RNA–Protein interactions for RNA: ENST00000437302.5

ITGB1-206, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-206ENST00000437302 HIGD1BQ9P298 99 aa1.55□□□□□ -2.16
ITGB1-206ENST00000437302 NDUFA12Q9UI09 145 aa1.55□□□□□ -2.16
ITGB1-206ENST00000437302 SPCS1Q9Y6A9 102 aa1.55□□□□□ -2.16
ITGB1-206ENST00000437302 LRBAP50851 2863 aa1.55□□□□□ -2.16
ITGB1-206ENST00000437302 ARFGEF3Q5TH69 2177 aa1.55□□□□□ -2.16
ITGB1-206ENST00000437302 KNTC1P50748 2209 aa1.55□□□□□ -2.16
ITGB1-206ENST00000437302 KNL1Q8NG31 2342 aa1.55□□□□□ -2.16
ITGB1-206ENST00000437302 ASPMQ8IZT6 3477 aa1.54□□□□□ -2.16
ITGB1-206ENST00000437302 CSMD1Q96PZ7 3565 aa1.54□□□□□ -2.16
ITGB1-206ENST00000437302 PRRC2CQ9Y520 2896 aaKnown RBP1.54□□□□□ -2.16
ITGB1-206ENST00000437302 LOC400499M0QZD8 3231 aa1.54□□□□□ -2.16
ITGB1-206ENST00000437302 TNCP24821 2201 aa1.54□□□□□ -2.16
ITGB1-206ENST00000437302 A0A1B0GUT8 65 aa1.54□□□□□ -2.16
ITGB1-206ENST00000437302 I3L2K1 104 aa1.54□□□□□ -2.16
ITGB1-206ENST00000437302 K7EIM0 57 aa1.54□□□□□ -2.16
ITGB1-206ENST00000437302 IGHV3-30P01768 117 aa1.54□□□□□ -2.16
ITGB1-206ENST00000437302 APELAP0DMC3 54 aa1.54□□□□□ -2.16
ITGB1-206ENST00000437302 IGHV3-30-5P0DP03 117 aa1.54□□□□□ -2.16
ITGB1-206ENST00000437302 PRB3Q04118 309 aaPredicted RBP1.54□□□□□ -2.16
ITGB1-206ENST00000437302 SPANXN1Q5VSR9 72 aa1.54□□□□□ -2.16
ITGB1-206ENST00000437302 TRGV9Q99603 122 aa1.54□□□□□ -2.16
ITGB1-206ENST00000437302 C20orf78Q9BR46 151 aa1.54□□□□□ -2.16
ITGB1-206ENST00000437302 WFDC10AQ9H1F0 79 aa1.54□□□□□ -2.16
ITGB1-206ENST00000437302 DCHS1Q96JQ0 3298 aa1.54□□□□□ -2.16
ITGB1-206ENST00000437302 ZFHX3Q15911 3703 aa1.54□□□□□ -2.16
ITGB1-206ENST00000437302 HEATR1Q9H583 2144 aaKnown RBP1.54□□□□□ -2.16
ITGB1-206ENST00000437302 IGKV3-7A0A075B6H7 116 aa1.53□□□□□ -2.16
ITGB1-206ENST00000437302 TRBV25-1A0A075B6N4 114 aa1.53□□□□□ -2.16
ITGB1-206ENST00000437302 IGKV2-40A0A087WW87 121 aaPredicted RBP1.53□□□□□ -2.16
ITGB1-206ENST00000437302 NUPR2A6NF83 97 aa1.53□□□□□ -2.16
ITGB1-206ENST00000437302 SNCGO76070 127 aa1.53□□□□□ -2.16
ITGB1-206ENST00000437302 IGKV2D-40P01614 121 aaPredicted RBP1.53□□□□□ -2.16
ITGB1-206ENST00000437302 COX6B1P14854 86 aa1.53□□□□□ -2.16
ITGB1-206ENST00000437302 PDE6GP18545 87 aa1.53□□□□□ -2.16
ITGB1-206ENST00000437302 RELNP78509 3460 aa1.53□□□□□ -2.16
ITGB1-206ENST00000437302 CFAP126Q5VTH2 177 aa1.53□□□□□ -2.16
ITGB1-206ENST00000437302 KRTAP5-7Q6L8G8 165 aa1.53□□□□□ -2.16
ITGB1-206ENST00000437302 SBSPONQ8IVN8 264 aa1.53□□□□□ -2.16
ITGB1-206ENST00000437302 MUC4Q99102 2169 aa1.53□□□□□ -2.16
ITGB1-206ENST00000437302 AMELXQ99217 191 aa1.53□□□□□ -2.16
ITGB1-206ENST00000437302 CNFNQ9BYD5 112 aa1.53□□□□□ -2.16
ITGB1-206ENST00000437302 PRO3102Q9H379 93 aa1.53□□□□□ -2.16
ITGB1-206ENST00000437302 TIMM8BQ9Y5J9 83 aaPredicted RBP1.53□□□□□ -2.16
ITGB1-206ENST00000437302 DNAJC13O75165 2243 aa1.52□□□□□ -2.17
ITGB1-206ENST00000437302 INTS1Q8N201 2190 aaKnown RBP1.52□□□□□ -2.17
ITGB1-206ENST00000437302 AKAP9Q99996 3911 aa1.52□□□□□ -2.17
ITGB1-206ENST00000437302 CELSR1Q9NYQ6 3014 aa1.52□□□□□ -2.17
ITGB1-206ENST00000437302 UBE2D1P51668 147 aa1.52□□□□□ -2.17
ITGB1-206ENST00000437302 EFNA4P52798 201 aa1.52□□□□□ -2.17
ITGB1-206ENST00000437302 UBE2D3P61077 147 aa1.52□□□□□ -2.17
ITGB1-206ENST00000437302 UBE2D2P62837 147 aa1.52□□□□□ -2.17
ITGB1-206ENST00000437302 ETDBQ3ZM63 59 aa1.52□□□□□ -2.17
ITGB1-206ENST00000437302 DEFB108BQ8NET1 73 aa1.52□□□□□ -2.17
ITGB1-206ENST00000437302 IFI27L1Q96BM0 104 aa1.52□□□□□ -2.17
ITGB1-206ENST00000437302 DMAC1Q96GE9 116 aa1.52□□□□□ -2.17
ITGB1-206ENST00000437302 TMEM141Q96I45 108 aa1.52□□□□□ -2.17
ITGB1-206ENST00000437302 MRPL35Q9NZE8 188 aaKnown RBP1.52□□□□□ -2.17
ITGB1-206ENST00000437302 C22orf24Q9Y442 160 aa1.52□□□□□ -2.17
ITGB1-206ENST00000437302 CNTRLQ7Z7A1 2325 aa1.52□□□□□ -2.17
ITGB1-206ENST00000437302 ATMQ13315 3056 aa1.51□□□□□ -2.17
ITGB1-206ENST00000437302 TRAV23DV6A0A075B6W5 121 aa1.51□□□□□ -2.17
ITGB1-206ENST00000437302 IGKV3D-7A0A0C4DH55 119 aa1.51□□□□□ -2.17
ITGB1-206ENST00000437302 IGKV3OR2-268A0A0C4DH90 116 aa1.51□□□□□ -2.17
ITGB1-206ENST00000437302 TRBV10-1A0A0K0K1A3 114 aa1.51□□□□□ -2.17
ITGB1-206ENST00000437302 CLPSL1A2RUU4 121 aa1.51□□□□□ -2.17
ITGB1-206ENST00000437302 RBAKDNA6NC62 111 aa1.51□□□□□ -2.17
ITGB1-206ENST00000437302 SMIM13P0DJ93 91 aa1.51□□□□□ -2.17
ITGB1-206ENST00000437302 FCER1GP30273 86 aa1.51□□□□□ -2.17
ITGB1-206ENST00000437302 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.51□□□□□ -2.17
ITGB1-206ENST00000437302 Q8N8P6 123 aa1.51□□□□□ -2.17
ITGB1-206ENST00000437302 FDCSPQ8NFU4 85 aa1.51□□□□□ -2.17
ITGB1-206ENST00000437302 ODF3Q96PU9 254 aa1.51□□□□□ -2.17
ITGB1-206ENST00000437302 DSCR8Q96T75 97 aa1.51□□□□□ -2.17
ITGB1-206ENST00000437302 CEP290O15078 2479 aa1.51□□□□□ -2.17
ITGB1-206ENST00000437302 MUC3AQ02505 3323 aa1.51□□□□□ -2.17
ITGB1-206ENST00000437302 ANK3Q12955 4377 aaKnown RBP1.5□□□□□ -2.17
ITGB1-206ENST00000437302 ABCA2Q9BZC7 2435 aa1.5□□□□□ -2.17
ITGB1-206ENST00000437302 TRIOBPQ9H2D6 2365 aa1.5□□□□□ -2.17
ITGB1-206ENST00000437302 LINC01549A6NIU2 74 aa1.5□□□□□ -2.17
ITGB1-206ENST00000437302 LYNX1G3V0Z9 82 aa1.5□□□□□ -2.17
ITGB1-206ENST00000437302 NDUFA3O95167 84 aa1.5□□□□□ -2.17
ITGB1-206ENST00000437302 LYNX1P0DP58 116 aa1.5□□□□□ -2.17
ITGB1-206ENST00000437302 DEFB1P60022 68 aa1.5□□□□□ -2.17
ITGB1-206ENST00000437302 NPC2P61916 151 aa1.5□□□□□ -2.17
ITGB1-206ENST00000437302 CCL8P80075 99 aa1.5□□□□□ -2.17
ITGB1-206ENST00000437302 KLK9Q2XQG4 91 aa1.5□□□□□ -2.17
ITGB1-206ENST00000437302 C9orf116Q5BN46 136 aaPredicted RBP1.5□□□□□ -2.17
ITGB1-206ENST00000437302 SFTA2Q6UW10 78 aa1.5□□□□□ -2.17
ITGB1-206ENST00000437302 NDUFA11Q86Y39 141 aa1.5□□□□□ -2.17
ITGB1-206ENST00000437302 ZGRF1Q86YA3 2104 aa1.5□□□□□ -2.17
ITGB1-206ENST00000437302 KRTAP13-1Q8IUC0 172 aa1.5□□□□□ -2.17
ITGB1-206ENST00000437302 Q8N6K4 173 aa1.5□□□□□ -2.17
ITGB1-206ENST00000437302 C10orf105Q8TEF2 133 aa1.5□□□□□ -2.17
ITGB1-206ENST00000437302 RPL39LQ96EH5 51 aaKnown RBP1.5□□□□□ -2.17
ITGB1-206ENST00000437302 LINC01600Q96MT4 127 aa1.5□□□□□ -2.17
ITGB1-206ENST00000437302 SMIM2Q9BVW6 85 aa1.5□□□□□ -2.17
ITGB1-206ENST00000437302 LAMA5O15230 3695 aa1.5□□□□□ -2.17
ITGB1-206ENST00000437302 MUC19Q7Z5P9 8384 aa1.49□□□□□ -2.17
ITGB1-206ENST00000437302 VPS13CQ709C8 3753 aa1.49□□□□□ -2.17
ITGB1-206ENST00000437302 ASH1LQ9NR48 2969 aaKnown RBP1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms