RNA–Protein interactions for RNA: ENST00000343958.8

FGD6-201, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FGD6, Length 9,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-201ENST00000343958 A0A087X002 238 aa5.13□□□□□ -1.59
FGD6-201ENST00000343958 NOTCH2NLQ7Z3S9 236 aa5.13□□□□□ -1.59
FGD6-201ENST00000343958 DCHS1Q96JQ0 3298 aa5.13□□□□□ -1.59
FGD6-201ENST00000343958 JMJD1CQ15652 2540 aa5.12□□□□□ -1.59
FGD6-201ENST00000343958 A0A1B0GU33 70 aa5.12□□□□□ -1.59
FGD6-201ENST00000343958 PRUNE2Q8WUY3 3088 aa5.12□□□□□ -1.59
FGD6-201ENST00000343958 Q6ZSA8 131 aa5.11□□□□□ -1.59
FGD6-201ENST00000343958 REV3LO60673 3130 aa5.1□□□□□ -1.59
FGD6-201ENST00000343958 USP9YO00507 2555 aaPredicted RBP5.09□□□□□ -1.59
FGD6-201ENST00000343958 CHD8Q9HCK8 2581 aa5.08□□□□□ -1.6
FGD6-201ENST00000343958 Q6ZR54 194 aa5.07□□□□□ -1.6
FGD6-201ENST00000343958 LAMA2P24043 3122 aaKnown RBP5.07□□□□□ -1.6
FGD6-201ENST00000343958 MYO9AB2RTY4 2548 aa5.06□□□□□ -1.6
FGD6-201ENST00000343958 FREM2Q5SZK8 3169 aa5.05□□□□□ -1.6
FGD6-201ENST00000343958 Q6ZRN7 208 aaPredicted RBP5.05□□□□□ -1.6
FGD6-201ENST00000343958 FASNP49327 2511 aaKnown RBP5.05□□□□□ -1.6
FGD6-201ENST00000343958 S4R3F8 94 aa5.05□□□□□ -1.6
FGD6-201ENST00000343958 Q5VSD8 79 aa5.02□□□□□ -1.61
FGD6-201ENST00000343958 DMAC1Q96GE9 116 aa5.02□□□□□ -1.61
FGD6-201ENST00000343958 LCE6AA0A183 80 aa5.02□□□□□ -1.61
FGD6-201ENST00000343958 TRIOO75962 3097 aa5.01□□□□□ -1.61
FGD6-201ENST00000343958 ACANP16112 2415 aa5.01□□□□□ -1.61
FGD6-201ENST00000343958 CSAG1Q6PB30 78 aa5.01□□□□□ -1.61
FGD6-201ENST00000343958 TLN2Q9Y4G6 2542 aa4.99□□□□□ -1.61
FGD6-201ENST00000343958 MYO18BQ8IUG5 2567 aa4.99□□□□□ -1.61
FGD6-201ENST00000343958 CR1P17927 2039 aa4.99□□□□□ -1.61
FGD6-201ENST00000343958 ASPMQ8IZT6 3477 aa4.99□□□□□ -1.61
FGD6-201ENST00000343958 ZFYVE26Q68DK2 2539 aa4.99□□□□□ -1.61
FGD6-201ENST00000343958 LRRK2Q5S007 2527 aa4.98□□□□□ -1.61
FGD6-201ENST00000343958 ANKRD17O75179 2603 aaKnown RBP4.98□□□□□ -1.61
FGD6-201ENST00000343958 KRTAP13-1Q8IUC0 172 aa4.98□□□□□ -1.61
FGD6-201ENST00000343958 SPATA8Q6RVD6 105 aa4.97□□□□□ -1.61
FGD6-201ENST00000343958 MTORP42345 2549 aa4.97□□□□□ -1.61
FGD6-201ENST00000343958 KRTAP13-2Q52LG2 175 aa4.97□□□□□ -1.61
FGD6-201ENST00000343958 VPS13AQ96RL7 3174 aa4.96□□□□□ -1.62
FGD6-201ENST00000343958 H1FX-AS1Q4G0G2 97 aa4.96□□□□□ -1.62
FGD6-201ENST00000343958 TRANK1O15050 2925 aa4.96□□□□□ -1.62
FGD6-201ENST00000343958 A0A0C4DFX4 3053 aa4.96□□□□□ -1.62
FGD6-201ENST00000343958 CAMK2N1Q7Z7J9 78 aa4.94□□□□□ -1.62
FGD6-201ENST00000343958 SPTBN4Q9H254 2564 aa4.93□□□□□ -1.62
FGD6-201ENST00000343958 A8MU10 97 aa4.93□□□□□ -1.62
FGD6-201ENST00000343958 WDFY3Q8IZQ1 3526 aa4.93□□□□□ -1.62
FGD6-201ENST00000343958 WDFY4Q6ZS81 3184 aa4.93□□□□□ -1.62
FGD6-201ENST00000343958 SETD2Q9BYW2 2564 aaPredicted RBP4.93□□□□□ -1.62
FGD6-201ENST00000343958 CFAP47Q6ZTR5 3102 aa4.92□□□□□ -1.62
FGD6-201ENST00000343958 HECTD1Q9ULT8 2610 aa4.92□□□□□ -1.62
FGD6-201ENST00000343958 F8P00451 2351 aa4.89□□□□□ -1.63
FGD6-201ENST00000343958 AKAP13Q12802 2813 aa4.89□□□□□ -1.63
FGD6-201ENST00000343958 RPL37P61927 97 aaKnown RBP4.88□□□□□ -1.63
FGD6-201ENST00000343958 M0R2T5 61 aa4.88□□□□□ -1.63
FGD6-201ENST00000343958 ASB16-AS1Q495Z4 193 aa4.88□□□□□ -1.63
FGD6-201ENST00000343958 ADM2Q7Z4H4 148 aa4.87□□□□□ -1.63
FGD6-201ENST00000343958 MGAQ8IWI9 3026 aa4.87□□□□□ -1.63
FGD6-201ENST00000343958 ROMO1P60602 79 aa4.86□□□□□ -1.63
FGD6-201ENST00000343958 R4GN34 69 aa4.86□□□□□ -1.63
FGD6-201ENST00000343958 CFAP54Q96N23 3096 aa4.85□□□□□ -1.63
FGD6-201ENST00000343958 A6NN06 94 aa4.85□□□□□ -1.63
FGD6-201ENST00000343958 M0QZ58 72 aa4.85□□□□□ -1.63
FGD6-201ENST00000343958 ZFHX4Q86UP3 3567 aa4.84□□□□□ -1.63
FGD6-201ENST00000343958 SEC61BP60468 96 aaKnown RBP4.83□□□□□ -1.64
FGD6-201ENST00000343958 EPG5Q9HCE0 2579 aa4.82□□□□□ -1.64
FGD6-201ENST00000343958 H3BS24 57 aa4.8□□□□□ -1.64
FGD6-201ENST00000343958 RPS29P62273 56 aaKnown RBP4.79□□□□□ -1.64
FGD6-201ENST00000343958 LUZP6Q538Z0 58 aa4.78□□□□□ -1.64
FGD6-201ENST00000343958 FLNAP21333 2647 aaKnown RBP4.78□□□□□ -1.64
FGD6-201ENST00000343958 ITPR3Q14573 2671 aa4.75□□□□□ -1.65
FGD6-201ENST00000343958 CSMD1Q96PZ7 3565 aa4.75□□□□□ -1.65
FGD6-201ENST00000343958 LOC400499M0QZD8 3231 aa4.74□□□□□ -1.65
FGD6-201ENST00000343958 KRTAP1-4P0C5Y4 121 aa4.74□□□□□ -1.65
FGD6-201ENST00000343958 PRRC2CQ9Y520 2896 aaKnown RBP4.73□□□□□ -1.65
FGD6-201ENST00000343958 LAMA1P25391 3075 aa4.73□□□□□ -1.65
FGD6-201ENST00000343958 KRTAP25-1Q3LHN0 102 aa4.72□□□□□ -1.65
FGD6-201ENST00000343958 A8MUU9 505 aa4.68□□□□□ -1.66
FGD6-201ENST00000343958 C20orf166-AS1Q96NR2 134 aa4.67□□□□□ -1.66
FGD6-201ENST00000343958 LAMA5O15230 3695 aa4.66□□□□□ -1.66
FGD6-201ENST00000343958 ZNF292O60281 2723 aa4.66□□□□□ -1.66
FGD6-201ENST00000343958 KRTAP16-1A8MUX0 517 aa4.65□□□□□ -1.66
FGD6-201ENST00000343958 USP24Q9UPU5 2620 aa4.65□□□□□ -1.66
FGD6-201ENST00000343958 MGAM2Q2M2H8 2515 aa4.63□□□□□ -1.67
FGD6-201ENST00000343958 FRYQ5TBA9 3013 aa4.63□□□□□ -1.67
FGD6-201ENST00000343958 ATRQ13535 2644 aa4.63□□□□□ -1.67
FGD6-201ENST00000343958 RELNP78509 3460 aa4.63□□□□□ -1.67
FGD6-201ENST00000343958 PLAC4Q8WY50 150 aa4.63□□□□□ -1.67
FGD6-201ENST00000343958 ATMQ13315 3056 aa4.61□□□□□ -1.67
FGD6-201ENST00000343958 XP32Q5T750 250 aa4.59□□□□□ -1.67
FGD6-201ENST00000343958 FRYLO94915 3013 aa4.59□□□□□ -1.68
FGD6-201ENST00000343958 DMDP11532 3685 aa4.58□□□□□ -1.68
FGD6-201ENST00000343958 C10orf95Q9H7T3 257 aa4.56□□□□□ -1.68
FGD6-201ENST00000343958 HELZ2Q9BYK8 2649 aaKnown RBP4.56□□□□□ -1.68
FGD6-201ENST00000343958 A0A0A0MQY5 61 aa4.56□□□□□ -1.68
FGD6-201ENST00000343958 FLNBO75369 2602 aaKnown RBP4.56□□□□□ -1.68
FGD6-201ENST00000343958 IGSF10Q6WRI0 2623 aa4.55□□□□□ -1.68
FGD6-201ENST00000343958 H0YAA0 97 aa4.55□□□□□ -1.68
FGD6-201ENST00000343958 KRTAP21-3Q3LHN1 58 aa4.55□□□□□ -1.68
FGD6-201ENST00000343958 ADGRG4Q8IZF6 3080 aa4.54□□□□□ -1.68
FGD6-201ENST00000343958 A0A1B0GVY2 172 aa4.54□□□□□ -1.68
FGD6-201ENST00000343958 DSPP15924 2871 aaKnown RBP4.53□□□□□ -1.68
FGD6-201ENST00000343958 KALRNO60229 2985 aa4.52□□□□□ -1.69
FGD6-201ENST00000343958 UNC79Q9P2D8 2635 aa4.52□□□□□ -1.69
FGD6-201ENST00000343958 NBEAL2Q6ZNJ1 2754 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms