RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 KRTAP17-1Q9BYP8 105 aa3.65□□□□□ -1.83
HDAC8-216ENST00000470998 IGLV1-50A0A075B6I6 118 aa3.64□□□□□ -1.83
HDAC8-216ENST00000470998 TRBV7-4A0A0J9YYF1 115 aa3.64□□□□□ -1.83
HDAC8-216ENST00000470998 ETDCA0A1B0GVM5 59 aa3.64□□□□□ -1.83
HDAC8-216ENST00000470998 ATOX1O00244 68 aa3.64□□□□□ -1.83
HDAC8-216ENST00000470998 Q6ZRX8 168 aa3.64□□□□□ -1.83
HDAC8-216ENST00000470998 MRPL55Q7Z7F7 128 aaKnown RBP3.64□□□□□ -1.83
HDAC8-216ENST00000470998 SMCR5Q8TEV8 140 aa3.64□□□□□ -1.83
HDAC8-216ENST00000470998 C7orf33Q8WU49 177 aa3.64□□□□□ -1.83
HDAC8-216ENST00000470998 PCLOQ9Y6V0 5065 aa3.64□□□□□ -1.83
HDAC8-216ENST00000470998 IGLV5-48A0A075B6I7 105 aa3.63□□□□□ -1.83
HDAC8-216ENST00000470998 BCE1O60756 84 aa3.63□□□□□ -1.83
HDAC8-216ENST00000470998 CDK2AP2O75956 126 aa3.63□□□□□ -1.83
HDAC8-216ENST00000470998 LINC00846Q9NV44 126 aa3.63□□□□□ -1.83
HDAC8-216ENST00000470998 FAM236AA0A1B0GUQ0 79 aa3.62□□□□□ -1.83
HDAC8-216ENST00000470998 FAM236BA0A1B0GV22 79 aa3.62□□□□□ -1.83
HDAC8-216ENST00000470998 RPL37AP8A6NKH3 93 aa3.62□□□□□ -1.83
HDAC8-216ENST00000470998 KRTAP4-16G5E9R7 235 aaPredicted RBP3.62□□□□□ -1.83
HDAC8-216ENST00000470998 HIST1H4AP62805 103 aaKnown RBP3.62□□□□□ -1.83
HDAC8-216ENST00000470998 CXCL6P80162 114 aa3.62□□□□□ -1.83
HDAC8-216ENST00000470998 SERTAD4-AS1Q5TG53 156 aa3.62□□□□□ -1.83
HDAC8-216ENST00000470998 H0Y9J4 135 aa3.61□□□□□ -1.83
HDAC8-216ENST00000470998 SMIM20Q8N5G0 67 aa3.61□□□□□ -1.83
HDAC8-216ENST00000470998 MPLKIPQ8TAP9 179 aa3.61□□□□□ -1.83
HDAC8-216ENST00000470998 LRP1BQ9NZR2 4599 aa3.6□□□□□ -1.83
HDAC8-216ENST00000470998 PKHD1P08F94 4074 aa3.6□□□□□ -1.83
HDAC8-216ENST00000470998 FUSP35637 526 aaKnown RBP eCLIP3.6□□□□□ -1.83
HDAC8-216ENST00000470998 REG3GQ6UW15 175 aa3.6□□□□□ -1.83
HDAC8-216ENST00000470998 C9orf163Q8N9P6 203 aa3.6□□□□□ -1.83
HDAC8-216ENST00000470998 F8WEM9 126 aa3.59□□□□□ -1.83
HDAC8-216ENST00000470998 UQCRQO14949 82 aa3.59□□□□□ -1.83
HDAC8-216ENST00000470998 KRTAP5-3Q6L8H2 238 aa3.59□□□□□ -1.83
HDAC8-216ENST00000470998 FAM19A5Q7Z5A7 132 aaPredicted RBP3.59□□□□□ -1.83
HDAC8-216ENST00000470998 KRTAP1-5Q9BYS1 174 aa3.59□□□□□ -1.83
HDAC8-216ENST00000470998 ABCA13Q86UQ4 5058 aa3.59□□□□□ -1.84
HDAC8-216ENST00000470998 DNAH5Q8TE73 4624 aa3.58□□□□□ -1.84
HDAC8-216ENST00000470998 A0A096LNI7 61 aa3.58□□□□□ -1.84
HDAC8-216ENST00000470998 Q6ZRN7 208 aaPredicted RBP3.58□□□□□ -1.84
HDAC8-216ENST00000470998 Q6ZVQ6 151 aa3.58□□□□□ -1.84
HDAC8-216ENST00000470998 Q8N9P0 234 aaPredicted RBP3.58□□□□□ -1.84
HDAC8-216ENST00000470998 PKD1P98161 4303 aa3.58□□□□□ -1.84
HDAC8-216ENST00000470998 LRCOL1A6NCL2 159 aa3.57□□□□□ -1.84
HDAC8-216ENST00000470998 EPM2AB3EWF7 344 aa3.57□□□□□ -1.84
HDAC8-216ENST00000470998 COX7CP15954 63 aa3.57□□□□□ -1.84
HDAC8-216ENST00000470998 LINC01547P58512 204 aaPredicted RBP3.57□□□□□ -1.84
HDAC8-216ENST00000470998 UBE2BP63146 152 aa3.57□□□□□ -1.84
HDAC8-216ENST00000470998 HSPG2P98160 4391 aa3.57□□□□□ -1.84
HDAC8-216ENST00000470998 Q8N377 158 aa3.57□□□□□ -1.84
HDAC8-216ENST00000470998 SERP2Q8N6R1 65 aa3.57□□□□□ -1.84
HDAC8-216ENST00000470998 SVIPQ8NHG7 77 aa3.57□□□□□ -1.84
HDAC8-216ENST00000470998 Q9BRP9 147 aa3.57□□□□□ -1.84
HDAC8-216ENST00000470998 IGLV8-61A0A075B6I0 122 aa3.56□□□□□ -1.84
HDAC8-216ENST00000470998 IGKV3D-7A0A0C4DH55 119 aa3.56□□□□□ -1.84
HDAC8-216ENST00000470998 FAM168BA1KXE4 195 aa3.56□□□□□ -1.84
HDAC8-216ENST00000470998 KRTAP7-1Q8IUC3 87 aa3.56□□□□□ -1.84
HDAC8-216ENST00000470998 C3orf22Q8N5N4 141 aa3.56□□□□□ -1.84
HDAC8-216ENST00000470998 Q8NBF4 154 aa3.56□□□□□ -1.84
HDAC8-216ENST00000470998 APOBP04114 4563 aaKnown RBP3.56□□□□□ -1.84
HDAC8-216ENST00000470998 A0A087WTM6 91 aa3.55□□□□□ -1.84
HDAC8-216ENST00000470998 CRYGAP11844 174 aa3.55□□□□□ -1.84
HDAC8-216ENST00000470998 SPRR1BP22528 89 aa3.55□□□□□ -1.84
HDAC8-216ENST00000470998 RPL37AP61513 92 aaKnown RBP3.55□□□□□ -1.84
HDAC8-216ENST00000470998 NREPQ16612 68 aa3.55□□□□□ -1.84
HDAC8-216ENST00000470998 C1orf137Q5JT78 98 aa3.55□□□□□ -1.84
HDAC8-216ENST00000470998 FAM19A1Q7Z5A9 133 aa3.55□□□□□ -1.84
HDAC8-216ENST00000470998 SPRR4Q96PI1 79 aa3.55□□□□□ -1.84
HDAC8-216ENST00000470998 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.54□□□□□ -1.84
HDAC8-216ENST00000470998 IGKV2-24A0A0C4DH68 120 aa3.54□□□□□ -1.84
HDAC8-216ENST00000470998 HAMPP81172 84 aa3.54□□□□□ -1.84
HDAC8-216ENST00000470998 C9orf153Q5TBE3 101 aa3.54□□□□□ -1.84
HDAC8-216ENST00000470998 SPACA4Q8TDM5 124 aa3.54□□□□□ -1.84
HDAC8-216ENST00000470998 ZNF706Q9Y5V0 76 aaPredicted RBP3.54□□□□□ -1.84
HDAC8-216ENST00000470998 TRAV7A0A075B6U4 112 aa3.53□□□□□ -1.84
HDAC8-216ENST00000470998 BPY2O14599 106 aa3.53□□□□□ -1.84
HDAC8-216ENST00000470998 UBE2AP49459 152 aa3.53□□□□□ -1.84
HDAC8-216ENST00000470998 A0A1W2PNN7 141 aa3.52□□□□□ -1.85
HDAC8-216ENST00000470998 CCDC179H3BU77 68 aa3.52□□□□□ -1.85
HDAC8-216ENST00000470998 DEFB105AQ8NG35 78 aa3.52□□□□□ -1.85
HDAC8-216ENST00000470998 A0A087WVE0 104 aa3.51□□□□□ -1.85
HDAC8-216ENST00000470998 IGLV5-52A0A0A0MRZ9 124 aa3.51□□□□□ -1.85
HDAC8-216ENST00000470998 ERC2-IT1O76042 136 aa3.51□□□□□ -1.85
HDAC8-216ENST00000470998 HIGD2AQ9BW72 106 aa3.51□□□□□ -1.85
HDAC8-216ENST00000470998 IGKV2D-30A0A075B6S6 120 aa3.5□□□□□ -1.85
HDAC8-216ENST00000470998 A0A1W2PNM2 257 aa3.5□□□□□ -1.85
HDAC8-216ENST00000470998 NDUFC1O43677 76 aa3.5□□□□□ -1.85
HDAC8-216ENST00000470998 KRTAP10-1P60331 282 aa3.5□□□□□ -1.85
HDAC8-216ENST00000470998 TMEM258P61165 79 aa3.5□□□□□ -1.85
HDAC8-216ENST00000470998 PRLHP81277 87 aa3.5□□□□□ -1.85
HDAC8-216ENST00000470998 PHF5AQ7RTV0 110 aaKnown RBP3.5□□□□□ -1.85
HDAC8-216ENST00000470998 SMIM29Q86T20 159 aa3.5□□□□□ -1.85
HDAC8-216ENST00000470998 KRTAP13-1Q8IUC0 172 aa3.5□□□□□ -1.85
HDAC8-216ENST00000470998 ST20-AS1Q8NBB2 130 aa3.5□□□□□ -1.85
HDAC8-216ENST00000470998 PLAC8Q9NZF1 115 aa3.5□□□□□ -1.85
HDAC8-216ENST00000470998 J3KT08 172 aa3.49□□□□□ -1.85
HDAC8-216ENST00000470998 CHTF8P0CG12 524 aa3.49□□□□□ -1.85
HDAC8-216ENST00000470998 LINC00483Q53H64 154 aa3.49□□□□□ -1.85
HDAC8-216ENST00000470998 Q5VSD8 79 aa3.49□□□□□ -1.85
HDAC8-216ENST00000470998 IGKV4-1P06312 121 aa3.48□□□□□ -1.85
HDAC8-216ENST00000470998 KLKP1Q107X0 134 aa3.48□□□□□ -1.85
HDAC8-216ENST00000470998 IGFL1Q6UW32 110 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms