Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Gm25239-201ENSMUST00000174915 86 ntBASIC31.71■■■□□ 2.67
Igh-VJ558P01758 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Igh-VJ558P01758 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Igh-VJ558P01758 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.1■■■□□ 2.25
Igh-VJ558P01758 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
Igh-VJ558P01758 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Igh-VJ558P01758 Gm15042-201ENSMUST00000120212 883 ntBASIC28.23■■■□□ 2.11
Igh-VJ558P01758 Psd-208ENSMUST00000224556 2034 ntBASIC28.04■■■□□ 2.08
Igh-VJ558P01758 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Igh-VJ558P01758 Gm15045-201ENSMUST00000117359 883 ntBASIC27.74■■■□□ 2.03
Igh-VJ558P01758 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
Igh-VJ558P01758 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Igh-VJ558P01758 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.36■■□□□ 1.97
Igh-VJ558P01758 Gm24109-201ENSMUST00000175489 103 ntBASIC27.28■■□□□ 1.96
Igh-VJ558P01758 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Igh-VJ558P01758 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Igh-VJ558P01758 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Igh-VJ558P01758 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Igh-VJ558P01758 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Igh-VJ558P01758 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
Igh-VJ558P01758 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Igh-VJ558P01758 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Igh-VJ558P01758 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Igh-VJ558P01758 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Igh-VJ558P01758 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Igh-VJ558P01758 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
Igh-VJ558P01758 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.63■■□□□ 1.85
Igh-VJ558P01758 Gm23366-201ENSMUST00000175022 89 ntBASIC26.55■■□□□ 1.84
Igh-VJ558P01758 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Igh-VJ558P01758 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Igh-VJ558P01758 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Igh-VJ558P01758 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Igh-VJ558P01758 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.35■■□□□ 1.81
Igh-VJ558P01758 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Igh-VJ558P01758 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Igh-VJ558P01758 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Igh-VJ558P01758 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Igh-VJ558P01758 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Igh-VJ558P01758 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Igh-VJ558P01758 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
Igh-VJ558P01758 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25.91■■□□□ 1.74
Igh-VJ558P01758 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.88■■□□□ 1.73
Igh-VJ558P01758 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Igh-VJ558P01758 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.77■■□□□ 1.72
Igh-VJ558P01758 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Igh-VJ558P01758 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.68■■□□□ 1.7
Igh-VJ558P01758 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Igh-VJ558P01758 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Igh-VJ558P01758 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
Igh-VJ558P01758 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Igh-VJ558P01758 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Igh-VJ558P01758 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Igh-VJ558P01758 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Igh-VJ558P01758 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.16■■□□□ 1.62
Igh-VJ558P01758 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Igh-VJ558P01758 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.12■■□□□ 1.61
Igh-VJ558P01758 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Igh-VJ558P01758 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Igh-VJ558P01758 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Igh-VJ558P01758 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.02■■□□□ 1.6
Igh-VJ558P01758 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25■■□□□ 1.59
Igh-VJ558P01758 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
Igh-VJ558P01758 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25■■□□□ 1.59
Igh-VJ558P01758 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
Igh-VJ558P01758 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Igh-VJ558P01758 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Igh-VJ558P01758 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Igh-VJ558P01758 Gm25238-201ENSMUST00000174914 89 ntBASIC24.88■■□□□ 1.57
Igh-VJ558P01758 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Igh-VJ558P01758 Gm27325-201ENSMUST00000175467 74 ntBASIC24.86■■□□□ 1.57
Igh-VJ558P01758 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24.86■■□□□ 1.57
Igh-VJ558P01758 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24.81■■□□□ 1.56
Igh-VJ558P01758 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Igh-VJ558P01758 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24.75■■□□□ 1.55
Igh-VJ558P01758 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Igh-VJ558P01758 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
Igh-VJ558P01758 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
Igh-VJ558P01758 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Igh-VJ558P01758 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Igh-VJ558P01758 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Igh-VJ558P01758 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.62■■□□□ 1.53
Igh-VJ558P01758 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Igh-VJ558P01758 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Igh-VJ558P01758 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Igh-VJ558P01758 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Igh-VJ558P01758 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Igh-VJ558P01758 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Igh-VJ558P01758 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Igh-VJ558P01758 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Igh-VJ558P01758 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Igh-VJ558P01758 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
Igh-VJ558P01758 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Igh-VJ558P01758 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Igh-VJ558P01758 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24.37■■□□□ 1.49
Igh-VJ558P01758 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Igh-VJ558P01758 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Igh-VJ558P01758 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Igh-VJ558P01758 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC24.26■■□□□ 1.47
Igh-VJ558P01758 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Igh-VJ558P01758 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.24■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms