Protein–RNA interactions for Protein: E9Q4V7

Gm17727, Predicted gene, 17727, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17727E9Q4V7 Gm25239-201ENSMUST00000174915 86 ntBASIC28.98■■■□□ 2.23
Gm17727E9Q4V7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Gm17727E9Q4V7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Gm17727E9Q4V7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Gm17727E9Q4V7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Gm17727E9Q4V7 Gm15042-201ENSMUST00000120212 883 ntBASIC25.63■■□□□ 1.69
Gm17727E9Q4V7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
Gm17727E9Q4V7 Gm15045-201ENSMUST00000117359 883 ntBASIC25.07■■□□□ 1.6
Gm17727E9Q4V7 Gm24109-201ENSMUST00000175489 103 ntBASIC24.93■■□□□ 1.58
Gm17727E9Q4V7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Gm17727E9Q4V7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Gm17727E9Q4V7 Psd-208ENSMUST00000224556 2034 ntBASIC24.55■■□□□ 1.52
Gm17727E9Q4V7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Gm17727E9Q4V7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC24.38■■□□□ 1.49
Gm17727E9Q4V7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Gm17727E9Q4V7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Gm17727E9Q4V7 Gm23366-201ENSMUST00000175022 89 ntBASIC24.26■■□□□ 1.47
Gm17727E9Q4V7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Gm17727E9Q4V7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Gm17727E9Q4V7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Gm17727E9Q4V7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Gm17727E9Q4V7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Gm17727E9Q4V7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
Gm17727E9Q4V7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Gm17727E9Q4V7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Gm17727E9Q4V7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Gm17727E9Q4V7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Gm17727E9Q4V7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23.73■■□□□ 1.39
Gm17727E9Q4V7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Gm17727E9Q4V7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Gm17727E9Q4V7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC23.57■■□□□ 1.36
Gm17727E9Q4V7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Gm17727E9Q4V7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC23.47■■□□□ 1.35
Gm17727E9Q4V7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Gm17727E9Q4V7 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Gm17727E9Q4V7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Gm17727E9Q4V7 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Gm17727E9Q4V7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Gm17727E9Q4V7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC23.1■■□□□ 1.29
Gm17727E9Q4V7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Gm17727E9Q4V7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23.05■■□□□ 1.28
Gm17727E9Q4V7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Gm17727E9Q4V7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22.91■■□□□ 1.26
Gm17727E9Q4V7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Gm17727E9Q4V7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Gm17727E9Q4V7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.83■■□□□ 1.25
Gm17727E9Q4V7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Gm17727E9Q4V7 Gm25238-201ENSMUST00000174914 89 ntBASIC22.76■■□□□ 1.23
Gm17727E9Q4V7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Gm17727E9Q4V7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22.75■■□□□ 1.23
Gm17727E9Q4V7 Gm10524-201ENSMUST00000181931 1893 ntBASIC22.73■■□□□ 1.23
Gm17727E9Q4V7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Gm17727E9Q4V7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Gm17727E9Q4V7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Gm17727E9Q4V7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Gm17727E9Q4V7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Gm17727E9Q4V7 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Gm17727E9Q4V7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Gm17727E9Q4V7 Gm27325-201ENSMUST00000175467 74 ntBASIC22.5■■□□□ 1.19
Gm17727E9Q4V7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Gm17727E9Q4V7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC22.43■■□□□ 1.18
Gm17727E9Q4V7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22.43■■□□□ 1.18
Gm17727E9Q4V7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Gm17727E9Q4V7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC22.38■■□□□ 1.17
Gm17727E9Q4V7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Gm17727E9Q4V7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Gm17727E9Q4V7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC22.35■■□□□ 1.17
Gm17727E9Q4V7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
Gm17727E9Q4V7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Gm17727E9Q4V7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Gm17727E9Q4V7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Gm17727E9Q4V7 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Gm17727E9Q4V7 Gm42596-201ENSMUST00000196305 1958 ntBASIC22.23■■□□□ 1.15
Gm17727E9Q4V7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Gm17727E9Q4V7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Gm17727E9Q4V7 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Gm17727E9Q4V7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22.15■■□□□ 1.14
Gm17727E9Q4V7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Gm17727E9Q4V7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC22.1■■□□□ 1.13
Gm17727E9Q4V7 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Gm17727E9Q4V7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Gm17727E9Q4V7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.97■■□□□ 1.11
Gm17727E9Q4V7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.94■■□□□ 1.1
Gm17727E9Q4V7 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Gm17727E9Q4V7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Gm17727E9Q4V7 Rab21-202ENSMUST00000218831 843 ntBASIC21.9■■□□□ 1.1
Gm17727E9Q4V7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Gm17727E9Q4V7 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Gm17727E9Q4V7 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Gm17727E9Q4V7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Gm17727E9Q4V7 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Gm17727E9Q4V7 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Gm17727E9Q4V7 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Gm17727E9Q4V7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.81■■□□□ 1.08
Gm17727E9Q4V7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Gm17727E9Q4V7 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Gm17727E9Q4V7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.7■■□□□ 1.06
Gm17727E9Q4V7 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm17727E9Q4V7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Gm17727E9Q4V7 Gm25262-201ENSMUST00000174934 133 ntBASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms