RNA–Protein interactions for RNA: ENST00000218364.4

HTATSF1-201, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-201ENST00000218364 KRTAP4-7Q9BYR0 210 aa7.67□□□□□ -1.18
HTATSF1-201ENST00000218364 FCGBPQ9Y6R7 5405 aaPredicted RBP7.66□□□□□ -1.18
HTATSF1-201ENST00000218364 MT1LQ93083 61 aa7.62□□□□□ -1.19
HTATSF1-201ENST00000218364 MT1EP04732 61 aa7.59□□□□□ -1.19
HTATSF1-201ENST00000218364 KRTAP9-6A0A140TA67 174 aa7.46□□□□□ -1.21
HTATSF1-201ENST00000218364 MACF1Q9UPN3 7388 aaKnown RBP7.34□□□□□ -1.23
HTATSF1-201ENST00000218364 SYNE2Q8WXH0 6885 aaKnown RBP7.15□□□□□ -1.26
HTATSF1-201ENST00000218364 LOC100996750A0A140TA64 210 aa7.14□□□□□ -1.27
HTATSF1-201ENST00000218364 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.13□□□□□ -1.27
HTATSF1-201ENST00000218364 KRTAP4-3Q9BYR4 195 aa7.13□□□□□ -1.27
HTATSF1-201ENST00000218364 MT1GP13640 62 aa7.08□□□□□ -1.28
HTATSF1-201ENST00000218364 MT1MQ8N339 61 aa7.08□□□□□ -1.28
HTATSF1-201ENST00000218364 KRTAP19-3Q7Z4W3 81 aa7.05□□□□□ -1.28
HTATSF1-201ENST00000218364 SPRR2FQ96RM1 72 aa6.98□□□□□ -1.29
HTATSF1-201ENST00000218364 MUC12Q9UKN1 5478 aa6.94□□□□□ -1.3
HTATSF1-201ENST00000218364 KRTAP5-9P26371 169 aa6.91□□□□□ -1.3
HTATSF1-201ENST00000218364 KRTAP6-3Q3LI67 103 aa6.89□□□□□ -1.31
HTATSF1-201ENST00000218364 KRTAP9-7A8MTY7 169 aa6.81□□□□□ -1.32
HTATSF1-201ENST00000218364 LCE5AQ5TCM9 118 aa6.8□□□□□ -1.32
HTATSF1-201ENST00000218364 MDN1Q9NU22 5596 aa6.8□□□□□ -1.32
HTATSF1-201ENST00000218364 KRTAP12-4P60329 112 aa6.8□□□□□ -1.32
HTATSF1-201ENST00000218364 SPRR2EP22531 72 aa6.67□□□□□ -1.34
HTATSF1-201ENST00000218364 SPRR2BP35325 72 aa6.67□□□□□ -1.34
HTATSF1-201ENST00000218364 SPRR2AP35326 72 aa6.67□□□□□ -1.34
HTATSF1-201ENST00000218364 LCE1AQ5T7P2 110 aa6.67□□□□□ -1.34
HTATSF1-201ENST00000218364 LCE3BQ5TA77 95 aa6.57□□□□□ -1.36
HTATSF1-201ENST00000218364 MT1AP04731 61 aa6.54□□□□□ -1.36
HTATSF1-201ENST00000218364 NEBP20929 6669 aa6.48□□□□□ -1.37
HTATSF1-201ENST00000218364 DSTQ03001 7570 aaKnown RBP6.48□□□□□ -1.37
HTATSF1-201ENST00000218364 KRTAP4-9Q9BYQ8 210 aa6.46□□□□□ -1.38
HTATSF1-201ENST00000218364 KRTAP6-1Q3LI64 71 aa6.45□□□□□ -1.38
HTATSF1-201ENST00000218364 SPRR2DP22532 72 aa6.43□□□□□ -1.38
HTATSF1-201ENST00000218364 LCE3DQ9BYE3 92 aa6.3□□□□□ -1.4
HTATSF1-201ENST00000218364 SYNE1Q8NF91 8797 aaKnown RBP6.28□□□□□ -1.4
HTATSF1-201ENST00000218364 KRTAP5-5Q701N2 237 aaPredicted RBP6.27□□□□□ -1.41
HTATSF1-201ENST00000218364 LCE3EQ5T5B0 92 aa6.25□□□□□ -1.41
HTATSF1-201ENST00000218364 KRTAP20-1Q3LI63 56 aa6.03□□□□□ -1.44
HTATSF1-201ENST00000218364 PRM1P04553 51 aa6.02□□□□□ -1.45
HTATSF1-201ENST00000218364 KRTAP9-4Q9BYQ2 154 aa6.02□□□□□ -1.45
HTATSF1-201ENST00000218364 KRTAP2-2Q9BYT5 123 aa5.94□□□□□ -1.46
HTATSF1-201ENST00000218364 KRTAP6-2Q3LI66 62 aa5.83□□□□□ -1.48
HTATSF1-201ENST00000218364 MT3P25713 68 aa5.74□□□□□ -1.49
HTATSF1-201ENST00000218364 KRTAP5-4Q6L8H1 288 aa5.72□□□□□ -1.49
HTATSF1-201ENST00000218364 LCE4AQ5TA78 99 aa5.67□□□□□ -1.5
HTATSF1-201ENST00000218364 MT4P47944 62 aa5.61□□□□□ -1.51
HTATSF1-201ENST00000218364 KRTAP4-6Q9BYQ5 205 aa5.53□□□□□ -1.52
HTATSF1-201ENST00000218364 LCE1DQ5T752 114 aa5.52□□□□□ -1.53
HTATSF1-201ENST00000218364 HMCN1Q96RW7 5635 aa5.48□□□□□ -1.53
HTATSF1-201ENST00000218364 KRTAP20-2Q3LI61 65 aa5.38□□□□□ -1.55
HTATSF1-201ENST00000218364 OBSCNQ5VST9 7968 aa5.35□□□□□ -1.55
HTATSF1-201ENST00000218364 KRTAP5-3Q6L8H2 238 aa5.18□□□□□ -1.58
HTATSF1-201ENST00000218364 KRTAP5-2Q701N4 177 aa5.16□□□□□ -1.58
HTATSF1-201ENST00000218364 AHNAK2Q8IVF2 5795 aa4.91□□□□□ -1.62
HTATSF1-201ENST00000218364 MUC5ACP98088 5654 aa4.79□□□□□ -1.64
HTATSF1-201ENST00000218364 KRTAP4-11Q9BYQ6 195 aa4.72□□□□□ -1.65
HTATSF1-201ENST00000218364 LCE1EQ5T753 118 aa4.68□□□□□ -1.66
HTATSF1-201ENST00000218364 KRTAP5-10Q6L8G5 202 aa4.67□□□□□ -1.66
HTATSF1-201ENST00000218364 GPR98Q8WXG9 6306 aa4.59□□□□□ -1.67
HTATSF1-201ENST00000218364 KRTAP5-1Q6L8H4 278 aa4.56□□□□□ -1.68
HTATSF1-201ENST00000218364 KRTAP5-8O75690 187 aa4.53□□□□□ -1.68
HTATSF1-201ENST00000218364 LCE1BQ5T7P3 118 aa4.53□□□□□ -1.68
HTATSF1-201ENST00000218364 LCE1CQ5T751 118 aa4.41□□□□□ -1.7
HTATSF1-201ENST00000218364 KRTAP4-2Q9BYR5 136 aa4.41□□□□□ -1.7
HTATSF1-201ENST00000218364 KRTAP5-7Q6L8G8 165 aa4.34□□□□□ -1.72
HTATSF1-201ENST00000218364 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.21□□□□□ -1.73
HTATSF1-201ENST00000218364 KRTAP21-2Q3LI59 83 aa4.18□□□□□ -1.74
HTATSF1-201ENST00000218364 KRTAP9-9Q9BYP9 154 aa4.15□□□□□ -1.75
HTATSF1-201ENST00000218364 MUC5BQ9HC84 5762 aaPredicted RBP3.98□□□□□ -1.77
HTATSF1-201ENST00000218364 KRTAP21-1Q3LI58 79 aa3.87□□□□□ -1.79
HTATSF1-201ENST00000218364 KRTAP5-11Q6L8G4 156 aa3.77□□□□□ -1.81
HTATSF1-201ENST00000218364 AHNAKQ09666 5890 aaKnown RBP3.76□□□□□ -1.81
HTATSF1-201ENST00000218364 KRTAP4-4Q9BYR3 166 aa3.73□□□□□ -1.81
HTATSF1-201ENST00000218364 KRTAP4-12Q9BQ66 201 aa3.66□□□□□ -1.82
HTATSF1-201ENST00000218364 MUC19Q7Z5P9 8384 aa3.49□□□□□ -1.85
HTATSF1-201ENST00000218364 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
HTATSF1-201ENST00000218364 PHGR1C9JFL3 82 aa3.25□□□□□ -1.89
HTATSF1-201ENST00000218364 MUC16Q8WXI7 14507 aa2.2□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 12.3 ms