RNA–Protein interactions for RNA: ENST00000555520.1

LINC01578-206, Transcript of long intergenic non-protein coding RNA 1578, humanhuman

TSL 3 BASIC

Gene LINC01578, Length 977 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01578-206ENST00000555520 TGP01266 2768 aa-0.29□□□□□ -2.46
LINC01578-206ENST00000555520 NBPF19A0A087WUL8 3843 aa-0.3□□□□□ -2.46
LINC01578-206ENST00000555520 PDZD2O15018 2839 aa-0.3□□□□□ -2.46
LINC01578-206ENST00000555520 A0A1B0GU69 56 aa-0.3□□□□□ -2.46
LINC01578-206ENST00000555520 C6orf201Q7Z4U5 140 aa-0.3□□□□□ -2.46
LINC01578-206ENST00000555520 COL6A5A8TX70 2615 aa-0.3□□□□□ -2.46
LINC01578-206ENST00000555520 LAMA5O15230 3695 aa-0.31□□□□□ -2.46
LINC01578-206ENST00000555520 H3BQF6 201 aa-0.31□□□□□ -2.46
LINC01578-206ENST00000555520 UQCRHP07919 91 aa-0.31□□□□□ -2.46
LINC01578-206ENST00000555520 DEFB107AQ8IZN7 70 aa-0.31□□□□□ -2.46
LINC01578-206ENST00000555520 HECTD1Q9ULT8 2610 aa-0.31□□□□□ -2.46
LINC01578-206ENST00000555520 RAPGEF2Q9Y4G8 1499 aa-0.31□□□□□ -2.46
LINC01578-206ENST00000555520 USP9YO00507 2555 aaPredicted RBP-0.31□□□□□ -2.46
LINC01578-206ENST00000555520 TARBP1Q13395 1621 aaKnown RBP-0.31□□□□□ -2.46
LINC01578-206ENST00000555520 ITPR3Q14573 2671 aa-0.31□□□□□ -2.46
LINC01578-206ENST00000555520 SLIT1O75093 1534 aa-0.32□□□□□ -2.46
LINC01578-206ENST00000555520 KNDC1Q76NI1 1749 aa-0.32□□□□□ -2.46
LINC01578-206ENST00000555520 H0Y9P7 68 aa-0.32□□□□□ -2.46
LINC01578-206ENST00000555520 DSPP15924 2871 aaKnown RBP-0.32□□□□□ -2.46
LINC01578-206ENST00000555520 MARF1Q9Y4F3 1742 aaKnown RBP-0.33□□□□□ -2.46
LINC01578-206ENST00000555520 PRKDCP78527 4128 aaKnown RBP-0.33□□□□□ -2.46
LINC01578-206ENST00000555520 TRBV7-7A0A0K0K1E9 115 aa-0.33□□□□□ -2.46
LINC01578-206ENST00000555520 SYS1-DBNDD2H3BUS1 97 aa-0.33□□□□□ -2.46
LINC01578-206ENST00000555520 AKAP13Q12802 2813 aa-0.33□□□□□ -2.46
LINC01578-206ENST00000555520 FLNBO75369 2602 aaKnown RBP-0.34□□□□□ -2.46
LINC01578-206ENST00000555520 EDC4Q6P2E9 1401 aaKnown RBP-0.34□□□□□ -2.46
LINC01578-206ENST00000555520 USMG5Q96IX5 58 aa-0.34□□□□□ -2.46
LINC01578-206ENST00000555520 SPTA1P02549 2419 aa-0.34□□□□□ -2.46
LINC01578-206ENST00000555520 SHPRHQ149N8 1683 aa-0.34□□□□□ -2.46
LINC01578-206ENST00000555520 CHD8Q9HCK8 2581 aa-0.35□□□□□ -2.46
LINC01578-206ENST00000555520 ATRQ13535 2644 aa-0.35□□□□□ -2.47
LINC01578-206ENST00000555520 ARMS2P0C7Q2 107 aa-0.35□□□□□ -2.47
LINC01578-206ENST00000555520 LAMA2P24043 3122 aaKnown RBP-0.35□□□□□ -2.47
LINC01578-206ENST00000555520 MYO18BQ8IUG5 2567 aa-0.35□□□□□ -2.47
LINC01578-206ENST00000555520 DNAJC13O75165 2243 aa-0.36□□□□□ -2.47
LINC01578-206ENST00000555520 CSPG4Q6UVK1 2322 aa-0.36□□□□□ -2.47
LINC01578-206ENST00000555520 LRP1BQ9NZR2 4599 aa-0.36□□□□□ -2.47
LINC01578-206ENST00000555520 KRTAP19-7Q3SYF9 63 aa-0.36□□□□□ -2.47
LINC01578-206ENST00000555520 SNHG12Q9BXW3 62 aa-0.36□□□□□ -2.47
LINC01578-206ENST00000555520 MXRA5Q9NR99 2828 aa-0.36□□□□□ -2.47
LINC01578-206ENST00000555520 CNOT1A5YKK6 2376 aaKnown RBP-0.37□□□□□ -2.47
LINC01578-206ENST00000555520 NIPBLQ6KC79 2804 aaeCLIP-0.37□□□□□ -2.47
LINC01578-206ENST00000555520 FMN2Q9NZ56 1722 aa-0.38□□□□□ -2.47
LINC01578-206ENST00000555520 BIRC6Q9NR09 4857 aa-0.38□□□□□ -2.47
LINC01578-206ENST00000555520 LYSTQ99698 3801 aa-0.38□□□□□ -2.47
LINC01578-206ENST00000555520 FASNP49327 2511 aaKnown RBP-0.38□□□□□ -2.47
LINC01578-206ENST00000555520 ABCC2Q92887 1545 aa-0.38□□□□□ -2.47
LINC01578-206ENST00000555520 FLGP20930 4061 aaPredicted RBP-0.39□□□□□ -2.47
LINC01578-206ENST00000555520 S100A8P05109 93 aa-0.39□□□□□ -2.47
LINC01578-206ENST00000555520 COX8AP10176 69 aa-0.39□□□□□ -2.47
LINC01578-206ENST00000555520 KRTAP20-2Q3LI61 65 aa-0.39□□□□□ -2.47
LINC01578-206ENST00000555520 DEFB105AQ8NG35 78 aa-0.39□□□□□ -2.47
LINC01578-206ENST00000555520 USP9XQ93008 2570 aaPredicted RBP-0.39□□□□□ -2.47
LINC01578-206ENST00000555520 WDR87Q6ZQQ6 2873 aa-0.39□□□□□ -2.47
LINC01578-206ENST00000555520 URB1O60287 2271 aaKnown RBP-0.4□□□□□ -2.47
LINC01578-206ENST00000555520 KLK9Q2XQG4 91 aa-0.4□□□□□ -2.47
LINC01578-206ENST00000555520 KRTAP20-1Q3LI63 56 aa-0.4□□□□□ -2.47
LINC01578-206ENST00000555520 COL5A1-AS1Q5SY13 56 aa-0.4□□□□□ -2.47
LINC01578-206ENST00000555520 ANKRD26Q9UPS8 1709 aa-0.41□□□□□ -2.47
LINC01578-206ENST00000555520 PKHD1P08F94 4074 aa-0.41□□□□□ -2.47
LINC01578-206ENST00000555520 FAUP35544 74 aaKnown RBP-0.41□□□□□ -2.48
LINC01578-206ENST00000555520 PSENENQ9NZ42 101 aa-0.41□□□□□ -2.48
LINC01578-206ENST00000555520 CRIPTQ9P021 101 aa-0.41□□□□□ -2.48
LINC01578-206ENST00000555520 PRRC2CQ9Y520 2896 aaKnown RBP-0.41□□□□□ -2.48
LINC01578-206ENST00000555520 NKTRP30414 1462 aaKnown RBP-0.41□□□□□ -2.48
LINC01578-206ENST00000555520 PCNX1Q96RV3 2341 aa-0.42□□□□□ -2.48
LINC01578-206ENST00000555520 CELSR3Q9NYQ7 3312 aa-0.42□□□□□ -2.48
LINC01578-206ENST00000555520 MGAM2Q2M2H8 2515 aa-0.42□□□□□ -2.48
LINC01578-206ENST00000555520 SPG11Q96JI7 2443 aa-0.43□□□□□ -2.48
LINC01578-206ENST00000555520 TACC2O95359 2948 aa-0.43□□□□□ -2.48
LINC01578-206ENST00000555520 DNAH6Q9C0G6 4158 aa-0.43□□□□□ -2.48
LINC01578-206ENST00000555520 SPINK4O60575 86 aa-0.43□□□□□ -2.48
LINC01578-206ENST00000555520 MT4P47944 62 aa-0.43□□□□□ -2.48
LINC01578-206ENST00000555520 GNGT1P63211 74 aa-0.43□□□□□ -2.48
LINC01578-206ENST00000555520 SVEP1Q4LDE5 3571 aa-0.43□□□□□ -2.48
LINC01578-206ENST00000555520 DNAH3Q8TD57 4116 aa-0.44□□□□□ -2.48
LINC01578-206ENST00000555520 PKIAP61925 76 aa-0.44□□□□□ -2.48
LINC01578-206ENST00000555520 KRTAP19-8Q3LI54 63 aa-0.44□□□□□ -2.48
LINC01578-206ENST00000555520 FXYD6Q9H0Q3 95 aa-0.44□□□□□ -2.48
LINC01578-206ENST00000555520 PKHD1L1Q86WI1 4243 aa-0.44□□□□□ -2.48
LINC01578-206ENST00000555520 HMGN3Q15651 99 aa-0.45□□□□□ -2.48
LINC01578-206ENST00000555520 TEX15Q9BXT5 2789 aa-0.45□□□□□ -2.48
LINC01578-206ENST00000555520 EPRSP07814 1512 aaKnown RBP-0.45□□□□□ -2.48
LINC01578-206ENST00000555520 LAMA3Q16787 3333 aa-0.46□□□□□ -2.48
LINC01578-206ENST00000555520 CCDC141Q6ZP82 1450 aa-0.46□□□□□ -2.48
LINC01578-206ENST00000555520 TNRC18O15417 2968 aaPredicted RBP-0.46□□□□□ -2.48
LINC01578-206ENST00000555520 UQCRHLA0A096LP55 91 aa-0.46□□□□□ -2.48
LINC01578-206ENST00000555520 VPS13DQ5THJ4 4388 aa-0.46□□□□□ -2.48
LINC01578-206ENST00000555520 SAMD9Q5K651 1589 aa-0.46□□□□□ -2.48
LINC01578-206ENST00000555520 MUC17Q685J3 4493 aa-0.46□□□□□ -2.48
LINC01578-206ENST00000555520 ITPR2Q14571 2701 aa-0.46□□□□□ -2.48
LINC01578-206ENST00000555520 F8WEM9 126 aa-0.47□□□□□ -2.48
LINC01578-206ENST00000555520 ETDBQ3ZM63 59 aa-0.47□□□□□ -2.48
LINC01578-206ENST00000555520 AKAP9Q99996 3911 aa-0.47□□□□□ -2.49
LINC01578-206ENST00000555520 CUBNO60494 3623 aa-0.47□□□□□ -2.49
LINC01578-206ENST00000555520 DNAH2Q9P225 4427 aa-0.48□□□□□ -2.49
LINC01578-206ENST00000555520 ANKRD11Q6UB99 2663 aaPredicted RBP-0.48□□□□□ -2.49
LINC01578-206ENST00000555520 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.48□□□□□ -2.493e-6■□□□□ 10.8
LINC01578-206ENST00000555520 CPSF4LA6NMK7 179 aaKnown RBP-0.48□□□□□ -2.49
LINC01578-206ENST00000555520 HIGD1BQ9P298 99 aa-0.48□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms