□□ -0.55
TMED4-201ENST00000289577 RETNLBQ9BQ08 111 aa11.64□□□□□ -0.55
TMED4-201ENST00000289577 DNAH5Q8TE73 4624 aa11.6□□□□□ -0.55
TMED4-201ENST00000289577 A0A1B0GU69 56 aa11.6□□□□□ -0.55
TMED4-201ENST00000289577 MEGF8Q7Z7M0 2845 aa11.6□□□□□ -0.55
TMED4-201ENST00000289577 DNAH6Q9C0G6 4158 aa11.59□□□□□ -0.55
TMED4-201ENST00000289577 SPATA8Q6RVD6 105 aa11.56□□□□□ -0.56
TMED4-201ENST00000289577 TGP01266 2768 aa11.53□□□□□ -0.56
TMED4-201ENST00000289577 KRTAP10-2P60368 255 aa11.53□□□□□ -0.56
TMED4-201ENST00000289577 IGKV2D-30A0A075B6S6 120 aa11.47□□□□□ -0.57
TMED4-201ENST00000289577 KRTAP1-4P0C5Y4 121 aa11.47□□□□□ -0.57
TMED4-201ENST00000289577 Q6ZSA8 131 aa11.47□□□□□ -0.57
TMED4-201ENST00000289577 LY6G6CO95867 125 aa11.45□□□□□ -0.58
TMED4-201ENST00000289577 PLA2G1BP04054 148 aaKnown RBP11.45□□□□□ -0.58
TMED4-201ENST00000289577 LRP1BQ9NZR2 4599 aa11.45□□□□□ -0.58
TMED4-201ENST00000289577 UQCR11O14957 56 aa11.44□□□□□ -0.58
TMED4-201ENST00000289577 MIR22HGQ0VDD5 57 aa11.44□□□□□ -0.58
TMED4-201ENST00000289577 KRTAP10-1P60331 282 aa11.4□□□□□ -0.58
TMED4-201ENST00000289577 PRAC1Q96KF2 57 aa11.39□□□□□ -0.59
TMED4-201ENST00000289577 ADM2Q7Z4H4 148 aa11.36□□□□□ -0.59
TMED4-201ENST00000289577 PKD1P98161 4303 aa11.35□□□□□ -0.59
TMED4-201ENST00000289577 C4orf48Q5BLP8 95 aa11.32□□□□□ -0.6
TMED4-201ENST00000289577 SPINK1P00995 79 aa11.31□□□□□ -0.6
TMED4-201ENST00000289577 VPS13BQ7Z7G8 4022 aa11.31□□□□□ -0.6
TMED4-201ENST00000289577 FAT2Q9NYQ8 4349 aa11.28□□□□□ -0.6
TMED4-201ENST00000289577 TYMSOSQ8TAI1 123 aa11.28□□□□□ -0.6
TMED4-201ENST00000289577 Q8N1X5 172 aa11.22□□□□□ -0.61
TMED4-201ENST00000289577 RPS29P62273 56 aaKnown RBP11.17□□□□□ -0.62
TMED4-201ENST00000289577 HYDINQ4G0P3 5121 aa11.15□□□□□ -0.62
TMED4-201ENST00000289577 LINC01554Q52M75 96 aa11.14□□□□□ -0.63
TMED4-201ENST00000289577 LINC00304Q8N9R0 145 aa11.13□□□□□ -0.63
TMED4-201ENST00000289577 SACSQ9NZJ4 4579 aa11.13□□□□□ -0.63
TMED4-201ENST00000289577 DNHD1Q96M86 4753 aa11.06□□□□□ -0.64
TMED4-201ENST00000289577 CSAG1Q6PB30 78 aa11.04□□□□□ -0.64
TMED4-201ENST00000289577 A8MUU9 505 aa11.04□□□□□ -0.64
TMED4-201ENST00000289577 C20orf166-AS1Q96NR2 134 aa11.04□□□□□ -0.64
TMED4-201ENST00000289577 H0YAA0 97 aa11.03□□□□□ -0.64
TMED4-201ENST00000289577 KRTAP3-1Q9BYR8 98 aa11.01□□□□□ -0.65
TMED4-201ENST00000289577 PKHD1L1Q86WI1 4243 aa10.95□□□□□ -0.66
TMED4-201ENST00000289577 C9orf92A6NGG3 77 aa10.94□□□□□ -0.66
TMED4-201ENST00000289577 A0A1B0GU33 70 aa10.92□□□□□ -0.66
TMED4-201ENST00000289577 PKHD1P08F94 4074 aa10.89□□□□□ -0.67
TMED4-201ENST00000289577 H1FX-AS1Q4G0G2 97 aa10.89□□□□□ -0.67
TMED4-201ENST00000289577 APOBP04114 4563 aaKnown RBP10.82□□□□□ -0.68
TMED4-201ENST00000289577 SMR3BP02814 79 aaPredicted RBP10.8□□□□□ -0.68
TMED4-201ENST00000289577 DYNC1H1Q14204 4646 aaKnown RBP10.8□□□□□ -0.68
TMED4-201ENST00000289577 KRTAP10-4P60372 401 aaPredicted RBP10.77□□□□□ -0.68
TMED4-201ENST00000289577 COX6B2Q6YFQ2 88 aa10.76□□□□□ -0.69
TMED4-201ENST00000289577 KRTAP25-1Q3LHN0 102 aa10.75□□□□□ -0.69
TMED4-201ENST00000289577 FAT1Q14517 4588 aa10.72□□□□□ -0.69
TMED4-201ENST00000289577 A0A1B0GVY2 172 aa10.62□□□□□ -0.71
TMED4-201ENST00000289577 K7ERS5 55 aa10.61□□□□□ -0.71
TMED4-201ENST00000289577 FLG2Q5D862 2391 aaPredicted RBP10.55□□□□□ -0.72
TMED4-201ENST00000289577 KRTAP10-6P60371 365 aaPredicted RBP10.53□□□□□ -0.72
TMED4-201ENST00000289577 KRTAP3-3Q9BYR6 98 aa10.53□□□□□ -0.72
TMED4-201ENST00000289577 FAT3Q8TDW7 4589 aa10.52□□□□□ -0.73
TMED4-201ENST00000289577 ROMO1P60602 79 aa10.48□□□□□ -0.73
TMED4-201ENST00000289577 RPL37P61927 97 aaKnown RBP10.44□□□□□ -0.74
TMED4-201ENST00000289577 KRTAP3-2Q9BYR7 98 aa10.44□□□□□ -0.74
TMED4-201ENST00000289577 CRIPTQ9P021 101 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms