RNA–Protein interactions for RNA: ENST00000204005.13

LTBP4-201, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP4, Length 5,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-201ENST00000204005 DMAC1Q96GE9 116 aa11.14□□□□□ -0.63
LTBP4-201ENST00000204005 A0A0D9SG42 100 aa11.13□□□□□ -0.63
LTBP4-201ENST00000204005 DMBT1Q9UGM3 2413 aaPredicted RBP11.13□□□□□ -0.63
LTBP4-201ENST00000204005 LINC01554Q52M75 96 aa11.1□□□□□ -0.63
LTBP4-201ENST00000204005 KRTAP13-1Q8IUC0 172 aa11.06□□□□□ -0.64
LTBP4-201ENST00000204005 PRAC1Q96KF2 57 aa11.05□□□□□ -0.64
LTBP4-201ENST00000204005 NOTCH2NLQ7Z3S9 236 aa11.05□□□□□ -0.64
LTBP4-201ENST00000204005 MXRA5Q9NR99 2828 aa11.04□□□□□ -0.64
LTBP4-201ENST00000204005 ASB16-AS1Q495Z4 193 aa11.03□□□□□ -0.64
LTBP4-201ENST00000204005 SEC61BP60468 96 aaKnown RBP11.02□□□□□ -0.65
LTBP4-201ENST00000204005 CSAG1Q6PB30 78 aa11.02□□□□□ -0.65
LTBP4-201ENST00000204005 S4R3F8 94 aa10.99□□□□□ -0.65
LTBP4-201ENST00000204005 RPS29P62273 56 aaKnown RBP10.96□□□□□ -0.65
LTBP4-201ENST00000204005 RELNP78509 3460 aa10.93□□□□□ -0.66
LTBP4-201ENST00000204005 KRTAP13-2Q52LG2 175 aa10.92□□□□□ -0.66
LTBP4-201ENST00000204005 M0R2T5 61 aa10.87□□□□□ -0.67
LTBP4-201ENST00000204005 WDFY3Q8IZQ1 3526 aa10.85□□□□□ -0.67
LTBP4-201ENST00000204005 DCHS1Q96JQ0 3298 aa10.84□□□□□ -0.67
LTBP4-201ENST00000204005 SPATA8Q6RVD6 105 aa10.79□□□□□ -0.68
LTBP4-201ENST00000204005 CAMK2N1Q7Z7J9 78 aa10.78□□□□□ -0.68
LTBP4-201ENST00000204005 H1FX-AS1Q4G0G2 97 aa10.76□□□□□ -0.69
LTBP4-201ENST00000204005 CELSR1Q9NYQ6 3014 aa10.76□□□□□ -0.69
LTBP4-201ENST00000204005 A6NN06 94 aa10.75□□□□□ -0.69
LTBP4-201ENST00000204005 LAMA5O15230 3695 aa10.74□□□□□ -0.69
LTBP4-201ENST00000204005 MUC3AQ02505 3323 aa10.74□□□□□ -0.69
LTBP4-201ENST00000204005 TENM3Q9P273 2699 aa10.74□□□□□ -0.69
LTBP4-201ENST00000204005 PDZD2O15018 2839 aa10.73□□□□□ -0.69
LTBP4-201ENST00000204005 R4GN34 69 aa10.71□□□□□ -0.69
LTBP4-201ENST00000204005 A8MU10 97 aa10.69□□□□□ -0.7
LTBP4-201ENST00000204005 RPL37P61927 97 aaKnown RBP10.69□□□□□ -0.7
LTBP4-201ENST00000204005 TENM1Q9UKZ4 2725 aa10.67□□□□□ -0.7
LTBP4-201ENST00000204005 ZFHX4Q86UP3 3567 aa10.65□□□□□ -0.7
LTBP4-201ENST00000204005 ROMO1P60602 79 aa10.61□□□□□ -0.71
LTBP4-201ENST00000204005 DMDP11532 3685 aa10.6□□□□□ -0.71
LTBP4-201ENST00000204005 ASPMQ8IZT6 3477 aa10.56□□□□□ -0.72
LTBP4-201ENST00000204005 TENM2Q9NT68 2774 aa10.55□□□□□ -0.72
LTBP4-201ENST00000204005 KRTAP1-4P0C5Y4 121 aa10.55□□□□□ -0.72
LTBP4-201ENST00000204005 M0QZ58 72 aa10.52□□□□□ -0.73
LTBP4-201ENST00000204005 OTOGQ6ZRI0 2925 aa10.51□□□□□ -0.73
LTBP4-201ENST00000204005 LUZP6Q538Z0 58 aa10.5□□□□□ -0.73
LTBP4-201ENST00000204005 ADM2Q7Z4H4 148 aa10.5□□□□□ -0.73
LTBP4-201ENST00000204005 A8MUU9 505 aa10.48□□□□□ -0.73
LTBP4-201ENST00000204005 H3BS24 57 aa10.47□□□□□ -0.73
LTBP4-201ENST00000204005 C20orf166-AS1Q96NR2 134 aa10.45□□□□□ -0.74
LTBP4-201ENST00000204005 PKD1L1Q8TDX9 2849 aa10.44□□□□□ -0.74
LTBP4-201ENST00000204005 SMG1Q96Q15 3661 aaKnown RBP10.42□□□□□ -0.74
LTBP4-201ENST00000204005 CSMD1Q96PZ7 3565 aa10.42□□□□□ -0.74
LTBP4-201ENST00000204005 VWFP04275 2813 aa10.38□□□□□ -0.75
LTBP4-201ENST00000204005 FBN1P35555 2871 aaKnown RBP10.37□□□□□ -0.75
LTBP4-201ENST00000204005 KRTAP25-1Q3LHN0 102 aa10.35□□□□□ -0.75
LTBP4-201ENST00000204005 NBPF19A0A087WUL8 3843 aa10.35□□□□□ -0.75
LTBP4-201ENST00000204005 TGP01266 2768 aa10.34□□□□□ -0.75
LTBP4-201ENST00000204005 XP32Q5T750 250 aa10.22□□□□□ -0.77
LTBP4-201ENST00000204005 PLAC4Q8WY50 150 aa10.21□□□□□ -0.77
LTBP4-201ENST00000204005 KRTAP16-1A8MUX0 517 aa10.21□□□□□ -0.78
LTBP4-201ENST00000204005 ZFHX3Q15911 3703 aa10.18□□□□□ -0.78
LTBP4-201ENST00000204005 A0A1B0GVY2 172 aa10.14□□□□□ -0.79
LTBP4-201ENST00000204005 SVEP1Q4LDE5 3571 aa10.11□□□□□ -0.79
LTBP4-201ENST00000204005 ANK3Q12955 4377 aaKnown RBP10.1□□□□□ -0.79
LTBP4-201ENST00000204005 TPRXLQ17RH7 258 aa10.09□□□□□ -0.79
LTBP4-201ENST00000204005 KRTAP13-3Q3SY46 172 aa10.09□□□□□ -0.79
LTBP4-201ENST00000204005 H0YAA0 97 aa10.02□□□□□ -0.81
LTBP4-201ENST00000204005 A0A0A0MQY5 61 aa10.01□□□□□ -0.81
LTBP4-201ENST00000204005 SPENQ96T58 3664 aaKnown RBP10□□□□□ -0.81
LTBP4-201ENST00000204005 KRTAP10-8P60410 259 aa9.98□□□□□ -0.81
LTBP4-201ENST00000204005 CSMD2Q7Z408 3487 aa9.95□□□□□ -0.82
LTBP4-201ENST00000204005 BSNQ9UPA5 3926 aa9.88□□□□□ -0.83
LTBP4-201ENST00000204005 TRRAPQ9Y4A5 3859 aa9.81□□□□□ -0.84
LTBP4-201ENST00000204005 NDUFAF8A1L188 74 aa9.79□□□□□ -0.84
LTBP4-201ENST00000204005 FBN3Q75N90 2809 aa9.76□□□□□ -0.85
LTBP4-201ENST00000204005 CUBNO60494 3623 aa9.74□□□□□ -0.85
LTBP4-201ENST00000204005 SRRM2Q9UQ35 2752 aaKnown RBP9.73□□□□□ -0.85
LTBP4-201ENST00000204005 C10orf95Q9H7T3 257 aa9.72□□□□□ -0.85
LTBP4-201ENST00000204005 TNP1P09430 55 aa9.71□□□□□ -0.86
LTBP4-201ENST00000204005 MEGF8Q7Z7M0 2845 aa9.66□□□□□ -0.86
LTBP4-201ENST00000204005 P0C880 135 aa9.65□□□□□ -0.87
LTBP4-201ENST00000204005 PP632Q6XCG6 107 aa9.52□□□□□ -0.89
LTBP4-201ENST00000204005 KRTAP10-10P60014 251 aa9.49□□□□□ -0.89
LTBP4-201ENST00000204005 KRTAP3-1Q9BYR8 98 aa9.49□□□□□ -0.89
LTBP4-201ENST00000204005 COL7A1Q02388 2944 aa9.47□□□□□ -0.89
LTBP4-201ENST00000204005 VPS13CQ709C8 3753 aa9.39□□□□□ -0.91
LTBP4-201ENST00000204005 HUWE1Q7Z6Z7 4374 aaKnown RBP9.39□□□□□ -0.91
LTBP4-201ENST00000204005 KRTAP12-2P59991 146 aa9.33□□□□□ -0.92
LTBP4-201ENST00000204005 MT1HL1P0DM35 61 aa9.28□□□□□ -0.92
LTBP4-201ENST00000204005 KRTAP10-4P60372 401 aaPredicted RBP9.23□□□□□ -0.93
LTBP4-201ENST00000204005 KRTAP12-1P59990 96 aa9.22□□□□□ -0.93
LTBP4-201ENST00000204005 PRO2289Q9P1D8 64 aa9.22□□□□□ -0.93
LTBP4-201ENST00000204005 KRTAP10-6P60371 365 aaPredicted RBP9.19□□□□□ -0.94
LTBP4-201ENST00000204005 ZNF469Q96JG9 3925 aaPredicted RBP9.17□□□□□ -0.94
LTBP4-201ENST00000204005 KRTAP13-4Q3LI77 160 aa9.15□□□□□ -0.94
LTBP4-201ENST00000204005 AKAP9Q99996 3911 aa9.07□□□□□ -0.96
LTBP4-201ENST00000204005 DNAH9Q9NYC9 4486 aa9.06□□□□□ -0.96
LTBP4-201ENST00000204005 KRTAP4-5Q9BYR2 181 aa8.99□□□□□ -0.97
LTBP4-201ENST00000204005 ALMS1Q8TCU4 4167 aa8.96□□□□□ -0.97
LTBP4-201ENST00000204005 KRTAP3-3Q9BYR6 98 aa8.94□□□□□ -0.98
LTBP4-201ENST00000204005 KRTAP3-2Q9BYR7 98 aa8.93□□□□□ -0.98
LTBP4-201ENST00000204005 DNAH5Q8TE73 4624 aa8.82□□□□□ -1
LTBP4-201ENST00000204005 DNHD1Q96M86 4753 aa8.79□□□□□ -1
LTBP4-201ENST00000204005 PLECQ15149 4684 aaKnown RBP8.78□□□□□ -1
LTBP4-201ENST00000204005 CSMD3Q7Z407 3707 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms