Protein–RNA interactions for Protein: A0A0A6YXT2

Ighv1-36, Immunoglobulin heavy variable 1-36 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-36A0A0A6YXT2 Gm25239-201ENSMUST00000174915 86 ntBASIC28.91■■■□□ 2.22
Ighv1-36A0A0A6YXT2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Ighv1-36A0A0A6YXT2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Ighv1-36A0A0A6YXT2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
Ighv1-36A0A0A6YXT2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Ighv1-36A0A0A6YXT2 Psd-208ENSMUST00000224556 2034 ntBASIC26.27■■□□□ 1.8
Ighv1-36A0A0A6YXT2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ighv1-36A0A0A6YXT2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Ighv1-36A0A0A6YXT2 Gm15042-201ENSMUST00000120212 883 ntBASIC25.87■■□□□ 1.73
Ighv1-36A0A0A6YXT2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ighv1-36A0A0A6YXT2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ighv1-36A0A0A6YXT2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Ighv1-36A0A0A6YXT2 Gm15045-201ENSMUST00000117359 883 ntBASIC25.42■■□□□ 1.66
Ighv1-36A0A0A6YXT2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25.34■■□□□ 1.65
Ighv1-36A0A0A6YXT2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Ighv1-36A0A0A6YXT2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ighv1-36A0A0A6YXT2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ighv1-36A0A0A6YXT2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ighv1-36A0A0A6YXT2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Ighv1-36A0A0A6YXT2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ighv1-36A0A0A6YXT2 Gm24109-201ENSMUST00000175489 103 ntBASIC24.79■■□□□ 1.56
Ighv1-36A0A0A6YXT2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ighv1-36A0A0A6YXT2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ighv1-36A0A0A6YXT2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ighv1-36A0A0A6YXT2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ighv1-36A0A0A6YXT2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24.62■■□□□ 1.53
Ighv1-36A0A0A6YXT2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ighv1-36A0A0A6YXT2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ighv1-36A0A0A6YXT2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ighv1-36A0A0A6YXT2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.43■■□□□ 1.5
Ighv1-36A0A0A6YXT2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ighv1-36A0A0A6YXT2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Ighv1-36A0A0A6YXT2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ighv1-36A0A0A6YXT2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ighv1-36A0A0A6YXT2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ighv1-36A0A0A6YXT2 Gm23366-201ENSMUST00000175022 89 ntBASIC24.23■■□□□ 1.47
Ighv1-36A0A0A6YXT2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ighv1-36A0A0A6YXT2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
Ighv1-36A0A0A6YXT2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Ighv1-36A0A0A6YXT2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24.09■■□□□ 1.45
Ighv1-36A0A0A6YXT2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ighv1-36A0A0A6YXT2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Ighv1-36A0A0A6YXT2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Ighv1-36A0A0A6YXT2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23.99■■□□□ 1.43
Ighv1-36A0A0A6YXT2 Gm10524-201ENSMUST00000181931 1893 ntBASIC23.94■■□□□ 1.42
Ighv1-36A0A0A6YXT2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ighv1-36A0A0A6YXT2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ighv1-36A0A0A6YXT2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Ighv1-36A0A0A6YXT2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Ighv1-36A0A0A6YXT2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC23.75■■□□□ 1.39
Ighv1-36A0A0A6YXT2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ighv1-36A0A0A6YXT2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23.5■■□□□ 1.35
Ighv1-36A0A0A6YXT2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ighv1-36A0A0A6YXT2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ighv1-36A0A0A6YXT2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ighv1-36A0A0A6YXT2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23.35■■□□□ 1.33
Ighv1-36A0A0A6YXT2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ighv1-36A0A0A6YXT2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ighv1-36A0A0A6YXT2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ighv1-36A0A0A6YXT2 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.23■■□□□ 1.31
Ighv1-36A0A0A6YXT2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ighv1-36A0A0A6YXT2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ighv1-36A0A0A6YXT2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Ighv1-36A0A0A6YXT2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ighv1-36A0A0A6YXT2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ighv1-36A0A0A6YXT2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ighv1-36A0A0A6YXT2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Ighv1-36A0A0A6YXT2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ighv1-36A0A0A6YXT2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.08■■□□□ 1.29
Ighv1-36A0A0A6YXT2 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Ighv1-36A0A0A6YXT2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ighv1-36A0A0A6YXT2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ighv1-36A0A0A6YXT2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ighv1-36A0A0A6YXT2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ighv1-36A0A0A6YXT2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22.89■■□□□ 1.26
Ighv1-36A0A0A6YXT2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ighv1-36A0A0A6YXT2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC22.86■■□□□ 1.25
Ighv1-36A0A0A6YXT2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Ighv1-36A0A0A6YXT2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ighv1-36A0A0A6YXT2 Gm27325-201ENSMUST00000175467 74 ntBASIC22.8■■□□□ 1.24
Ighv1-36A0A0A6YXT2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ighv1-36A0A0A6YXT2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ighv1-36A0A0A6YXT2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ighv1-36A0A0A6YXT2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ighv1-36A0A0A6YXT2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ighv1-36A0A0A6YXT2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ighv1-36A0A0A6YXT2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ighv1-36A0A0A6YXT2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ighv1-36A0A0A6YXT2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Ighv1-36A0A0A6YXT2 Gm25238-201ENSMUST00000174914 89 ntBASIC22.62■■□□□ 1.21
Ighv1-36A0A0A6YXT2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ighv1-36A0A0A6YXT2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Ighv1-36A0A0A6YXT2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Ighv1-36A0A0A6YXT2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ighv1-36A0A0A6YXT2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ighv1-36A0A0A6YXT2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ighv1-36A0A0A6YXT2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22.52■■□□□ 1.2
Ighv1-36A0A0A6YXT2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.19
Ighv1-36A0A0A6YXT2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22.51■■□□□ 1.19
Ighv1-36A0A0A6YXT2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms