RNA–Protein interactions for RNA: ENST00000437302.5

ITGB1-206, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-206ENST00000437302 AEBP2Q6ZN18 517 aaPredicted RBP17.34■□□□□ 0.37
ITGB1-206ENST00000437302 CHIC1Q5VXU3 224 aa17.02■□□□□ 0.32
ITGB1-206ENST00000437302 PHF23Q9BUL5 403 aaPredicted RBP14.97□□□□□ -0.01
ITGB1-206ENST00000437302 SENP3Q9H4L4 574 aaPredicted RBP14.72□□□□□ -0.05
ITGB1-206ENST00000437302 PLPPR3Q6T4P5 718 aa13.85□□□□□ -0.19
ITGB1-206ENST00000437302 FOXD1Q16676 465 aa13.63□□□□□ -0.23
ITGB1-206ENST00000437302 PPP6R1Q9UPN7 881 aa13.17□□□□□ -0.3
ITGB1-206ENST00000437302 ADRA2BP18089 450 aa13.14□□□□□ -0.31
ITGB1-206ENST00000437302 PIAS4Q8N2W9 510 aaPredicted RBP12.85□□□□□ -0.35
ITGB1-206ENST00000437302 MSH5O43196 834 aa12.56□□□□□ -0.4
ITGB1-206ENST00000437302 PPP4R3CPQ6ZMV5 832 aa12.19□□□□□ -0.46
ITGB1-206ENST00000437302 SCAF1Q9H7N4 1312 aaKnown RBP12.06□□□□□ -0.48
ITGB1-206ENST00000437302 KCNA4P22459 653 aa11.98□□□□□ -0.49
ITGB1-206ENST00000437302 MAPK8IP2Q13387 824 aaPredicted RBP11.9□□□□□ -0.5
ITGB1-206ENST00000437302 NCBP3Q53F19 620 aaKnown RBP11.9□□□□□ -0.5
ITGB1-206ENST00000437302 CNKSR2Q8WXI2 1034 aa11.85□□□□□ -0.51
ITGB1-206ENST00000437302 DMRT2Q9Y5R5 561 aa11.76□□□□□ -0.53
ITGB1-206ENST00000437302 NPM3O75607 178 aaKnown RBP11.72□□□□□ -0.53
ITGB1-206ENST00000437302 RNF216Q9NWF9 866 aaPredicted RBP11.62□□□□□ -0.55
ITGB1-206ENST00000437302 HOXD11P31277 338 aaPredicted RBP11.57□□□□□ -0.56
ITGB1-206ENST00000437302 DNAJC5BQ9UF47 199 aa11.49□□□□□ -0.57
ITGB1-206ENST00000437302 SLC4A1APQ9BWU0 796 aaKnown RBP11.42□□□□□ -0.58
ITGB1-206ENST00000437302 POTEDQ86YR6 584 aa11.3□□□□□ -0.6
ITGB1-206ENST00000437302 DCAF8L1A6NGE4 600 aa11.15□□□□□ -0.62
ITGB1-206ENST00000437302 EHMT2Q96KQ7 1210 aa11.12□□□□□ -0.63
ITGB1-206ENST00000437302 SLC4A2P04920 1241 aa11.07□□□□□ -0.64
ITGB1-206ENST00000437302 ZBTB22O15209 634 aa11.04□□□□□ -0.64
ITGB1-206ENST00000437302 CSRNP3Q8WYN3 585 aa11.03□□□□□ -0.64
ITGB1-206ENST00000437302 FOXD4L1Q9NU39 408 aa11.02□□□□□ -0.65
ITGB1-206ENST00000437302 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.95□□□□□ -0.661e-12■□□□□ 10
ITGB1-206ENST00000437302 MYCNP04198 464 aaPredicted RBP10.84□□□□□ -0.67
ITGB1-206ENST00000437302 U3KPZ7 1027 aaPredicted RBP10.82□□□□□ -0.68
ITGB1-206ENST00000437302 RNF39Q9H2S5 420 aa10.79□□□□□ -0.68
ITGB1-206ENST00000437302 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.72□□□□□ -0.69
ITGB1-206ENST00000437302 HNRNPUL2Q1KMD3 747 aaKnown RBP10.72□□□□□ -0.69
ITGB1-206ENST00000437302 SAMD1Q6SPF0 538 aaPredicted RBP10.68□□□□□ -0.7
ITGB1-206ENST00000437302 ATXN8OSP0DMR3 200 aa10.67□□□□□ -0.7
ITGB1-206ENST00000437302 C1QBPQ07021 282 aaKnown RBP10.65□□□□□ -0.7
ITGB1-206ENST00000437302 APLP2Q06481 763 aa10.58□□□□□ -0.72
ITGB1-206ENST00000437302 ATF5Q9Y2D1 282 aaPredicted RBP10.53□□□□□ -0.72
ITGB1-206ENST00000437302 SPINK5Q9NQ38 1064 aaPredicted RBP10.47□□□□□ -0.73
ITGB1-206ENST00000437302 ZNF219Q9P2Y4 722 aaPredicted RBP10.43□□□□□ -0.74
ITGB1-206ENST00000437302 CAPN15O75808 1086 aa10.4□□□□□ -0.74
ITGB1-206ENST00000437302 CACNB1Q02641 598 aaPredicted RBP10.39□□□□□ -0.75
ITGB1-206ENST00000437302 TRHP20396 242 aaPredicted RBP10.37□□□□□ -0.75
ITGB1-206ENST00000437302 DSG3P32926 999 aa10.26□□□□□ -0.77
ITGB1-206ENST00000437302 POLA2Q14181 598 aa10.24□□□□□ -0.77
ITGB1-206ENST00000437302 ABCB7O75027 752 aa10.21□□□□□ -0.77
ITGB1-206ENST00000437302 ZBTB12Q9Y330 459 aaPredicted RBP10.12□□□□□ -0.79
ITGB1-206ENST00000437302 MKRN4PQ13434 485 aaPredicted RBP10.09□□□□□ -0.79
ITGB1-206ENST00000437302 FBLN2P98095 1184 aa10.07□□□□□ -0.8
ITGB1-206ENST00000437302 FKBP8Q14318 412 aa9.92□□□□□ -0.82
ITGB1-206ENST00000437302 OSCARQ8IYS5 282 aa9.89□□□□□ -0.83
ITGB1-206ENST00000437302 SPDYE4A6NLX3 237 aa9.87□□□□□ -0.83
ITGB1-206ENST00000437302 SPDYE2BA6NHP3 402 aa9.85□□□□□ -0.83
ITGB1-206ENST00000437302 SPDYE6P0CI01 402 aa9.85□□□□□ -0.83
ITGB1-206ENST00000437302 SPDYE2Q495Y8 402 aa9.85□□□□□ -0.83
ITGB1-206ENST00000437302 PROM2Q8N271 834 aa9.8□□□□□ -0.84
ITGB1-206ENST00000437302 SSUH2Q9Y2M2 353 aa9.8□□□□□ -0.84
ITGB1-206ENST00000437302 RBM42Q9BTD8 480 aaKnown RBP9.79□□□□□ -0.84
ITGB1-206ENST00000437302 ZNF692Q9BU19 519 aaPredicted RBP9.78□□□□□ -0.84
ITGB1-206ENST00000437302 AKT1S1Q96B36 256 aa9.68□□□□□ -0.86
ITGB1-206ENST00000437302 PABPN1Q86U42 306 aaKnown RBP eCLIP9.65□□□□□ -0.86
ITGB1-206ENST00000437302 FBXO3Q9UK99 471 aa9.6□□□□□ -0.87
ITGB1-206ENST00000437302 REM2Q8IYK8 340 aaPredicted RBP9.57□□□□□ -0.88
ITGB1-206ENST00000437302 STAG3Q9UJ98 1225 aa9.54□□□□□ -0.88
ITGB1-206ENST00000437302 SPDYE1Q8NFV5 336 aaPredicted RBP9.53□□□□□ -0.88
ITGB1-206ENST00000437302 PITPNM1O00562 1244 aa9.46□□□□□ -0.9
ITGB1-206ENST00000437302 VASPP50552 380 aaPredicted RBP9.46□□□□□ -0.9
ITGB1-206ENST00000437302 CLEC11AQ9Y240 323 aa9.42□□□□□ -0.9
ITGB1-206ENST00000437302 PRR29P0C7W0 189 aa9.38□□□□□ -0.91
ITGB1-206ENST00000437302 CHRDL2Q6WN34 429 aa9.34□□□□□ -0.91
ITGB1-206ENST00000437302 IFNLR1Q8IU57 520 aaPredicted RBP9.33□□□□□ -0.92
ITGB1-206ENST00000437302 MIER1Q8N108 512 aa9.33□□□□□ -0.92
ITGB1-206ENST00000437302 PLCD3Q8N3E9 789 aa9.33□□□□□ -0.92
ITGB1-206ENST00000437302 CREBZFQ9NS37 354 aa9.3□□□□□ -0.92
ITGB1-206ENST00000437302 PLEKHG5O94827 1062 aa9.29□□□□□ -0.92
ITGB1-206ENST00000437302 FXR2P51116 673 aaKnown RBP eCLIP9.29□□□□□ -0.922e-7■■□□□ 11.5
ITGB1-206ENST00000437302 ZBTB47Q9UFB7 747 aaPredicted RBP9.26□□□□□ -0.93
ITGB1-206ENST00000437302 MNX1P50219 401 aaPredicted RBP9.24□□□□□ -0.93
ITGB1-206ENST00000437302 KLHL34Q8N239 644 aa9.23□□□□□ -0.93
ITGB1-206ENST00000437302 PIP4P2Q8N4L2 257 aa9.23□□□□□ -0.93
ITGB1-206ENST00000437302 PRKAR2AP13861 404 aaKnown RBP9.2□□□□□ -0.94
ITGB1-206ENST00000437302 AMER1Q5JTC6 1135 aaPredicted RBP9.2□□□□□ -0.94
ITGB1-206ENST00000437302 CHADLQ6NUI6 762 aa9.2□□□□□ -0.94
ITGB1-206ENST00000437302 SPOCK2Q92563 424 aa9.2□□□□□ -0.94
ITGB1-206ENST00000437302 FARP1Q9Y4F1 1045 aaPredicted RBP9.16□□□□□ -0.94
ITGB1-206ENST00000437302 RTN4Q9NQC3 1192 aaKnown RBP9.15□□□□□ -0.94
ITGB1-206ENST00000437302 NPM1P06748 294 aaKnown RBP eCLIP9.14□□□□□ -0.95
ITGB1-206ENST00000437302 NUBP1P53384 320 aa9.13□□□□□ -0.95
ITGB1-206ENST00000437302 PKD2Q13563 968 aa9.06□□□□□ -0.96
ITGB1-206ENST00000437302 RASEFQ8IZ41 740 aa9.06□□□□□ -0.96
ITGB1-206ENST00000437302 GSE1Q14687 1217 aa9.04□□□□□ -0.96
ITGB1-206ENST00000437302 FAM212AQ96EL1 285 aa9.03□□□□□ -0.96
ITGB1-206ENST00000437302 DCAF8Q5TAQ9 597 aa9□□□□□ -0.97
ITGB1-206ENST00000437302 TRIM41Q8WV44 630 aa9□□□□□ -0.97
ITGB1-206ENST00000437302 CIZ1Q9ULV3 898 aaPredicted RBP9□□□□□ -0.97
ITGB1-206ENST00000437302 C19orf67A6NJJ6 358 aa8.97□□□□□ -0.97
ITGB1-206ENST00000437302 POTEHQ6S545 545 aa8.96□□□□□ -0.98
ITGB1-206ENST00000437302 PAK3O75914 559 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms