RNA–Protein interactions for RNA: ENST00000248420.9

CACTIN-202, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CACTIN, Length 2,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-202ENST00000248420 DNAH17Q9UFH2 4485 aa11.99□□□□□ -0.49
CACTIN-202ENST00000248420 DNAH2Q9P225 4427 aa11.98□□□□□ -0.49
CACTIN-202ENST00000248420 Q75L30 129 aa11.98□□□□□ -0.49
CACTIN-202ENST00000248420 HRES1P13985 223 aa11.97□□□□□ -0.49
CACTIN-202ENST00000248420 MRPL34Q9BQ48 92 aaKnown RBP11.97□□□□□ -0.49
CACTIN-202ENST00000248420 LOC101927531A0A1B0GV80 90 aa11.96□□□□□ -0.5
CACTIN-202ENST00000248420 LINC00483Q53H64 154 aa11.94□□□□□ -0.5
CACTIN-202ENST00000248420 Q5W150 140 aa11.93□□□□□ -0.5
CACTIN-202ENST00000248420 VPS13DQ5THJ4 4388 aa11.9□□□□□ -0.5
CACTIN-202ENST00000248420 PRR26Q8N8Z3 221 aa11.9□□□□□ -0.5
CACTIN-202ENST00000248420 MEGF8Q7Z7M0 2845 aa11.9□□□□□ -0.5
CACTIN-202ENST00000248420 SPINK7P58062 85 aa11.9□□□□□ -0.5
CACTIN-202ENST00000248420 IGLV5-52A0A0A0MRZ9 124 aa11.89□□□□□ -0.51
CACTIN-202ENST00000248420 FBN3Q75N90 2809 aa11.89□□□□□ -0.51
CACTIN-202ENST00000248420 A0A087WTM6 91 aa11.89□□□□□ -0.51
CACTIN-202ENST00000248420 LINC01558Q9Y6Z2 57 aa11.87□□□□□ -0.51
CACTIN-202ENST00000248420 RTL8CO15255 209 aa11.87□□□□□ -0.51
CACTIN-202ENST00000248420 CIRBP-AS1Q8TBR5 109 aa11.86□□□□□ -0.51
CACTIN-202ENST00000248420 ATP11AUNQ6ZP68 121 aa11.85□□□□□ -0.51
CACTIN-202ENST00000248420 ZNF861PO60384 105 aa11.85□□□□□ -0.51
CACTIN-202ENST00000248420 ZNF706Q9Y5V0 76 aaPredicted RBP11.85□□□□□ -0.51
CACTIN-202ENST00000248420 RETNLBQ9BQ08 111 aa11.84□□□□□ -0.51
CACTIN-202ENST00000248420 PRKDCP78527 4128 aaKnown RBP11.84□□□□□ -0.51
CACTIN-202ENST00000248420 DNAH6Q9C0G6 4158 aa11.83□□□□□ -0.52
CACTIN-202ENST00000248420 CDC42SE1Q9NRR8 79 aa11.83□□□□□ -0.52
CACTIN-202ENST00000248420 PLAC8Q9NZF1 115 aa11.83□□□□□ -0.52
CACTIN-202ENST00000248420 KTN1-AS1Q86SY8 53 aa11.8□□□□□ -0.52
CACTIN-202ENST00000248420 ALMS1Q8TCU4 4167 aa11.79□□□□□ -0.52
CACTIN-202ENST00000248420 NUPR2A6NF83 97 aa11.78□□□□□ -0.52
CACTIN-202ENST00000248420 A6NN06 94 aa11.78□□□□□ -0.52
CACTIN-202ENST00000248420 KRTAP13-3Q3SY46 172 aa11.73□□□□□ -0.53
CACTIN-202ENST00000248420 DNAH11Q96DT5 4516 aa11.73□□□□□ -0.53
CACTIN-202ENST00000248420 RBM12B-AS1Q9P1G2 102 aa11.7□□□□□ -0.54
CACTIN-202ENST00000248420 IGLV7-43P04211 117 aa11.68□□□□□ -0.54
CACTIN-202ENST00000248420 ACYP2P14621 99 aa11.63□□□□□ -0.55
CACTIN-202ENST00000248420 DNAH5Q8TE73 4624 aa11.61□□□□□ -0.55
CACTIN-202ENST00000248420 LINC00313P59037 77 aa11.6□□□□□ -0.55
CACTIN-202ENST00000248420 LRP1BQ9NZR2 4599 aa11.59□□□□□ -0.55
CACTIN-202ENST00000248420 C7orf65Q6ZTY9 151 aa11.56□□□□□ -0.56
CACTIN-202ENST00000248420 DMAC1Q96GE9 116 aa11.53□□□□□ -0.56
CACTIN-202ENST00000248420 C1orf134Q5TEV5 83 aa11.53□□□□□ -0.56
CACTIN-202ENST00000248420 C8orf87E5RJ46 101 aa11.51□□□□□ -0.57
CACTIN-202ENST00000248420 SSBP3-AS1Q7Z2R9 100 aa11.51□□□□□ -0.57
CACTIN-202ENST00000248420 KRTAP13-2Q52LG2 175 aa11.5□□□□□ -0.57
CACTIN-202ENST00000248420 KRTAP10-2P60368 255 aa11.5□□□□□ -0.57
CACTIN-202ENST00000248420 PRAC1Q96KF2 57 aa11.5□□□□□ -0.57
CACTIN-202ENST00000248420 A0A1B0GU69 56 aa11.49□□□□□ -0.57
CACTIN-202ENST00000248420 IGKV2D-30A0A075B6S6 120 aa11.49□□□□□ -0.57
CACTIN-202ENST00000248420 FAM229AH3BQW9 127 aa11.49□□□□□ -0.57
CACTIN-202ENST00000248420 LY6G6CO95867 125 aa11.49□□□□□ -0.57
CACTIN-202ENST00000248420 IGKV2-30P06310 120 aa11.49□□□□□ -0.57
CACTIN-202ENST00000248420 ADM2Q7Z4H4 148 aa11.47□□□□□ -0.57
CACTIN-202ENST00000248420 VPS13BQ7Z7G8 4022 aa11.43□□□□□ -0.58
CACTIN-202ENST00000248420 KRTAP16-1A8MUX0 517 aa11.39□□□□□ -0.59
CACTIN-202ENST00000248420 FAT2Q9NYQ8 4349 aa11.39□□□□□ -0.59
CACTIN-202ENST00000248420 DNHD1Q96M86 4753 aa11.38□□□□□ -0.59
CACTIN-202ENST00000248420 HYDINQ4G0P3 5121 aa11.37□□□□□ -0.59
CACTIN-202ENST00000248420 SPINK1P00995 79 aa11.34□□□□□ -0.59
CACTIN-202ENST00000248420 PKD1P98161 4303 aa11.33□□□□□ -0.6
CACTIN-202ENST00000248420 KRTAP10-1P60331 282 aa11.31□□□□□ -0.6
CACTIN-202ENST00000248420 MIR22HGQ0VDD5 57 aa11.31□□□□□ -0.6
CACTIN-202ENST00000248420 SPATA8Q6RVD6 105 aa11.29□□□□□ -0.6
CACTIN-202ENST00000248420 Q8N1X5 172 aa11.27□□□□□ -0.6
CACTIN-202ENST00000248420 KRTAP1-4P0C5Y4 121 aa11.27□□□□□ -0.61
CACTIN-202ENST00000248420 UQCR11O14957 56 aa11.26□□□□□ -0.61
CACTIN-202ENST00000248420 PLA2G1BP04054 148 aaKnown RBP11.22□□□□□ -0.61
CACTIN-202ENST00000248420 C4orf48Q5BLP8 95 aa11.19□□□□□ -0.62
CACTIN-202ENST00000248420 PKHD1P08F94 4074 aa11.17□□□□□ -0.62
CACTIN-202ENST00000248420 TYMSOSQ8TAI1 123 aa11.17□□□□□ -0.62
CACTIN-202ENST00000248420 Q6ZSA8 131 aa11.14□□□□□ -0.63
CACTIN-202ENST00000248420 C9orf92A6NGG3 77 aa11.04□□□□□ -0.64
CACTIN-202ENST00000248420 CSAG1Q6PB30 78 aa11.04□□□□□ -0.64
CACTIN-202ENST00000248420 LINC01554Q52M75 96 aa11.01□□□□□ -0.65
CACTIN-202ENST00000248420 FAT1Q14517 4588 aa11□□□□□ -0.65
CACTIN-202ENST00000248420 LINC00304Q8N9R0 145 aa10.96□□□□□ -0.65
CACTIN-202ENST00000248420 SMR3BP02814 79 aaPredicted RBP10.96□□□□□ -0.66
CACTIN-202ENST00000248420 H0YAA0 97 aa10.92□□□□□ -0.66
CACTIN-202ENST00000248420 FLG2Q5D862 2391 aaPredicted RBP10.92□□□□□ -0.66
CACTIN-202ENST00000248420 KRTAP3-1Q9BYR8 98 aa10.89□□□□□ -0.67
CACTIN-202ENST00000248420 SACSQ9NZJ4 4579 aa10.87□□□□□ -0.67
CACTIN-202ENST00000248420 DYNC1H1Q14204 4646 aaKnown RBP10.83□□□□□ -0.68
CACTIN-202ENST00000248420 A0A1B0GU33 70 aa10.79□□□□□ -0.68
CACTIN-202ENST00000248420 KRTAP21-3Q3LHN1 58 aa10.79□□□□□ -0.68
CACTIN-202ENST00000248420 A8MUU9 505 aa10.76□□□□□ -0.69
CACTIN-202ENST00000248420 C20orf166-AS1Q96NR2 134 aa10.73□□□□□ -0.69
CACTIN-202ENST00000248420 CRIPTQ9P021 101 aa10.72□□□□□ -0.69
CACTIN-202ENST00000248420 H1FX-AS1Q4G0G2 97 aa10.71□□□□□ -0.7
CACTIN-202ENST00000248420 PKHD1L1Q86WI1 4243 aa10.7□□□□□ -0.7
CACTIN-202ENST00000248420 RPS29P62273 56 aaKnown RBP10.68□□□□□ -0.7
CACTIN-202ENST00000248420 APOBP04114 4563 aaKnown RBP10.67□□□□□ -0.7
CACTIN-202ENST00000248420 DMBT1Q9UGM3 2413 aaPredicted RBP10.66□□□□□ -0.7
CACTIN-202ENST00000248420 LRP1Q07954 4544 aaKnown RBP10.6□□□□□ -0.71
CACTIN-202ENST00000248420 MYCBP2O75592 4640 aa10.59□□□□□ -0.71
CACTIN-202ENST00000248420 KRTAP25-1Q3LHN0 102 aa10.59□□□□□ -0.71
CACTIN-202ENST00000248420 COX6B2Q6YFQ2 88 aa10.58□□□□□ -0.72
CACTIN-202ENST00000248420 HSPG2P98160 4391 aa10.57□□□□□ -0.72
CACTIN-202ENST00000248420 KRTAP10-4P60372 401 aaPredicted RBP10.52□□□□□ -0.72
CACTIN-202ENST00000248420 H3BS24 57 aa10.48□□□□□ -0.73
CACTIN-202ENST00000248420 FAT3Q8TDW7 4589 aa10.48□□□□□ -0.73
CACTIN-202ENST00000248420 A0A0D9SG42 100 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms