Protein–RNA interactions for Protein: Q8CAF4

Nhsl1, NHS-like protein 1, mousemouse

Predictions only

Length 1,587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhsl1Q8CAF4 Gm25239-201ENSMUST00000174915 86 ntBASIC54.85■■■■■ 6.37
Nhsl1Q8CAF4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC51.36■■■■■ 5.81
Nhsl1Q8CAF4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC50.17■■■■■ 5.62
Nhsl1Q8CAF4 Gm24109-201ENSMUST00000175489 103 ntBASIC48.18■■■■■ 5.3
Nhsl1Q8CAF4 Gm15042-201ENSMUST00000120212 883 ntBASIC46.92■■■■■ 5.1
Nhsl1Q8CAF4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC46.41■■■■■ 5.02
Nhsl1Q8CAF4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC46.35■■■■■ 5.01
Nhsl1Q8CAF4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC46.22■■■■■ 4.99
Nhsl1Q8CAF4 Gm15045-201ENSMUST00000117359 883 ntBASIC45.87■■■■■ 4.93
Nhsl1Q8CAF4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC45.8■■■■■ 4.92
Nhsl1Q8CAF4 Gm23366-201ENSMUST00000175022 89 ntBASIC45.58■■■■■ 4.89
Nhsl1Q8CAF4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC45.24■■■■■ 4.83
Nhsl1Q8CAF4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC44.88■■■■■ 4.78
Nhsl1Q8CAF4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC44.81■■■■■ 4.76
Nhsl1Q8CAF4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC44.74■■■■■ 4.75
Nhsl1Q8CAF4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC44.69■■■■■ 4.74
Nhsl1Q8CAF4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC43.87■■■■■ 4.61
Nhsl1Q8CAF4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC43.71■■■■■ 4.59
Nhsl1Q8CAF4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC43.67■■■■■ 4.58
Nhsl1Q8CAF4 Gm25238-201ENSMUST00000174914 89 ntBASIC43.63■■■■■ 4.57
Nhsl1Q8CAF4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC43.58■■■■■ 4.57
Nhsl1Q8CAF4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC43.28■■■■■ 4.52
Nhsl1Q8CAF4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC42.78■■■■■ 4.44
Nhsl1Q8CAF4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC42.76■■■■■ 4.44
Nhsl1Q8CAF4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC42.49■■■■■ 4.39
Nhsl1Q8CAF4 Gm25262-201ENSMUST00000174934 133 ntBASIC42.18■■■■■ 4.34
Nhsl1Q8CAF4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC42.01■■■■■ 4.32
Nhsl1Q8CAF4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC41.88■■■■■ 4.29
Nhsl1Q8CAF4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC41.82■■■■■ 4.29
Nhsl1Q8CAF4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC41.79■■■■■ 4.28
Nhsl1Q8CAF4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC41.78■■■■■ 4.28
Nhsl1Q8CAF4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC41.76■■■■■ 4.27
Nhsl1Q8CAF4 Gm26115-201ENSMUST00000175605 87 ntBASIC41.61■■■■■ 4.25
Nhsl1Q8CAF4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC41.56■■■■■ 4.24
Nhsl1Q8CAF4 Gm8109-201ENSMUST00000194076 746 ntBASIC41.4■■■■■ 4.22
Nhsl1Q8CAF4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC41.33■■■■■ 4.21
Nhsl1Q8CAF4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC41.32■■■■■ 4.2
Nhsl1Q8CAF4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC41.24■■■■■ 4.19
Nhsl1Q8CAF4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC41.21■■■■■ 4.19
Nhsl1Q8CAF4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC41.2■■■■■ 4.19
Nhsl1Q8CAF4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC41.17■■■■■ 4.18
Nhsl1Q8CAF4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC41.1■■■■■ 4.17
Nhsl1Q8CAF4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC41.03■■■■■ 4.16
Nhsl1Q8CAF4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC40.93■■■■■ 4.14
Nhsl1Q8CAF4 Gm27325-201ENSMUST00000175467 74 ntBASIC40.86■■■■■ 4.13
Nhsl1Q8CAF4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC40.84■■■■■ 4.13
Nhsl1Q8CAF4 Rab21-202ENSMUST00000218831 843 ntBASIC40.82■■■■■ 4.13
Nhsl1Q8CAF4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC40.79■■■■■ 4.12
Nhsl1Q8CAF4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC40.78■■■■■ 4.12
Nhsl1Q8CAF4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC40.69■■■■■ 4.11
Nhsl1Q8CAF4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC40.68■■■■■ 4.1
Nhsl1Q8CAF4 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC40.63■■■■■ 4.09
Nhsl1Q8CAF4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC40.61■■■■■ 4.09
Nhsl1Q8CAF4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC40.48■■■■■ 4.07
Nhsl1Q8CAF4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC40.4■■■■■ 4.06
Nhsl1Q8CAF4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC40.4■■■■■ 4.06
Nhsl1Q8CAF4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC40.29■■■■■ 4.04
Nhsl1Q8CAF4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC40.07■■■■■ 4
Nhsl1Q8CAF4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC40.06■■■■■ 4
Nhsl1Q8CAF4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC40.02■■■■■ 4
Nhsl1Q8CAF4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC40.02■■■■■ 4
Nhsl1Q8CAF4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC39.93■■■■□ 3.98
Nhsl1Q8CAF4 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC39.89■■■■□ 3.98
Nhsl1Q8CAF4 Gm24804-201ENSMUST00000174982 85 ntBASIC39.89■■■■□ 3.98
Nhsl1Q8CAF4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC39.85■■■■□ 3.97
Nhsl1Q8CAF4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC39.84■■■■□ 3.97
Nhsl1Q8CAF4 Gm17082-201ENSMUST00000166043 1091 ntBASIC39.81■■■■□ 3.96
Nhsl1Q8CAF4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC39.71■■■■□ 3.95
Nhsl1Q8CAF4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC39.56■■■■□ 3.92
Nhsl1Q8CAF4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC39.47■■■■□ 3.91
Nhsl1Q8CAF4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC39.44■■■■□ 3.91
Nhsl1Q8CAF4 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC39.42■■■■□ 3.9
Nhsl1Q8CAF4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC39.38■■■■□ 3.9
Nhsl1Q8CAF4 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC39.37■■■■□ 3.89
Nhsl1Q8CAF4 Zfp131-205ENSMUST00000223812 663 ntBASIC39.37■■■■□ 3.89
Nhsl1Q8CAF4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC39.29■■■■□ 3.88
Nhsl1Q8CAF4 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC39.29■■■■□ 3.88
Nhsl1Q8CAF4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC39.28■■■■□ 3.88
Nhsl1Q8CAF4 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC39.26■■■■□ 3.88
Nhsl1Q8CAF4 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC39.21■■■■□ 3.87
Nhsl1Q8CAF4 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC39.11■■■■□ 3.85
Nhsl1Q8CAF4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC39.11■■■■□ 3.85
Nhsl1Q8CAF4 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC39.07■■■■□ 3.84
Nhsl1Q8CAF4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC39.06■■■■□ 3.84
Nhsl1Q8CAF4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC39.05■■■■□ 3.84
Nhsl1Q8CAF4 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC39.03■■■■□ 3.84
Nhsl1Q8CAF4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC39■■■■□ 3.83
Nhsl1Q8CAF4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC39■■■■□ 3.83
Nhsl1Q8CAF4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC38.99■■■■□ 3.83
Nhsl1Q8CAF4 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC38.98■■■■□ 3.83
Nhsl1Q8CAF4 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC38.97■■■■□ 3.83
Nhsl1Q8CAF4 Gm27322-201ENSMUST00000184007 104 ntBASIC38.94■■■■□ 3.82
Nhsl1Q8CAF4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC38.93■■■■□ 3.82
Nhsl1Q8CAF4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC38.89■■■■□ 3.82
Nhsl1Q8CAF4 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC38.87■■■■□ 3.81
Nhsl1Q8CAF4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC38.78■■■■□ 3.8
Nhsl1Q8CAF4 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC38.76■■■■□ 3.8
Nhsl1Q8CAF4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC38.74■■■■□ 3.79
Nhsl1Q8CAF4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC38.71■■■■□ 3.79
Nhsl1Q8CAF4 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC38.65■■■■□ 3.78
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms