Protein–RNA interactions for Protein: A0A0G2JDF5

Trav14n-2, T cell receptor alpha variable 14D-2 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-2A0A0G2JDF5 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Trav14n-2A0A0G2JDF5 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
Trav14n-2A0A0G2JDF5 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Trav14n-2A0A0G2JDF5 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Trav14n-2A0A0G2JDF5 Psd-208ENSMUST00000224556 2034 ntBASIC23.98■■□□□ 1.43
Trav14n-2A0A0G2JDF5 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trav14n-2A0A0G2JDF5 Gm25239-201ENSMUST00000174915 86 ntBASIC23.44■■□□□ 1.34
Trav14n-2A0A0G2JDF5 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Trav14n-2A0A0G2JDF5 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trav14n-2A0A0G2JDF5 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Trav14n-2A0A0G2JDF5 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Trav14n-2A0A0G2JDF5 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Trav14n-2A0A0G2JDF5 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trav14n-2A0A0G2JDF5 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trav14n-2A0A0G2JDF5 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trav14n-2A0A0G2JDF5 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trav14n-2A0A0G2JDF5 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Trav14n-2A0A0G2JDF5 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Trav14n-2A0A0G2JDF5 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22.09■■□□□ 1.13
Trav14n-2A0A0G2JDF5 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trav14n-2A0A0G2JDF5 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trav14n-2A0A0G2JDF5 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trav14n-2A0A0G2JDF5 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trav14n-2A0A0G2JDF5 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trav14n-2A0A0G2JDF5 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21.75■■□□□ 1.07
Trav14n-2A0A0G2JDF5 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Trav14n-2A0A0G2JDF5 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.7■■□□□ 1.06
Trav14n-2A0A0G2JDF5 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trav14n-2A0A0G2JDF5 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trav14n-2A0A0G2JDF5 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.62■■□□□ 1.05
Trav14n-2A0A0G2JDF5 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trav14n-2A0A0G2JDF5 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trav14n-2A0A0G2JDF5 Gm15042-201ENSMUST00000120212 883 ntBASIC21.47■■□□□ 1.03
Trav14n-2A0A0G2JDF5 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.43■■□□□ 1.02
Trav14n-2A0A0G2JDF5 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trav14n-2A0A0G2JDF5 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trav14n-2A0A0G2JDF5 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21.36■■□□□ 1.01
Trav14n-2A0A0G2JDF5 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trav14n-2A0A0G2JDF5 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trav14n-2A0A0G2JDF5 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trav14n-2A0A0G2JDF5 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.31■■□□□ 1
Trav14n-2A0A0G2JDF5 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Trav14n-2A0A0G2JDF5 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trav14n-2A0A0G2JDF5 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trav14n-2A0A0G2JDF5 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trav14n-2A0A0G2JDF5 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trav14n-2A0A0G2JDF5 Gm15045-201ENSMUST00000117359 883 ntBASIC21.15■□□□□ 0.98
Trav14n-2A0A0G2JDF5 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trav14n-2A0A0G2JDF5 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trav14n-2A0A0G2JDF5 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trav14n-2A0A0G2JDF5 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21.02■□□□□ 0.95
Trav14n-2A0A0G2JDF5 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trav14n-2A0A0G2JDF5 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trav14n-2A0A0G2JDF5 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trav14n-2A0A0G2JDF5 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Trav14n-2A0A0G2JDF5 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Trav14n-2A0A0G2JDF5 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trav14n-2A0A0G2JDF5 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Trav14n-2A0A0G2JDF5 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trav14n-2A0A0G2JDF5 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trav14n-2A0A0G2JDF5 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trav14n-2A0A0G2JDF5 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trav14n-2A0A0G2JDF5 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trav14n-2A0A0G2JDF5 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trav14n-2A0A0G2JDF5 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trav14n-2A0A0G2JDF5 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav14n-2A0A0G2JDF5 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.61■□□□□ 0.89
Trav14n-2A0A0G2JDF5 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trav14n-2A0A0G2JDF5 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Trav14n-2A0A0G2JDF5 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Trav14n-2A0A0G2JDF5 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav14n-2A0A0G2JDF5 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.54■□□□□ 0.88
Trav14n-2A0A0G2JDF5 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Trav14n-2A0A0G2JDF5 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav14n-2A0A0G2JDF5 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav14n-2A0A0G2JDF5 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav14n-2A0A0G2JDF5 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav14n-2A0A0G2JDF5 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trav14n-2A0A0G2JDF5 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav14n-2A0A0G2JDF5 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Trav14n-2A0A0G2JDF5 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.34■□□□□ 0.85
Trav14n-2A0A0G2JDF5 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trav14n-2A0A0G2JDF5 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trav14n-2A0A0G2JDF5 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav14n-2A0A0G2JDF5 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trav14n-2A0A0G2JDF5 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.26■□□□□ 0.83
Trav14n-2A0A0G2JDF5 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trav14n-2A0A0G2JDF5 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trav14n-2A0A0G2JDF5 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trav14n-2A0A0G2JDF5 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Trav14n-2A0A0G2JDF5 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav14n-2A0A0G2JDF5 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav14n-2A0A0G2JDF5 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trav14n-2A0A0G2JDF5 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trav14n-2A0A0G2JDF5 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trav14n-2A0A0G2JDF5 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Trav14n-2A0A0G2JDF5 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trav14n-2A0A0G2JDF5 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Trav14n-2A0A0G2JDF5 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav14n-2A0A0G2JDF5 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms