Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Gm25239-201ENSMUST00000174915 86 ntBASIC40.43■■■■■ 4.06
Zc3h3Q8CHP0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.71■■■■□ 3.63
Zc3h3Q8CHP0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.13■■■■□ 3.53
Zc3h3Q8CHP0 Gm24109-201ENSMUST00000175489 103 ntBASIC35.4■■■■□ 3.26
Zc3h3Q8CHP0 Gm15042-201ENSMUST00000120212 883 ntBASIC34.66■■■■□ 3.14
Zc3h3Q8CHP0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.26■■■■□ 3.08
Zc3h3Q8CHP0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.18■■■■□ 3.06
Zc3h3Q8CHP0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.02
Zc3h3Q8CHP0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
Zc3h3Q8CHP0 Gm15045-201ENSMUST00000117359 883 ntBASIC33.75■■■□□ 2.99
Zc3h3Q8CHP0 Gm23366-201ENSMUST00000175022 89 ntBASIC33.68■■■□□ 2.98
Zc3h3Q8CHP0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.26■■■□□ 2.91
Zc3h3Q8CHP0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.97■■■□□ 2.87
Zc3h3Q8CHP0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Zc3h3Q8CHP0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Zc3h3Q8CHP0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.83■■■□□ 2.85
Zc3h3Q8CHP0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Zc3h3Q8CHP0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Zc3h3Q8CHP0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.21■■■□□ 2.75
Zc3h3Q8CHP0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.19■■■□□ 2.74
Zc3h3Q8CHP0 Gm25238-201ENSMUST00000174914 89 ntBASIC32.13■■■□□ 2.73
Zc3h3Q8CHP0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Zc3h3Q8CHP0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.43■■■□□ 2.62
Zc3h3Q8CHP0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Zc3h3Q8CHP0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.6
Zc3h3Q8CHP0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
Zc3h3Q8CHP0 Gm25262-201ENSMUST00000174934 133 ntBASIC31.14■■■□□ 2.58
Zc3h3Q8CHP0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Zc3h3Q8CHP0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.99■■■□□ 2.55
Zc3h3Q8CHP0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Zc3h3Q8CHP0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.89■■■□□ 2.54
Zc3h3Q8CHP0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Zc3h3Q8CHP0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Zc3h3Q8CHP0 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC30.76■■■□□ 2.51
Zc3h3Q8CHP0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.68■■■□□ 2.5
Zc3h3Q8CHP0 Gm26115-201ENSMUST00000175605 87 ntBASIC30.66■■■□□ 2.5
Zc3h3Q8CHP0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.65■■■□□ 2.5
Zc3h3Q8CHP0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.63■■■□□ 2.49
Zc3h3Q8CHP0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Zc3h3Q8CHP0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.52■■■□□ 2.48
Zc3h3Q8CHP0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
Zc3h3Q8CHP0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.46■■■□□ 2.47
Zc3h3Q8CHP0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Zc3h3Q8CHP0 Gm8109-201ENSMUST00000194076 746 ntBASIC30.38■■■□□ 2.45
Zc3h3Q8CHP0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Zc3h3Q8CHP0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
Zc3h3Q8CHP0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Zc3h3Q8CHP0 Gm27325-201ENSMUST00000175467 74 ntBASIC30.25■■■□□ 2.43
Zc3h3Q8CHP0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.17■■■□□ 2.42
Zc3h3Q8CHP0 Rab21-202ENSMUST00000218831 843 ntBASIC30.15■■■□□ 2.42
Zc3h3Q8CHP0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
Zc3h3Q8CHP0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Zc3h3Q8CHP0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.07■■■□□ 2.41
Zc3h3Q8CHP0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Zc3h3Q8CHP0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Zc3h3Q8CHP0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Zc3h3Q8CHP0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Zc3h3Q8CHP0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.74■■■□□ 2.35
Zc3h3Q8CHP0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
Zc3h3Q8CHP0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.7■■■□□ 2.35
Zc3h3Q8CHP0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC29.69■■■□□ 2.34
Zc3h3Q8CHP0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Zc3h3Q8CHP0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Zc3h3Q8CHP0 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Zc3h3Q8CHP0 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Zc3h3Q8CHP0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Zc3h3Q8CHP0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.39■■■□□ 2.3
Zc3h3Q8CHP0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
Zc3h3Q8CHP0 Gm24804-201ENSMUST00000174982 85 ntBASIC29.3■■■□□ 2.28
Zc3h3Q8CHP0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
Zc3h3Q8CHP0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.26■■■□□ 2.27
Zc3h3Q8CHP0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
Zc3h3Q8CHP0 Gm17082-201ENSMUST00000166043 1091 ntBASIC29.22■■■□□ 2.27
Zc3h3Q8CHP0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.19■■■□□ 2.26
Zc3h3Q8CHP0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
Zc3h3Q8CHP0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.11■■■□□ 2.25
Zc3h3Q8CHP0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Zc3h3Q8CHP0 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC29■■■□□ 2.23
Zc3h3Q8CHP0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Zc3h3Q8CHP0 Gm27322-201ENSMUST00000184007 104 ntBASIC28.96■■■□□ 2.23
Zc3h3Q8CHP0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC28.91■■■□□ 2.22
Zc3h3Q8CHP0 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC28.91■■■□□ 2.22
Zc3h3Q8CHP0 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Zc3h3Q8CHP0 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.8■■■□□ 2.2
Zc3h3Q8CHP0 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
Zc3h3Q8CHP0 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
Zc3h3Q8CHP0 Zfp131-205ENSMUST00000223812 663 ntBASIC28.77■■■□□ 2.2
Zc3h3Q8CHP0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Zc3h3Q8CHP0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Zc3h3Q8CHP0 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.72■■■□□ 2.19
Zc3h3Q8CHP0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Zc3h3Q8CHP0 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Zc3h3Q8CHP0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.69■■■□□ 2.18
Zc3h3Q8CHP0 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC28.69■■■□□ 2.18
Zc3h3Q8CHP0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.69■■■□□ 2.18
Zc3h3Q8CHP0 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Zc3h3Q8CHP0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.67■■■□□ 2.18
Zc3h3Q8CHP0 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.64■■■□□ 2.18
Zc3h3Q8CHP0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC28.63■■■□□ 2.17
Zc3h3Q8CHP0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms