RNA–Protein interactions for RNA: ENST00000245441.9

NIN-201, Transcript of ninein, humanhuman

APPRIS P5 TSL 5 BASIC

Gene NIN, Length 10,293 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-201ENST00000245441 KRTAP4-16G5E9R7 235 aaPredicted RBP6.85□□□□□ -1.31
NIN-201ENST00000245441 RPL37P61927 97 aaKnown RBP6.83□□□□□ -1.32
NIN-201ENST00000245441 ASB16-AS1Q495Z4 193 aa6.83□□□□□ -1.32
NIN-201ENST00000245441 H3BS24 57 aa6.83□□□□□ -1.32
NIN-201ENST00000245441 ROMO1P60602 79 aa6.81□□□□□ -1.32
NIN-201ENST00000245441 MXRA5Q9NR99 2828 aa6.81□□□□□ -1.32
NIN-201ENST00000245441 A0A0A0MQY5 61 aa6.81□□□□□ -1.32
NIN-201ENST00000245441 MYO15AQ9UKN7 3530 aa6.81□□□□□ -1.32
NIN-201ENST00000245441 SEC61BP60468 96 aaKnown RBP6.79□□□□□ -1.32
NIN-201ENST00000245441 KRTAP29-1A8MX34 341 aaPredicted RBP6.78□□□□□ -1.32
NIN-201ENST00000245441 H1FX-AS1Q4G0G2 97 aa6.78□□□□□ -1.32
NIN-201ENST00000245441 CELSR1Q9NYQ6 3014 aa6.76□□□□□ -1.33
NIN-201ENST00000245441 PKD1L1Q8TDX9 2849 aa6.73□□□□□ -1.33
NIN-201ENST00000245441 WDFY3Q8IZQ1 3526 aa6.73□□□□□ -1.33
NIN-201ENST00000245441 Q5VSD8 79 aa6.72□□□□□ -1.33
NIN-201ENST00000245441 LOC400499M0QZD8 3231 aa6.72□□□□□ -1.33
NIN-201ENST00000245441 KRTAP10-1P60331 282 aa6.72□□□□□ -1.33
NIN-201ENST00000245441 TGP01266 2768 aa6.72□□□□□ -1.33
NIN-201ENST00000245441 VWFP04275 2813 aa6.71□□□□□ -1.34
NIN-201ENST00000245441 KRTAP10-2P60368 255 aa6.7□□□□□ -1.34
NIN-201ENST00000245441 M0QZ58 72 aa6.7□□□□□ -1.34
NIN-201ENST00000245441 PANO1I0J062 215 aa6.7□□□□□ -1.34
NIN-201ENST00000245441 SPATA8Q6RVD6 105 aa6.67□□□□□ -1.34
NIN-201ENST00000245441 A0A087X002 238 aa6.66□□□□□ -1.34
NIN-201ENST00000245441 LCE6AA0A183 80 aa6.64□□□□□ -1.35
NIN-201ENST00000245441 ADM2Q7Z4H4 148 aa6.63□□□□□ -1.35
NIN-201ENST00000245441 RPS29P62273 56 aaKnown RBP6.63□□□□□ -1.35
NIN-201ENST00000245441 NOTCH2NLQ7Z3S9 236 aa6.59□□□□□ -1.35
NIN-201ENST00000245441 A6NN06 94 aa6.56□□□□□ -1.36
NIN-201ENST00000245441 PLAC4Q8WY50 150 aa6.54□□□□□ -1.36
NIN-201ENST00000245441 Q6ZRN7 208 aaPredicted RBP6.53□□□□□ -1.36
NIN-201ENST00000245441 KRTAP11-1Q8IUC1 163 aa6.53□□□□□ -1.36
NIN-201ENST00000245441 KRTAP25-1Q3LHN0 102 aa6.51□□□□□ -1.37
NIN-201ENST00000245441 SRRM2Q9UQ35 2752 aaKnown RBP6.51□□□□□ -1.37
NIN-201ENST00000245441 KRTAP13-1Q8IUC0 172 aa6.49□□□□□ -1.37
NIN-201ENST00000245441 KRTAP7-1Q8IUC3 87 aa6.48□□□□□ -1.37
NIN-201ENST00000245441 ASPMQ8IZT6 3477 aa6.46□□□□□ -1.37
NIN-201ENST00000245441 A8MUU9 505 aa6.45□□□□□ -1.38
NIN-201ENST00000245441 KRTAP16-1A8MUX0 517 aa6.45□□□□□ -1.38
NIN-201ENST00000245441 TENM2Q9NT68 2774 aa6.43□□□□□ -1.38
NIN-201ENST00000245441 FBN1P35555 2871 aaKnown RBP6.43□□□□□ -1.38
NIN-201ENST00000245441 LAMA5O15230 3695 aa6.43□□□□□ -1.38
NIN-201ENST00000245441 KRTAP13-2Q52LG2 175 aa6.43□□□□□ -1.38
NIN-201ENST00000245441 A8MU10 97 aa6.42□□□□□ -1.38
NIN-201ENST00000245441 NBPF19A0A087WUL8 3843 aa6.4□□□□□ -1.39
NIN-201ENST00000245441 DCHS1Q96JQ0 3298 aa6.38□□□□□ -1.39
NIN-201ENST00000245441 COL7A1Q02388 2944 aa6.37□□□□□ -1.39
NIN-201ENST00000245441 RELNP78509 3460 aa6.36□□□□□ -1.39
NIN-201ENST00000245441 ZFHX3Q15911 3703 aa6.35□□□□□ -1.39
NIN-201ENST00000245441 NDUFAF8A1L188 74 aa6.31□□□□□ -1.4
NIN-201ENST00000245441 C20orf166-AS1Q96NR2 134 aa6.3□□□□□ -1.4
NIN-201ENST00000245441 TNP1P09430 55 aa6.25□□□□□ -1.41
NIN-201ENST00000245441 ZFHX4Q86UP3 3567 aa6.24□□□□□ -1.41
NIN-201ENST00000245441 SMG1Q96Q15 3661 aaKnown RBP6.24□□□□□ -1.41
NIN-201ENST00000245441 SPENQ96T58 3664 aaKnown RBP6.22□□□□□ -1.41
NIN-201ENST00000245441 CSMD1Q96PZ7 3565 aa6.22□□□□□ -1.41
NIN-201ENST00000245441 DMDP11532 3685 aa6.2□□□□□ -1.42
NIN-201ENST00000245441 PP632Q6XCG6 107 aa6.2□□□□□ -1.42
NIN-201ENST00000245441 MEGF8Q7Z7M0 2845 aa6.17□□□□□ -1.42
NIN-201ENST00000245441 FBN3Q75N90 2809 aa6.16□□□□□ -1.42
NIN-201ENST00000245441 C10orf95Q9H7T3 257 aa6.15□□□□□ -1.43
NIN-201ENST00000245441 H0YAA0 97 aa6.12□□□□□ -1.43
NIN-201ENST00000245441 KRTAP21-3Q3LHN1 58 aa6.12□□□□□ -1.43
NIN-201ENST00000245441 KRTAP1-4P0C5Y4 121 aa6.11□□□□□ -1.43
NIN-201ENST00000245441 CUBNO60494 3623 aa6.1□□□□□ -1.43
NIN-201ENST00000245441 XP32Q5T750 250 aa6.09□□□□□ -1.43
NIN-201ENST00000245441 OTOGQ6ZRI0 2925 aa6.08□□□□□ -1.44
NIN-201ENST00000245441 SVEP1Q4LDE5 3571 aa6.05□□□□□ -1.44
NIN-201ENST00000245441 TPRXLQ17RH7 258 aa6.02□□□□□ -1.45
NIN-201ENST00000245441 P0C880 135 aa6.01□□□□□ -1.45
NIN-201ENST00000245441 TRRAPQ9Y4A5 3859 aa6□□□□□ -1.45
NIN-201ENST00000245441 KRTAP10-8P60410 259 aa5.98□□□□□ -1.45
NIN-201ENST00000245441 MUC3AQ02505 3323 aa5.95□□□□□ -1.46
NIN-201ENST00000245441 VPS13CQ709C8 3753 aa5.93□□□□□ -1.46
NIN-201ENST00000245441 KRTAP13-3Q3SY46 172 aa5.88□□□□□ -1.47
NIN-201ENST00000245441 PRO2289Q9P1D8 64 aa5.87□□□□□ -1.47
NIN-201ENST00000245441 A0A1B0GVY2 172 aa5.82□□□□□ -1.48
NIN-201ENST00000245441 KRTAP10-10P60014 251 aa5.79□□□□□ -1.48
NIN-201ENST00000245441 CSMD2Q7Z408 3487 aa5.72□□□□□ -1.49
NIN-201ENST00000245441 BSNQ9UPA5 3926 aa5.71□□□□□ -1.5
NIN-201ENST00000245441 KRTAP12-2P59991 146 aa5.7□□□□□ -1.5
NIN-201ENST00000245441 KRTAP13-4Q3LI77 160 aa5.65□□□□□ -1.5
NIN-201ENST00000245441 AKAP9Q99996 3911 aa5.64□□□□□ -1.51
NIN-201ENST00000245441 CSMD3Q7Z407 3707 aa5.63□□□□□ -1.51
NIN-201ENST00000245441 KRTAP12-1P59990 96 aa5.61□□□□□ -1.51
NIN-201ENST00000245441 KRTAP3-1Q9BYR8 98 aa5.5□□□□□ -1.53
NIN-201ENST00000245441 ZNF469Q96JG9 3925 aaPredicted RBP5.42□□□□□ -1.54
NIN-201ENST00000245441 KRTAP10-6P60371 365 aaPredicted RBP5.42□□□□□ -1.54
NIN-201ENST00000245441 KRTAP15-1Q3LI76 137 aa5.35□□□□□ -1.55
NIN-201ENST00000245441 ANK3Q12955 4377 aaKnown RBP5.24□□□□□ -1.57
NIN-201ENST00000245441 INE1O15225 51 aa5.23□□□□□ -1.57
NIN-201ENST00000245441 KRTAP3-2Q9BYR7 98 aa5.19□□□□□ -1.58
NIN-201ENST00000245441 KRTAP3-3Q9BYR6 98 aa5.19□□□□□ -1.58
NIN-201ENST00000245441 KRTAP10-12P60413 245 aa5.14□□□□□ -1.59
NIN-201ENST00000245441 MT1HL1P0DM35 61 aa5.14□□□□□ -1.59
NIN-201ENST00000245441 KRTAP23-1A1A580 65 aa5.08□□□□□ -1.6
NIN-201ENST00000245441 LYSTQ99698 3801 aa5.08□□□□□ -1.6
NIN-201ENST00000245441 HUWE1Q7Z6Z7 4374 aaKnown RBP5.02□□□□□ -1.61
NIN-201ENST00000245441 KRTAP10-4P60372 401 aaPredicted RBP5.02□□□□□ -1.61
NIN-201ENST00000245441 ALMS1Q8TCU4 4167 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms