RNA–Protein interactions for RNA: ENST00000223073.6

RBM28-201, Transcript of RNA binding motif protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBM28, Length 15,507 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-201ENST00000223073 CHD7Q9P2D1 2997 aa3.7□□□□□ -1.82
RBM28-201ENST00000223073 TNRC18O15417 2968 aaPredicted RBP3.69□□□□□ -1.82
RBM28-201ENST00000223073 TACC2O95359 2948 aa3.69□□□□□ -1.82
RBM28-201ENST00000223073 SRRM2Q9UQ35 2752 aaKnown RBP3.69□□□□□ -1.82
RBM28-201ENST00000223073 NF1P21359 2839 aa3.69□□□□□ -1.82
RBM28-201ENST00000223073 KRTAP1-5Q9BYS1 174 aa3.68□□□□□ -1.82
RBM28-201ENST00000223073 TPRXLQ17RH7 258 aa3.67□□□□□ -1.82
RBM28-201ENST00000223073 PRO2289Q9P1D8 64 aa3.66□□□□□ -1.82
RBM28-201ENST00000223073 TENM1Q9UKZ4 2725 aa3.66□□□□□ -1.82
RBM28-201ENST00000223073 LAMA3Q16787 3333 aa3.66□□□□□ -1.82
RBM28-201ENST00000223073 KRTAP10-8P60410 259 aa3.65□□□□□ -1.82
RBM28-201ENST00000223073 ZFHX3Q15911 3703 aa3.65□□□□□ -1.83
RBM28-201ENST00000223073 KRTAP13-3Q3SY46 172 aa3.65□□□□□ -1.83
RBM28-201ENST00000223073 DCHS2Q6V1P9 2916 aa3.64□□□□□ -1.83
RBM28-201ENST00000223073 Q5VSD8 79 aa3.63□□□□□ -1.83
RBM28-201ENST00000223073 MKI67P46013 3256 aaKnown RBP3.63□□□□□ -1.83
RBM28-201ENST00000223073 XIRP2A4UGR9 3374 aa3.63□□□□□ -1.83
RBM28-201ENST00000223073 DMXL1Q9Y485 3027 aa3.62□□□□□ -1.83
RBM28-201ENST00000223073 WDFY4Q6ZS81 3184 aa3.61□□□□□ -1.83
RBM28-201ENST00000223073 RANBP2P49792 3224 aaKnown RBP3.6□□□□□ -1.83
RBM28-201ENST00000223073 ADGRG4Q8IZF6 3080 aa3.6□□□□□ -1.83
RBM28-201ENST00000223073 KRTAP10-1P60331 282 aa3.59□□□□□ -1.83
RBM28-201ENST00000223073 KRTAP13-2Q52LG2 175 aa3.59□□□□□ -1.83
RBM28-201ENST00000223073 BRCA2P51587 3418 aa3.58□□□□□ -1.84
RBM28-201ENST00000223073 REV3LO60673 3130 aa3.58□□□□□ -1.84
RBM28-201ENST00000223073 ZANQ9Y493 2812 aa3.58□□□□□ -1.84
RBM28-201ENST00000223073 KRTAP10-2P60368 255 aa3.58□□□□□ -1.84
RBM28-201ENST00000223073 TENM2Q9NT68 2774 aa3.58□□□□□ -1.84
RBM28-201ENST00000223073 UNC80Q8N2C7 3258 aa3.57□□□□□ -1.84
RBM28-201ENST00000223073 FLNCQ14315 2725 aa3.56□□□□□ -1.84
RBM28-201ENST00000223073 ZZEF1O43149 2961 aa3.56□□□□□ -1.84
RBM28-201ENST00000223073 ATMQ13315 3056 aa3.55□□□□□ -1.84
RBM28-201ENST00000223073 KRTAP13-4Q3LI77 160 aa3.55□□□□□ -1.84
RBM28-201ENST00000223073 CELSR3Q9NYQ7 3312 aa3.54□□□□□ -1.84
RBM28-201ENST00000223073 BOD1L1Q8NFC6 3051 aa3.54□□□□□ -1.84
RBM28-201ENST00000223073 LAMA1P25391 3075 aa3.54□□□□□ -1.84
RBM28-201ENST00000223073 TENM4Q6N022 2769 aa3.52□□□□□ -1.85
RBM28-201ENST00000223073 FBN2P35556 2912 aa3.49□□□□□ -1.85
RBM28-201ENST00000223073 KRTAP12-2P59991 146 aa3.48□□□□□ -1.85
RBM28-201ENST00000223073 CDH23Q9H251 3354 aa3.48□□□□□ -1.85
RBM28-201ENST00000223073 CFAP47Q6ZTR5 3102 aa3.48□□□□□ -1.85
RBM28-201ENST00000223073 ALMS1Q8TCU4 4167 aa3.47□□□□□ -1.85
RBM28-201ENST00000223073 KRTAP12-1P59990 96 aa3.47□□□□□ -1.85
RBM28-201ENST00000223073 XP32Q5T750 250 aa3.47□□□□□ -1.85
RBM28-201ENST00000223073 PKD1L1Q8TDX9 2849 aa3.46□□□□□ -1.86
RBM28-201ENST00000223073 COL6A3P12111 3177 aa3.45□□□□□ -1.86
RBM28-201ENST00000223073 CELSR1Q9NYQ6 3014 aa3.44□□□□□ -1.86
RBM28-201ENST00000223073 HTTP42858 3142 aa3.44□□□□□ -1.86
RBM28-201ENST00000223073 DNAH14Q0VDD8 3507 aa3.42□□□□□ -1.86
RBM28-201ENST00000223073 KRTAP1-4P0C5Y4 121 aa3.42□□□□□ -1.86
RBM28-201ENST00000223073 VCANP13611 3396 aa3.42□□□□□ -1.86
RBM28-201ENST00000223073 AKAP9Q99996 3911 aa3.4□□□□□ -1.87
RBM28-201ENST00000223073 MXRA5Q9NR99 2828 aa3.4□□□□□ -1.87
RBM28-201ENST00000223073 KRTAP10-6P60371 365 aaPredicted RBP3.35□□□□□ -1.87
RBM28-201ENST00000223073 VWFP04275 2813 aa3.34□□□□□ -1.87
RBM28-201ENST00000223073 SZT2Q5T011 3432 aa3.34□□□□□ -1.88
RBM28-201ENST00000223073 USP34Q70CQ2 3546 aa3.33□□□□□ -1.88
RBM28-201ENST00000223073 COL7A1Q02388 2944 aa3.32□□□□□ -1.88
RBM28-201ENST00000223073 SPEGQ15772 3267 aa3.31□□□□□ -1.88
RBM28-201ENST00000223073 KRTAP3-1Q9BYR8 98 aa3.31□□□□□ -1.88
RBM28-201ENST00000223073 MEGF8Q7Z7M0 2845 aa3.31□□□□□ -1.88
RBM28-201ENST00000223073 KRTAP21-3Q3LHN1 58 aa3.3□□□□□ -1.88
RBM28-201ENST00000223073 OTOGQ6ZRI0 2925 aa3.27□□□□□ -1.89
RBM28-201ENST00000223073 NBPF19A0A087WUL8 3843 aa3.24□□□□□ -1.89
RBM28-201ENST00000223073 KRTAP3-2Q9BYR7 98 aa3.22□□□□□ -1.89
RBM28-201ENST00000223073 FBN3Q75N90 2809 aa3.21□□□□□ -1.9
RBM28-201ENST00000223073 EYSQ5T1H1 3165 aa3.21□□□□□ -1.9
RBM28-201ENST00000223073 A0A1B0GVY2 172 aa3.21□□□□□ -1.9
RBM28-201ENST00000223073 HRNRQ86YZ3 2850 aaPredicted RBP3.19□□□□□ -1.9
RBM28-201ENST00000223073 SPTBN5Q9NRC6 3674 aaKnown RBP3.16□□□□□ -1.9
RBM28-201ENST00000223073 KRTAP10-10P60014 251 aa3.15□□□□□ -1.9
RBM28-201ENST00000223073 DNAH3Q8TD57 4116 aa3.15□□□□□ -1.91
RBM28-201ENST00000223073 MYO15AQ9UKN7 3530 aa3.13□□□□□ -1.91
RBM28-201ENST00000223073 CMYA5Q8N3K9 4069 aa3.13□□□□□ -1.91
RBM28-201ENST00000223073 ASPMQ8IZT6 3477 aa3.11□□□□□ -1.91
RBM28-201ENST00000223073 FBN1P35555 2871 aaKnown RBP3.1□□□□□ -1.91
RBM28-201ENST00000223073 KRTAP3-3Q9BYR6 98 aa3.09□□□□□ -1.91
RBM28-201ENST00000223073 LOC400499M0QZD8 3231 aa3.09□□□□□ -1.92
RBM28-201ENST00000223073 WDFY3Q8IZQ1 3526 aa3.08□□□□□ -1.92
RBM28-201ENST00000223073 TRRAPQ9Y4A5 3859 aa3.06□□□□□ -1.92
RBM28-201ENST00000223073 ZFHX4Q86UP3 3567 aa3.03□□□□□ -1.92
RBM28-201ENST00000223073 DNAH1Q9P2D7 4330 aa3.01□□□□□ -1.93
RBM28-201ENST00000223073 RELNP78509 3460 aa3.01□□□□□ -1.93
RBM28-201ENST00000223073 DCHS1Q96JQ0 3298 aa3.01□□□□□ -1.93
RBM28-201ENST00000223073 DNAH11Q96DT5 4516 aa3□□□□□ -1.93
RBM28-201ENST00000223073 KRTAP12-3P60328 96 aa2.98□□□□□ -1.93
RBM28-201ENST00000223073 SPENQ96T58 3664 aaKnown RBP2.97□□□□□ -1.93
RBM28-201ENST00000223073 DNAH2Q9P225 4427 aa2.97□□□□□ -1.93
RBM28-201ENST00000223073 KRTAP10-12P60413 245 aa2.96□□□□□ -1.93
RBM28-201ENST00000223073 FRAS1Q86XX4 4008 aa2.96□□□□□ -1.94
RBM28-201ENST00000223073 KRTAP19-4Q3LI73 84 aa2.95□□□□□ -1.94
RBM28-201ENST00000223073 DMDP11532 3685 aa2.94□□□□□ -1.94
RBM28-201ENST00000223073 HUWE1Q7Z6Z7 4374 aaKnown RBP2.94□□□□□ -1.94
RBM28-201ENST00000223073 ZNF469Q96JG9 3925 aaPredicted RBP2.93□□□□□ -1.94
RBM28-201ENST00000223073 DNAH6Q9C0G6 4158 aa2.93□□□□□ -1.94
RBM28-201ENST00000223073 LAMA5O15230 3695 aa2.9□□□□□ -1.94
RBM28-201ENST00000223073 ANK2Q01484 3957 aa2.89□□□□□ -1.95
RBM28-201ENST00000223073 DNAH7Q8WXX0 4024 aa2.89□□□□□ -1.95
RBM28-201ENST00000223073 BSNQ9UPA5 3926 aa2.89□□□□□ -1.95
RBM28-201ENST00000223073 SMG1Q96Q15 3661 aaKnown RBP2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms