RNA–Protein interactions for RNA: ENST00000223073.6

RBM28-201, Transcript of RNA binding motif protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBM28, Length 15,507 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-201ENST00000223073 MYT1Q01538 1121 aa12.09□□□□□ -0.47
RBM28-201ENST00000223073 PELP1Q8IZL8 1130 aaKnown RBP11.9□□□□□ -0.5
RBM28-201ENST00000223073 TTBK1Q5TCY1 1321 aaPredicted RBP11.24□□□□□ -0.61
RBM28-201ENST00000223073 ERICH6Q7L0X2 663 aa11.09□□□□□ -0.63
RBM28-201ENST00000223073 CENPBP07199 599 aaPredicted RBP10.86□□□□□ -0.67
RBM28-201ENST00000223073 CCER1Q8TC90 406 aaPredicted RBP10.85□□□□□ -0.67
RBM28-201ENST00000223073 ZEB1P37275 1124 aaPredicted RBP10.81□□□□□ -0.68
RBM28-201ENST00000223073 YTHDC1Q96MU7 727 aaKnown RBP10.71□□□□□ -0.7
RBM28-201ENST00000223073 SLC24A1O60721 1099 aa10.54□□□□□ -0.72
RBM28-201ENST00000223073 RANGAP1P46060 587 aaPredicted RBP10.52□□□□□ -0.72
RBM28-201ENST00000223073 HRCP23327 699 aa10.37□□□□□ -0.75
RBM28-201ENST00000223073 PCGF6Q9BYE7 350 aa10.37□□□□□ -0.75
RBM28-201ENST00000223073 DCAF8L2P0C7V8 631 aa10.36□□□□□ -0.75
RBM28-201ENST00000223073 NEFLP07196 543 aa10.33□□□□□ -0.76
RBM28-201ENST00000223073 GLIPR1L2Q4G1C9 344 aa10.29□□□□□ -0.76
RBM28-201ENST00000223073 MYT1LQ9UL68 1186 aa10.26□□□□□ -0.77
RBM28-201ENST00000223073 RTL5Q5HYW3 569 aaPredicted RBP10.12□□□□□ -0.79
RBM28-201ENST00000223073 EIF5BO60841 1220 aaKnown RBP10.12□□□□□ -0.79
RBM28-201ENST00000223073 SUPT5HO00267 1087 aaKnown RBP10.11□□□□□ -0.79
RBM28-201ENST00000223073 DAXXQ9UER7 740 aaPredicted RBP10.1□□□□□ -0.79
RBM28-201ENST00000223073 CLSPNQ9HAW4 1339 aa10.09□□□□□ -0.79
RBM28-201ENST00000223073 BCL11AQ9H165 835 aa10.07□□□□□ -0.8
RBM28-201ENST00000223073 TRIM26Q12899 539 aaPredicted RBP10.05□□□□□ -0.8
RBM28-201ENST00000223073 APLP2Q06481 763 aa10.04□□□□□ -0.8
RBM28-201ENST00000223073 ACIN1Q9UKV3 1341 aaKnown RBP9.89□□□□□ -0.83
RBM28-201ENST00000223073 GTF3C3Q9Y5Q9 886 aa9.88□□□□□ -0.83
RBM28-201ENST00000223073 PRKCSHP14314 528 aaPredicted RBP9.85□□□□□ -0.83
RBM28-201ENST00000223073 DIEXFQ68CQ4 756 aaKnown RBP9.85□□□□□ -0.83
RBM28-201ENST00000223073 FAM9AQ8IZU1 332 aaPredicted RBP9.84□□□□□ -0.83
RBM28-201ENST00000223073 ZNF316A6NFI3 1004 aaPredicted RBP9.81□□□□□ -0.84
RBM28-201ENST00000223073 CDK11AQ9UQ88 783 aaPredicted RBP9.81□□□□□ -0.84
RBM28-201ENST00000223073 ANP32EQ9BTT0 268 aa9.7□□□□□ -0.86
RBM28-201ENST00000223073 POLR3GLQ9BT43 218 aa9.7□□□□□ -0.86
RBM28-201ENST00000223073 EHMT2Q96KQ7 1210 aa9.7□□□□□ -0.86
RBM28-201ENST00000223073 ANP32AP39687 249 aaKnown RBP9.66□□□□□ -0.86
RBM28-201ENST00000223073 PPARGC1BQ86YN6 1023 aaKnown RBP9.66□□□□□ -0.86
RBM28-201ENST00000223073 NCLP19338 710 aaKnown RBP9.66□□□□□ -0.86
RBM28-201ENST00000223073 TNNT2P45379 298 aaPredicted RBP9.64□□□□□ -0.87
RBM28-201ENST00000223073 PODXL2Q9NZ53 605 aa9.62□□□□□ -0.87
RBM28-201ENST00000223073 SCAF1Q9H7N4 1312 aaKnown RBP9.62□□□□□ -0.87
RBM28-201ENST00000223073 ANP32BQ92688 251 aaKnown RBP9.61□□□□□ -0.87
RBM28-201ENST00000223073 ZNF326Q5BKZ1 582 aaKnown RBP9.56□□□□□ -0.88
RBM28-201ENST00000223073 ERICH6BQ5W0A0 696 aa9.56□□□□□ -0.88
RBM28-201ENST00000223073 TRIM41Q8WV44 630 aa9.55□□□□□ -0.88
RBM28-201ENST00000223073 SHROOM4Q9ULL8 1493 aa9.48□□□□□ -0.89
RBM28-201ENST00000223073 TRIM44Q96DX7 344 aaPredicted RBP9.48□□□□□ -0.89
RBM28-201ENST00000223073 PKNOX2Q96KN3 472 aa9.47□□□□□ -0.89
RBM28-201ENST00000223073 CDK11BP21127 795 aaKnown RBP9.47□□□□□ -0.89
RBM28-201ENST00000223073 NISCHQ9Y2I1 1504 aa9.47□□□□□ -0.89
RBM28-201ENST00000223073 ZBTB47Q9UFB7 747 aaPredicted RBP9.45□□□□□ -0.9
RBM28-201ENST00000223073 ANP32CO43423 234 aa9.42□□□□□ -0.9
RBM28-201ENST00000223073 NEUROD1Q13562 356 aa9.42□□□□□ -0.9
RBM28-201ENST00000223073 NBR1Q14596 966 aa9.37□□□□□ -0.91
RBM28-201ENST00000223073 BCANQ96GW7 911 aa9.37□□□□□ -0.91
RBM28-201ENST00000223073 A0A0U1RQG5 324 aaPredicted RBP9.36□□□□□ -0.91
RBM28-201ENST00000223073 UBTFP17480 764 aaKnown RBP9.35□□□□□ -0.91
RBM28-201ENST00000223073 DDRGK1Q96HY6 314 aa9.35□□□□□ -0.91
RBM28-201ENST00000223073 CHIC1Q5VXU3 224 aa9.35□□□□□ -0.91
RBM28-201ENST00000223073 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.35□□□□□ -0.91
RBM28-201ENST00000223073 PTMSP20962 102 aa9.35□□□□□ -0.91
RBM28-201ENST00000223073 PPM1GO15355 546 aaPredicted RBP9.32□□□□□ -0.92
RBM28-201ENST00000223073 RSPH6AQ9H0K4 717 aa9.32□□□□□ -0.92
RBM28-201ENST00000223073 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.31□□□□□ -0.92
RBM28-201ENST00000223073 RTN4Q9NQC3 1192 aaKnown RBP9.31□□□□□ -0.92
RBM28-201ENST00000223073 CNGB1Q14028 1251 aaPredicted RBP9.3□□□□□ -0.92
RBM28-201ENST00000223073 NEFMP07197 916 aa9.29□□□□□ -0.92
RBM28-201ENST00000223073 FKBP8Q14318 412 aa9.29□□□□□ -0.92
RBM28-201ENST00000223073 UPF2Q9HAU5 1272 aaKnown RBP9.29□□□□□ -0.92
RBM28-201ENST00000223073 PDE4CQ08493 712 aa9.28□□□□□ -0.92
RBM28-201ENST00000223073 DEKP35659 375 aaKnown RBP9.28□□□□□ -0.92
RBM28-201ENST00000223073 CSRNP3Q8WYN3 585 aa9.28□□□□□ -0.92
RBM28-201ENST00000223073 CCDC136Q96JN2 1154 aa9.28□□□□□ -0.92
RBM28-201ENST00000223073 NAP1L5Q96NT1 182 aaPredicted RBP9.28□□□□□ -0.92
RBM28-201ENST00000223073 HAP1P54257 671 aaPredicted RBP9.26□□□□□ -0.93
RBM28-201ENST00000223073 VSIG10Q8N0Z9 540 aa9.26□□□□□ -0.93
RBM28-201ENST00000223073 HSP90AA1P07900 732 aaKnown RBP9.26□□□□□ -0.93
RBM28-201ENST00000223073 HOMEZQ8IX15 550 aa9.26□□□□□ -0.93
RBM28-201ENST00000223073 AMER1Q5JTC6 1135 aaPredicted RBP9.23□□□□□ -0.93
RBM28-201ENST00000223073 LOC105371045A0A1W2PR82 267 aa9.23□□□□□ -0.93
RBM28-201ENST00000223073 BECN1Q14457 450 aa9.23□□□□□ -0.93
RBM28-201ENST00000223073 DCAF1Q9Y4B6 1507 aa9.22□□□□□ -0.93
RBM28-201ENST00000223073 L1TD1Q5T7N2 865 aaKnown RBP9.21□□□□□ -0.93
RBM28-201ENST00000223073 NOP58Q9Y2X3 529 aaKnown RBP9.21□□□□□ -0.93
RBM28-201ENST00000223073 ARID4BQ4LE39 1312 aaPredicted RBP9.21□□□□□ -0.94
RBM28-201ENST00000223073 C14orf37Q86TY3 774 aa9.21□□□□□ -0.94
RBM28-201ENST00000223073 APPP05067 770 aa9.18□□□□□ -0.94
RBM28-201ENST00000223073 UBE2Q2Q8WVN8 375 aa9.18□□□□□ -0.94
RBM28-201ENST00000223073 USP35Q9P2H5 1018 aa9.17□□□□□ -0.94
RBM28-201ENST00000223073 NCBP3Q53F19 620 aaKnown RBP9.15□□□□□ -0.94
RBM28-201ENST00000223073 NPM2Q86SE8 214 aaKnown RBP9.15□□□□□ -0.94
RBM28-201ENST00000223073 ARXQ96QS3 562 aa9.15□□□□□ -0.95
RBM28-201ENST00000223073 HSP90AA2PQ14568 343 aaPredicted RBP9.14□□□□□ -0.95
RBM28-201ENST00000223073 GOLGA6L22H0YM25 854 aa9.14□□□□□ -0.95
RBM28-201ENST00000223073 HNRNPUL2Q1KMD3 747 aaKnown RBP9.14□□□□□ -0.95
RBM28-201ENST00000223073 TULP1O00294 542 aaPredicted RBP9.13□□□□□ -0.95
RBM28-201ENST00000223073 ANO8Q9HCE9 1232 aaPredicted RBP9.11□□□□□ -0.95
RBM28-201ENST00000223073 CALRP27797 417 aaKnown RBP9.1□□□□□ -0.95
RBM28-201ENST00000223073 PDIA4P13667 645 aaKnown RBP9.09□□□□□ -0.95
RBM28-201ENST00000223073 ATP1B4Q9UN42 357 aaPredicted RBP9.09□□□□□ -0.95
RBM28-201ENST00000223073 LAS1LQ9Y4W2 734 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms