RNA–Protein interactions for RNA: ENST00000218364.4

HTATSF1-201, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-201ENST00000218364 RTL8CO15255 209 aa13.15□□□□□ -0.31
HTATSF1-201ENST00000218364 A0A087X002 238 aa13.14□□□□□ -0.31
HTATSF1-201ENST00000218364 NOTCH2NLQ7Z3S9 236 aa13.14□□□□□ -0.31
HTATSF1-201ENST00000218364 ANAPC11Q9NYG5 84 aa13.14□□□□□ -0.31
HTATSF1-201ENST00000218364 LINC01558Q9Y6Z2 57 aa13.11□□□□□ -0.31
HTATSF1-201ENST00000218364 VPS13DQ5THJ4 4388 aa13.09□□□□□ -0.31
HTATSF1-201ENST00000218364 HRES1P13985 223 aa13.08□□□□□ -0.32
HTATSF1-201ENST00000218364 DNAH8Q96JB1 4490 aa13.07□□□□□ -0.32
HTATSF1-201ENST00000218364 LCA10Q71F78 164 aa13.06□□□□□ -0.32
HTATSF1-201ENST00000218364 A6NED7 52 aa13.03□□□□□ -0.32
HTATSF1-201ENST00000218364 KRTAP13-3Q3SY46 172 aa13.03□□□□□ -0.32
HTATSF1-201ENST00000218364 SPAG11AQ6PDA7 123 aa13.03□□□□□ -0.32
HTATSF1-201ENST00000218364 TGP01266 2768 aa13.03□□□□□ -0.32
HTATSF1-201ENST00000218364 ATP11AUNQ6ZP68 121 aa13□□□□□ -0.33
HTATSF1-201ENST00000218364 Q5W150 140 aa13□□□□□ -0.33
HTATSF1-201ENST00000218364 IGLV7-43P04211 117 aa12.99□□□□□ -0.33
HTATSF1-201ENST00000218364 STARD9Q9P2P6 4700 aa12.98□□□□□ -0.33
HTATSF1-201ENST00000218364 DNAH17Q9UFH2 4485 aa12.98□□□□□ -0.33
HTATSF1-201ENST00000218364 SEC61GP60059 68 aa12.98□□□□□ -0.33
HTATSF1-201ENST00000218364 SPINK6Q6UWN8 80 aa12.98□□□□□ -0.33
HTATSF1-201ENST00000218364 CDC42SE1Q9NRR8 79 aa12.98□□□□□ -0.33
HTATSF1-201ENST00000218364 HECTD4Q9Y4D8 3996 aa12.97□□□□□ -0.33
HTATSF1-201ENST00000218364 C8orf87E5RJ46 101 aa12.92□□□□□ -0.34
HTATSF1-201ENST00000218364 CIRBP-AS1Q8TBR5 109 aa12.92□□□□□ -0.34
HTATSF1-201ENST00000218364 SSBP3-AS1Q7Z2R9 100 aa12.92□□□□□ -0.34
HTATSF1-201ENST00000218364 SPTSSBQ8NFR3 76 aa12.92□□□□□ -0.34
HTATSF1-201ENST00000218364 FRAS1Q86XX4 4008 aa12.89□□□□□ -0.35
HTATSF1-201ENST00000218364 DNAH2Q9P225 4427 aa12.87□□□□□ -0.35
HTATSF1-201ENST00000218364 A6NN06 94 aa12.84□□□□□ -0.35
HTATSF1-201ENST00000218364 C1orf134Q5TEV5 83 aa12.84□□□□□ -0.35
HTATSF1-201ENST00000218364 KTN1-AS1Q86SY8 53 aa12.84□□□□□ -0.35
HTATSF1-201ENST00000218364 ACYP2P14621 99 aa12.83□□□□□ -0.36
HTATSF1-201ENST00000218364 SPINK7P58062 85 aa12.83□□□□□ -0.36
HTATSF1-201ENST00000218364 PRR26Q8N8Z3 221 aa12.83□□□□□ -0.36
HTATSF1-201ENST00000218364 LINC00313P59037 77 aa12.78□□□□□ -0.36
HTATSF1-201ENST00000218364 DMAC1Q96GE9 116 aa12.78□□□□□ -0.36
HTATSF1-201ENST00000218364 FAM229AH3BQW9 127 aa12.77□□□□□ -0.37
HTATSF1-201ENST00000218364 KMT2AQ03164 3969 aa12.75□□□□□ -0.37
HTATSF1-201ENST00000218364 ALMS1Q8TCU4 4167 aa12.71□□□□□ -0.37
HTATSF1-201ENST00000218364 IGKV2-30P06310 120 aa12.7□□□□□ -0.38
HTATSF1-201ENST00000218364 LY6G6CO95867 125 aa12.69□□□□□ -0.38
HTATSF1-201ENST00000218364 KRTAP13-2Q52LG2 175 aa12.69□□□□□ -0.38
HTATSF1-201ENST00000218364 KRTAP16-1A8MUX0 517 aa12.66□□□□□ -0.38
HTATSF1-201ENST00000218364 KRTAP10-2P60368 255 aa12.64□□□□□ -0.39
HTATSF1-201ENST00000218364 RETNLBQ9BQ08 111 aa12.62□□□□□ -0.39
HTATSF1-201ENST00000218364 DNAH11Q96DT5 4516 aa12.61□□□□□ -0.39
HTATSF1-201ENST00000218364 C7orf65Q6ZTY9 151 aa12.6□□□□□ -0.39
HTATSF1-201ENST00000218364 Q6ZSA8 131 aa12.58□□□□□ -0.4
HTATSF1-201ENST00000218364 DNAH5Q8TE73 4624 aa12.57□□□□□ -0.4
HTATSF1-201ENST00000218364 RBM12B-AS1Q9P1G2 102 aa12.56□□□□□ -0.4
HTATSF1-201ENST00000218364 A0A1B0GU69 56 aa12.53□□□□□ -0.4
HTATSF1-201ENST00000218364 KRTAP1-4P0C5Y4 121 aa12.52□□□□□ -0.4
HTATSF1-201ENST00000218364 DNAH6Q9C0G6 4158 aa12.52□□□□□ -0.4
HTATSF1-201ENST00000218364 HYDINQ4G0P3 5121 aa12.5□□□□□ -0.41
HTATSF1-201ENST00000218364 KRTAP10-1P60331 282 aa12.5□□□□□ -0.41
HTATSF1-201ENST00000218364 SACSQ9NZJ4 4579 aa12.47□□□□□ -0.41
HTATSF1-201ENST00000218364 SPATA8Q6RVD6 105 aa12.45□□□□□ -0.42
HTATSF1-201ENST00000218364 IGKV2D-30A0A075B6S6 120 aa12.44□□□□□ -0.42
HTATSF1-201ENST00000218364 LRP1BQ9NZR2 4599 aa12.43□□□□□ -0.42
HTATSF1-201ENST00000218364 C4orf48Q5BLP8 95 aa12.36□□□□□ -0.43
HTATSF1-201ENST00000218364 SPINK1P00995 79 aa12.35□□□□□ -0.43
HTATSF1-201ENST00000218364 UQCR11O14957 56 aa12.35□□□□□ -0.43
HTATSF1-201ENST00000218364 PKD1P98161 4303 aa12.34□□□□□ -0.43
HTATSF1-201ENST00000218364 PLA2G1BP04054 148 aaKnown RBP12.34□□□□□ -0.43
HTATSF1-201ENST00000218364 KMT2CQ8NEZ4 4911 aaKnown RBP12.33□□□□□ -0.44
HTATSF1-201ENST00000218364 TYMSOSQ8TAI1 123 aa12.33□□□□□ -0.44
HTATSF1-201ENST00000218364 MIR22HGQ0VDD5 57 aa12.33□□□□□ -0.44
HTATSF1-201ENST00000218364 RYR2Q92736 4967 aa12.28□□□□□ -0.44
HTATSF1-201ENST00000218364 FAT2Q9NYQ8 4349 aa12.25□□□□□ -0.45
HTATSF1-201ENST00000218364 RPS29P62273 56 aaKnown RBP12.23□□□□□ -0.45
HTATSF1-201ENST00000218364 VPS13BQ7Z7G8 4022 aa12.19□□□□□ -0.46
HTATSF1-201ENST00000218364 PRAC1Q96KF2 57 aa12.18□□□□□ -0.46
HTATSF1-201ENST00000218364 LINC00304Q8N9R0 145 aa12.16□□□□□ -0.46
HTATSF1-201ENST00000218364 Q8N1X5 172 aa12.16□□□□□ -0.46
HTATSF1-201ENST00000218364 ADM2Q7Z4H4 148 aa12.15□□□□□ -0.46
HTATSF1-201ENST00000218364 RYR3Q15413 4870 aa12.11□□□□□ -0.47
HTATSF1-201ENST00000218364 A8MUU9 505 aa12.03□□□□□ -0.48
HTATSF1-201ENST00000218364 C20orf166-AS1Q96NR2 134 aa12.03□□□□□ -0.48
HTATSF1-201ENST00000218364 A0A1B0GVY2 172 aa11.99□□□□□ -0.49
HTATSF1-201ENST00000218364 PKHD1P08F94 4074 aa11.99□□□□□ -0.49
HTATSF1-201ENST00000218364 KRTAP3-1Q9BYR8 98 aa11.94□□□□□ -0.5
HTATSF1-201ENST00000218364 C9orf92A6NGG3 77 aa11.93□□□□□ -0.5
HTATSF1-201ENST00000218364 LINC01554Q52M75 96 aa11.91□□□□□ -0.5
HTATSF1-201ENST00000218364 DYNC1H1Q14204 4646 aaKnown RBP11.9□□□□□ -0.5
HTATSF1-201ENST00000218364 H0YAA0 97 aa11.89□□□□□ -0.51
HTATSF1-201ENST00000218364 SMR3BP02814 79 aaPredicted RBP11.85□□□□□ -0.51
HTATSF1-201ENST00000218364 CSAG1Q6PB30 78 aa11.83□□□□□ -0.52
HTATSF1-201ENST00000218364 PKHD1L1Q86WI1 4243 aa11.83□□□□□ -0.52
HTATSF1-201ENST00000218364 KRTAP10-4P60372 401 aaPredicted RBP11.82□□□□□ -0.52
HTATSF1-201ENST00000218364 A0A1B0GU33 70 aa11.81□□□□□ -0.52
HTATSF1-201ENST00000218364 H1FX-AS1Q4G0G2 97 aa11.78□□□□□ -0.52
HTATSF1-201ENST00000218364 APOBP04114 4563 aaKnown RBP11.74□□□□□ -0.53
HTATSF1-201ENST00000218364 COX6B2Q6YFQ2 88 aa11.71□□□□□ -0.53
HTATSF1-201ENST00000218364 EPPK1P58107 5090 aaKnown RBP11.67□□□□□ -0.54
HTATSF1-201ENST00000218364 FAT1Q14517 4588 aa11.64□□□□□ -0.55
HTATSF1-201ENST00000218364 KRTAP25-1Q3LHN0 102 aa11.54□□□□□ -0.56
HTATSF1-201ENST00000218364 HSPG2P98160 4391 aa11.52□□□□□ -0.56
HTATSF1-201ENST00000218364 RYR1P21817 5038 aa11.52□□□□□ -0.57
HTATSF1-201ENST00000218364 KIAA1109Q2LD37 5005 aa11.48□□□□□ -0.57
HTATSF1-201ENST00000218364 K7ERS5 55 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms