RNA–Protein interactions for RNA: ENST00000555520.1

LINC01578-206, Transcript of long intergenic non-protein coding RNA 1578, humanhuman

TSL 3 BASIC

Gene LINC01578, Length 977 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01578-206ENST00000555520 CHIC1Q5VXU3 224 aa29.2■■■□□ 2.26
LINC01578-206ENST00000555520 AEBP2Q6ZN18 517 aaPredicted RBP29.18■■■□□ 2.26
LINC01578-206ENST00000555520 PHF23Q9BUL5 403 aaPredicted RBP25.85■■□□□ 1.73
LINC01578-206ENST00000555520 SENP3Q9H4L4 574 aaPredicted RBP24.47■■□□□ 1.51
LINC01578-206ENST00000555520 PLPPR3Q6T4P5 718 aa23.98■■□□□ 1.43
LINC01578-206ENST00000555520 FOXD1Q16676 465 aa22.7■■□□□ 1.22
LINC01578-206ENST00000555520 ADRA2BP18089 450 aa22.55■■□□□ 1.2
LINC01578-206ENST00000555520 PPP6R1Q9UPN7 881 aa22.52■■□□□ 1.2
LINC01578-206ENST00000555520 KCNA4P22459 653 aa21.73■■□□□ 1.07
LINC01578-206ENST00000555520 PIAS4Q8N2W9 510 aaPredicted RBP21.49■■□□□ 1.03
LINC01578-206ENST00000555520 POTEDQ86YR6 584 aa21.42■■□□□ 1.02
LINC01578-206ENST00000555520 PPP4R3CPQ6ZMV5 832 aa21.27■■□□□ 1
LINC01578-206ENST00000555520 EHMT2Q96KQ7 1210 aa21.04■□□□□ 0.96
LINC01578-206ENST00000555520 NCBP3Q53F19 620 aaKnown RBP20.83■□□□□ 0.93
LINC01578-206ENST00000555520 SLC4A1APQ9BWU0 796 aaKnown RBP20.75■□□□□ 0.91
LINC01578-206ENST00000555520 NPM3O75607 178 aaKnown RBP20.67■□□□□ 0.9
LINC01578-206ENST00000555520 CSRNP3Q8WYN3 585 aa20.58■□□□□ 0.89
LINC01578-206ENST00000555520 MSH5O43196 834 aa20.51■□□□□ 0.87
LINC01578-206ENST00000555520 CNKSR2Q8WXI2 1034 aa20.47■□□□□ 0.87
LINC01578-206ENST00000555520 SCAF1Q9H7N4 1312 aaKnown RBP20.4■□□□□ 0.86
LINC01578-206ENST00000555520 MAPK8IP2Q13387 824 aaPredicted RBP20.17■□□□□ 0.82
LINC01578-206ENST00000555520 ZBTB22O15209 634 aa20.1■□□□□ 0.81
LINC01578-206ENST00000555520 DNAJC5BQ9UF47 199 aa20.09■□□□□ 0.81
LINC01578-206ENST00000555520 RNF216Q9NWF9 866 aaPredicted RBP19.9■□□□□ 0.78
LINC01578-206ENST00000555520 DMRT2Q9Y5R5 561 aa19.73■□□□□ 0.75
LINC01578-206ENST00000555520 FOXD4L1Q9NU39 408 aa19.71■□□□□ 0.75
LINC01578-206ENST00000555520 HOXD11P31277 338 aaPredicted RBP19.67■□□□□ 0.74
LINC01578-206ENST00000555520 SLC4A2P04920 1241 aa19.39■□□□□ 0.69
LINC01578-206ENST00000555520 MYCNP04198 464 aaPredicted RBP19.03■□□□□ 0.64
LINC01578-206ENST00000555520 ATXN8OSP0DMR3 200 aa18.97■□□□□ 0.63
LINC01578-206ENST00000555520 DCAF8L1A6NGE4 600 aa18.6■□□□□ 0.57
LINC01578-206ENST00000555520 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.56■□□□□ 0.56
LINC01578-206ENST00000555520 ATF5Q9Y2D1 282 aaPredicted RBP18.56■□□□□ 0.56
LINC01578-206ENST00000555520 U3KPZ7 1027 aaPredicted RBP18.52■□□□□ 0.56
LINC01578-206ENST00000555520 FKBP8Q14318 412 aa18.43■□□□□ 0.54
LINC01578-206ENST00000555520 SAMD1Q6SPF0 538 aaPredicted RBP18.4■□□□□ 0.54
LINC01578-206ENST00000555520 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.39■□□□□ 0.53
LINC01578-206ENST00000555520 HNRNPUL2Q1KMD3 747 aaKnown RBP18.39■□□□□ 0.53
LINC01578-206ENST00000555520 RTN4Q9NQC3 1192 aaKnown RBP18.27■□□□□ 0.52
LINC01578-206ENST00000555520 AMER1Q5JTC6 1135 aaPredicted RBP18.2■□□□□ 0.5
LINC01578-206ENST00000555520 ZNF219Q9P2Y4 722 aaPredicted RBP18.08■□□□□ 0.48
LINC01578-206ENST00000555520 APLP2Q06481 763 aa17.96■□□□□ 0.47
LINC01578-206ENST00000555520 CACNB1Q02641 598 aaPredicted RBP17.88■□□□□ 0.45
LINC01578-206ENST00000555520 MKRN4PQ13434 485 aaPredicted RBP17.82■□□□□ 0.44
LINC01578-206ENST00000555520 RNF39Q9H2S5 420 aa17.75■□□□□ 0.43
LINC01578-206ENST00000555520 SPINK5Q9NQ38 1064 aaPredicted RBP17.74■□□□□ 0.43
LINC01578-206ENST00000555520 SLC24A1O60721 1099 aa17.73■□□□□ 0.43
LINC01578-206ENST00000555520 PROM2Q8N271 834 aa17.67■□□□□ 0.42
LINC01578-206ENST00000555520 SPDYE4A6NLX3 237 aa17.65■□□□□ 0.42
LINC01578-206ENST00000555520 TRHP20396 242 aaPredicted RBP17.61■□□□□ 0.41
LINC01578-206ENST00000555520 POLA2Q14181 598 aa17.56■□□□□ 0.4
LINC01578-206ENST00000555520 FBLN2P98095 1184 aa17.52■□□□□ 0.4
LINC01578-206ENST00000555520 C1QBPQ07021 282 aaKnown RBP17.51■□□□□ 0.39
LINC01578-206ENST00000555520 FBXO3Q9UK99 471 aa17.5■□□□□ 0.39
LINC01578-206ENST00000555520 CAPN15O75808 1086 aa17.48■□□□□ 0.39
LINC01578-206ENST00000555520 VASPP50552 380 aaPredicted RBP17.34■□□□□ 0.37
LINC01578-206ENST00000555520 ABCB7O75027 752 aa17.28■□□□□ 0.36
LINC01578-206ENST00000555520 ZBTB12Q9Y330 459 aaPredicted RBP17.28■□□□□ 0.36
LINC01578-206ENST00000555520 IFNLR1Q8IU57 520 aaPredicted RBP17.21■□□□□ 0.35
LINC01578-206ENST00000555520 DSG3P32926 999 aa17.16■□□□□ 0.34
LINC01578-206ENST00000555520 SSUH2Q9Y2M2 353 aa16.99■□□□□ 0.31
LINC01578-206ENST00000555520 PKD2Q13563 968 aa16.98■□□□□ 0.31
LINC01578-206ENST00000555520 OSCARQ8IYS5 282 aa16.96■□□□□ 0.31
LINC01578-206ENST00000555520 SPDYE2BA6NHP3 402 aa16.95■□□□□ 0.3
LINC01578-206ENST00000555520 SPDYE6P0CI01 402 aa16.95■□□□□ 0.3
LINC01578-206ENST00000555520 SPDYE2Q495Y8 402 aa16.95■□□□□ 0.3
LINC01578-206ENST00000555520 ZNF692Q9BU19 519 aaPredicted RBP16.94■□□□□ 0.3
LINC01578-206ENST00000555520 PLCB2Q00722 1185 aa16.84■□□□□ 0.29
LINC01578-206ENST00000555520 STAG3Q9UJ98 1225 aa16.84■□□□□ 0.29
LINC01578-206ENST00000555520 PABPN1Q86U42 306 aaKnown RBP eCLIP16.78■□□□□ 0.28
LINC01578-206ENST00000555520 SPOCK2Q92563 424 aa16.78■□□□□ 0.28
LINC01578-206ENST00000555520 KLHL34Q8N239 644 aa16.69■□□□□ 0.26
LINC01578-206ENST00000555520 DCAF8L2P0C7V8 631 aa16.62■□□□□ 0.25
LINC01578-206ENST00000555520 PLCD3Q8N3E9 789 aa16.62■□□□□ 0.25
LINC01578-206ENST00000555520 ECM2O94769 699 aaPredicted RBP16.58■□□□□ 0.24
LINC01578-206ENST00000555520 POTEHQ6S545 545 aa16.58■□□□□ 0.24
LINC01578-206ENST00000555520 MIER1Q8N108 512 aa16.58■□□□□ 0.24
LINC01578-206ENST00000555520 NPM1P06748 294 aaKnown RBP eCLIP16.52■□□□□ 0.24
LINC01578-206ENST00000555520 RGL2O15211 777 aa16.49■□□□□ 0.23
LINC01578-206ENST00000555520 HAP1P54257 671 aaPredicted RBP16.48■□□□□ 0.23
LINC01578-206ENST00000555520 BBXQ8WY36 941 aaPredicted RBP16.45■□□□□ 0.22
LINC01578-206ENST00000555520 ZBTB47Q9UFB7 747 aaPredicted RBP16.39■□□□□ 0.21
LINC01578-206ENST00000555520 VSIG10Q8N0Z9 540 aa16.34■□□□□ 0.21
LINC01578-206ENST00000555520 PLEKHG5O94827 1062 aa16.32■□□□□ 0.2
LINC01578-206ENST00000555520 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.31■□□□□ 0.2
LINC01578-206ENST00000555520 CIZ1Q9ULV3 898 aaPredicted RBP16.3■□□□□ 0.2
LINC01578-206ENST00000555520 NUBP1P53384 320 aa16.25■□□□□ 0.19
LINC01578-206ENST00000555520 PAXIP1Q6ZW49 1069 aaPredicted RBP16.25■□□□□ 0.19
LINC01578-206ENST00000555520 TRIM41Q8WV44 630 aa16.25■□□□□ 0.19
LINC01578-206ENST00000555520 AKT1S1Q96B36 256 aa16.24■□□□□ 0.19
LINC01578-206ENST00000555520 KDM2AQ9Y2K7 1162 aa16.24■□□□□ 0.19
LINC01578-206ENST00000555520 SPDYE1Q8NFV5 336 aaPredicted RBP16.21■□□□□ 0.19
LINC01578-206ENST00000555520 RNF25Q96BH1 459 aaPredicted RBP16.19■□□□□ 0.18
LINC01578-206ENST00000555520 RBM42Q9BTD8 480 aaKnown RBP16.19■□□□□ 0.18
LINC01578-206ENST00000555520 MNX1P50219 401 aaPredicted RBP16.17■□□□□ 0.18
LINC01578-206ENST00000555520 CFAP44Q96MT7 982 aa16.17■□□□□ 0.18
LINC01578-206ENST00000555520 CREBZFQ9NS37 354 aa16.16■□□□□ 0.18
LINC01578-206ENST00000555520 CHGAP10645 457 aaKnown RBP16.15■□□□□ 0.18
LINC01578-206ENST00000555520 GSE1Q14687 1217 aa16.14■□□□□ 0.17
LINC01578-206ENST00000555520 HS6ST3Q8IZP7 471 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms