RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Trbv17A0A140T8P8 114 aa13.47□□□□□ -0.25
Col17a1-202ENSMUST00000086923 Zic4Q61467 341 aa13.47□□□□□ -0.25
Col17a1-202ENSMUST00000086923 Dock6Q8VDR9 2080 aa13.47□□□□□ -0.25
Col17a1-202ENSMUST00000086923 Rbm3O89086 153 aaKnown RBP13.46□□□□□ -0.25
Col17a1-202ENSMUST00000086923 P01790 122 aa13.46□□□□□ -0.25
Col17a1-202ENSMUST00000086923 Igkv10-95A0A0G2JFY3 115 aa13.46□□□□□ -0.25
Col17a1-202ENSMUST00000086923 PcolceQ61398 468 aa13.46□□□□□ -0.25
Col17a1-202ENSMUST00000086923 GgnQ80WJ1 673 aa13.46□□□□□ -0.25
Col17a1-202ENSMUST00000086923 Gm17677B3GLJ5 116 aa13.46□□□□□ -0.25
Col17a1-202ENSMUST00000086923 Wdr81Q5ND34 1934 aa13.46□□□□□ -0.25
Col17a1-202ENSMUST00000086923 Zglp1Q1WG82 266 aa13.46□□□□□ -0.26
Col17a1-202ENSMUST00000086923 GalmQ8K157 342 aa13.46□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Lrcol1Q3URS3 161 aa13.45□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Brk1Q91VR8 75 aa13.45□□□□□ -0.26
Col17a1-202ENSMUST00000086923 HampQ9EQ21 83 aa13.45□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Ltbp4Q8K4G1 1666 aa13.45□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Alpk2Q91ZB0 2144 aa13.45□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Tmem88bQ3TYP4 173 aa13.45□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Zc3h3Q8CHP0 950 aa13.45□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Wisp1O54775 367 aa13.45□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Olfr317Q5NCD6 327 aa13.45□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Trav6-2Q5R1I4 113 aa13.45□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Arpc1aQ9R0Q6 370 aa13.45□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Greb1lB9EJV3 1913 aa13.45□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Trav14n-2A0A0G2JDF5 121 aa13.45□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Igkv4-53A0A0G2JFC6 119 aa13.45□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Igkv6-23A0A140T8N5 115 aa13.45□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Gm5129F6YHA9 99 aa13.45□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Foxf2O54743 446 aa13.45□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Hils1Q9QYL0 170 aa13.45□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Ighv1-18A0A0A6YXN4 117 aa13.44□□□□□ -0.26
Col17a1-202ENSMUST00000086923 BC035044E0CXF8 138 aa13.44□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Rbmy1bQ60990 380 aa13.44□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Reg4Q9D8G5 157 aa13.44□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Abca7Q91V24 2159 aa13.44□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Tcl1b2P56841 117 aa13.44□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Tmem258P61166 79 aa13.44□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Gm13199Q8C8E0 125 aa13.44□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Ltbp1Q8CG19 1712 aa13.44□□□□□ -0.26
Col17a1-202ENSMUST00000086923 D930048N14RikA2AA67 225 aa13.43□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Lsm4Q9QXA5 137 aaKnown RBP13.43□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Osr1Q9WVG7 266 aa13.43□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Plxnb2B2RXS4 1842 aa13.43□□□□□ -0.26
Col17a1-202ENSMUST00000086923 P01739 132 aa13.43□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Foxc1Q61572 553 aa13.43□□□□□ -0.26
Col17a1-202ENSMUST00000086923 GaptQ8CB93 157 aa13.43□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Pradc1Q9D9N8 188 aa13.43□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Trav21-dv12A0A075B6C4 109 aa13.43□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Igh-VJ558P01758 117 aa13.43□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Trav14-3A0A075B607 120 aa13.43□□□□□ -0.26
Col17a1-202ENSMUST00000086923 A0A1Y7VLU2 103 aa13.43□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Gm10604Q3V0X7 143 aa13.43□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Mustn1Q99JI1 82 aa13.43□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Dnajc13D4AFX7 2248 aaKnown RBP13.43□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Thy1P01831 162 aa13.43□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Ankrd39Q9D2X0 183 aa13.43□□□□□ -0.26
Col17a1-202ENSMUST00000086923 KcpQ3U492 1550 aa13.42□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Socs3O35718 225 aa13.42□□□□□ -0.26
Col17a1-202ENSMUST00000086923 SvipQ3UZP4 77 aa13.42□□□□□ -0.26
Col17a1-202ENSMUST00000086923 CrygcQ61597 174 aa13.42□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Trbv31A0A075B5J5 111 aa13.42□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Siglec15A7E1W8 342 aa13.42□□□□□ -0.26
Col17a1-202ENSMUST00000086923 RflnaQ7TS73 204 aa13.42□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Lhfpl1Q80SV1 220 aa13.42□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Shisa9Q9CZN4 424 aa13.42□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Gm17727E9Q4V7 109 aa13.42□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Gkn1Q9CR36 201 aa13.42□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Gm6871L7N248 545 aa13.42□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Dtx1Q61010 627 aa13.42□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Znf146Q8BQN6 292 aa13.42□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Ighv8-8A0A0A6YXQ0 119 aa13.41□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Ighv1-36A0A0A6YXT2 117 aa13.41□□□□□ -0.26
Col17a1-202ENSMUST00000086923 P04945 108 aa13.41□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Tpsab1Q02844 273 aa13.41□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Gm26558Q8BLW8 286 aa13.41□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Snrpd3P62320 126 aaKnown RBP13.41□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Gatd1Q8BFQ8 220 aa13.41□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Olfr748E9Q9Z0 307 aa13.4□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Tmem89Q9DA04 169 aa13.4□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Nhsl1Q8CAF4 1587 aa13.4□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Brca1P48754 1812 aa13.4□□□□□ -0.26
Col17a1-202ENSMUST00000086923 P01741 114 aa13.4□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Vwc2lQ505H4 222 aa13.4□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Rbfox3Q8BIF2 374 aa13.4□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Tmem190Q9D2E9 166 aa13.4□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Btaf1E9QAE3 1848 aa13.4□□□□□ -0.26
Col17a1-202ENSMUST00000086923 Trbv14A0A140T8L9 115 aa13.4□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Gm16381A0A1Y7VKT9 73 aa13.4□□□□□ -0.27
Col17a1-202ENSMUST00000086923 P01654 111 aa13.4□□□□□ -0.27
Col17a1-202ENSMUST00000086923 P01656 111 aa13.4□□□□□ -0.27
Col17a1-202ENSMUST00000086923 P03977 111 aa13.4□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Sod1P08228 154 aaKnown RBP13.4□□□□□ -0.27
Col17a1-202ENSMUST00000086923 CtsgP28293 261 aa13.4□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Gm9944Q8C559 102 aa13.4□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Gm10277Q6R5C6 214 aa13.39□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Rnf144bQ8BKD6 301 aa13.39□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Pear1Q8VIK5 1034 aa13.39□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Immp1lQ9CQU8 166 aa13.39□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Wdr31Q9JHB4 367 aa13.39□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Ramp3Q9WUP1 147 aa13.39□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 92.2 ms