RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W DEF1P35732 738 aaKnown RBP3.36□□□□□ -1.87
MSH2YOL090W LAS1P36146 502 aaPredicted RBP3.36□□□□□ -1.87
MSH2YOL090W SIF2P38262 535 aa3.36□□□□□ -1.87
MSH2YOL090W NPR3P38742 1146 aa3.36□□□□□ -1.87
MSH2YOL090W ARF3P40994 183 aaRIP-Chip data3.36□□□□□ -1.87 RIP-Chip
MSH2YOL090W APL5Q08951 932 aaKnown RBP3.36□□□□□ -1.87
MSH2YOL090W THI21Q08975 551 aa3.36□□□□□ -1.87
MSH2YOL090W GET3Q12154 354 aaKnown RBP3.36□□□□□ -1.87
MSH2YOL090W DIF1O13577 133 aa3.35□□□□□ -1.87
MSH2YOL090W CAF20P12962 161 aaKnown RBP3.35□□□□□ -1.87
MSH2YOL090W LCB1P25045 558 aaKnown RBP3.35□□□□□ -1.87
MSH2YOL090W DAL80P26343 269 aa3.35□□□□□ -1.87
MSH2YOL090W CAP1P28495 268 aaKnown RBP3.35□□□□□ -1.87
MSH2YOL090W IME2P32581 645 aa3.35□□□□□ -1.87
MSH2YOL090W MDL2P33311 773 aa3.35□□□□□ -1.87
MSH2YOL090W UIP5P36137 443 aa3.35□□□□□ -1.87
MSH2YOL090W AKL1P38080 1108 aaKnown RBP3.35□□□□□ -1.87
MSH2YOL090W REI1P38344 393 aaPredicted RBP3.35□□□□□ -1.87
MSH2YOL090W FET5P43561 622 aa3.35□□□□□ -1.87
MSH2YOL090W OCA1P50946 238 aaPredicted RBP3.35□□□□□ -1.87
MSH2YOL090W ERV25P54837 211 aaKnown RBP3.35□□□□□ -1.87
MSH2YOL090W FCP1Q03254 732 aa3.35□□□□□ -1.87
MSH2YOL090W RSA3Q05942 220 aaKnown RBP3.35□□□□□ -1.87
MSH2YOL090W YLL058WQ12198 575 aa3.35□□□□□ -1.87
MSH2YOL090W SFI1Q12369 946 aa3.35□□□□□ -1.87
MSH2YOL090W YMR084WA2P2R3 262 aa3.35□□□□□ -1.87
MSH2YOL090W NOT3P06102 836 aaKnown RBP3.35□□□□□ -1.87
MSH2YOL090W TPK1P06244 397 aa3.35□□□□□ -1.87
MSH2YOL090W KAR3P17119 729 aa3.35□□□□□ -1.87
MSH2YOL090W RIT1P23796 513 aa3.35□□□□□ -1.87
MSH2YOL090W FLR1P38124 548 aa3.35□□□□□ -1.87
MSH2YOL090W RFC1P38630 861 aaKnown RBP3.35□□□□□ -1.87
MSH2YOL090W GDI1P39958 451 aaKnown RBP3.35□□□□□ -1.87
MSH2YOL090W UBP7P40453 1071 aa3.35□□□□□ -1.87
MSH2YOL090W NEO1P40527 1151 aa3.35□□□□□ -1.87
MSH2YOL090W BRE2P43132 505 aa3.35□□□□□ -1.87
MSH2YOL090W ALT1P52893 592 aa3.35□□□□□ -1.87
MSH2YOL090W YGR045CP53229 120 aa3.35□□□□□ -1.87
MSH2YOL090W NNF2P53253 936 aa3.35□□□□□ -1.87
MSH2YOL090W NOG2P53742 486 aaKnown RBP3.35□□□□□ -1.87
MSH2YOL090W ADE12P80210 433 aaKnown RBP3.35□□□□□ -1.87
MSH2YOL090W CIK1Q01649 594 aa3.35□□□□□ -1.87
MSH2YOL090W RCR2Q03446 210 aaKnown RBP3.35□□□□□ -1.87
MSH2YOL090W DPB4Q04603 196 aaKnown RBP3.35□□□□□ -1.87
MSH2YOL090W GTB1Q04924 702 aa3.35□□□□□ -1.87
MSH2YOL090W RSF1Q05043 376 aa3.35□□□□□ -1.87
MSH2YOL090W STP4Q07351 490 aa3.35□□□□□ -1.87
MSH2YOL090W CTI6Q08923 506 aa3.35□□□□□ -1.87
MSH2YOL090W SKS1Q12505 502 aa3.35□□□□□ -1.87
MSH2YOL090W MIS1P09440 975 aaKnown RBP3.34□□□□□ -1.87
MSH2YOL090W IME1P21190 360 aa3.34□□□□□ -1.87
MSH2YOL090W APN1P22936 367 aa3.34□□□□□ -1.87
MSH2YOL090W EFT1P32324 842 aaKnown RBP3.34□□□□□ -1.87
MSH2YOL090W STB6P36085 766 aa3.34□□□□□ -1.87
MSH2YOL090W SRO77P38163 1010 aa3.34□□□□□ -1.87
MSH2YOL090W YJR061WP40355 935 aa3.34□□□□□ -1.87
MSH2YOL090W YIL161WP40449 235 aaKnown RBP3.34□□□□□ -1.87
MSH2YOL090W EFM4P40516 257 aa3.34□□□□□ -1.87
MSH2YOL090W GCV1P48015 400 aa3.34□□□□□ -1.87
MSH2YOL090W TOF1P53840 1238 aa3.34□□□□□ -1.87
MSH2YOL090W BNI5P53890 448 aaKnown RBP3.34□□□□□ -1.87
MSH2YOL090W ACS1Q01574 713 aa3.34□□□□□ -1.87
MSH2YOL090W GCR2Q01722 534 aa3.34□□□□□ -1.87
MSH2YOL090W MAK10Q02197 733 aa3.34□□□□□ -1.87
MSH2YOL090W GIS4Q04233 774 aa3.34□□□□□ -1.87
MSH2YOL090W CFT2Q12102 859 aaPredicted RBP3.34□□□□□ -1.87
MSH2YOL090W NMD4Q12129 218 aa3.34□□□□□ -1.87
MSH2YOL090W PSY3Q12318 242 aa3.34□□□□□ -1.87
MSH2YOL090W TUB2P02557 457 aaKnown RBP3.34□□□□□ -1.87
MSH2YOL090W PDC5P16467 563 aaKnown RBP3.34□□□□□ -1.87
MSH2YOL090W YCK1P23291 538 aa3.34□□□□□ -1.87
MSH2YOL090W DGR2P32330 852 aa3.34□□□□□ -1.87
MSH2YOL090W MRP20P32387 263 aa3.34□□□□□ -1.87
MSH2YOL090W LYS9P38999 446 aa3.34□□□□□ -1.87
MSH2YOL090W UME6P39001 836 aa3.34□□□□□ -1.87
MSH2YOL090W PRM2P40534 656 aa3.34□□□□□ -1.87
MSH2YOL090W THI6P41835 540 aa3.34□□□□□ -1.87
MSH2YOL090W HST1P53685 503 aa3.34□□□□□ -1.87
MSH2YOL090W PHO92Q06390 306 aa3.34□□□□□ -1.87
MSH2YOL090W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.34□□□□□ -1.87not detected
MSH2YOL090W ENT4Q07872 247 aa3.34□□□□□ -1.87
MSH2YOL090W RPS17AP02407 136 aaKnown RBP3.33□□□□□ -1.88
MSH2YOL090W RPB2P08518 1224 aaKnown RBP3.33□□□□□ -1.88
MSH2YOL090W RPS17BP14127 136 aaKnown RBP3.33□□□□□ -1.88
MSH2YOL090W PET123P17558 318 aa3.33□□□□□ -1.88
MSH2YOL090W PRP22P24384 1145 aaKnown RBP3.33□□□□□ -1.88
MSH2YOL090W IMG2P25642 146 aaPredicted RBP3.33□□□□□ -1.88
MSH2YOL090W MGM1P32266 881 aa3.33□□□□□ -1.88
MSH2YOL090W PCH2P38126 564 aa3.33□□□□□ -1.88
MSH2YOL090W UBP13P38187 747 aa3.33□□□□□ -1.88
MSH2YOL090W ATG14P38270 344 aa3.33□□□□□ -1.88
MSH2YOL090W VMA13P41807 478 aaKnown RBP3.33□□□□□ -1.88
MSH2YOL090W IMA1P53051 589 aa3.33□□□□□ -1.88
MSH2YOL090W SCW11P53189 542 aa3.33□□□□□ -1.88
MSH2YOL090W GYL1Q04322 720 aa3.33□□□□□ -1.88
MSH2YOL090W RCL1Q08096 367 aaPredicted RBP3.33□□□□□ -1.88
MSH2YOL090W APC5Q08683 685 aa3.33□□□□□ -1.88
MSH2YOL090W MRN1Q08925 612 aaKnown RBP RIP-Chip data3.33□□□□□ -1.88not detected
MSH2YOL090W BMS1Q08965 1183 aaKnown RBP3.33□□□□□ -1.88
MSH2YOL090W YOR022CQ12204 715 aa3.33□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms