RNA–Protein interactions for RNA: YML001W

YPT7, Transcript of Rab family GTPase, yeast

Gene YPT7, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT7	YML001W	VPS60	Q03390	229 aa		4.05	□□□□□ -1.76
YPT7	YML001W	RRB1	Q04225	511 aa	Known RBP	4.05	□□□□□ -1.76
YPT7	YML001W	GFD1	Q04839	188 aa	Known RBP	4.05	□□□□□ -1.76
YPT7	YML001W	YCG1	Q06680	1035 aa		4.05	□□□□□ -1.76
YPT7	YML001W	YPL216W	Q08964	1102 aa		4.05	□□□□□ -1.76
YPT7	YML001W	HRP1	Q99383	534 aa	Known RBP	4.05	□□□□□ -1.76
YPT7	YML001W	MET6	P05694	767 aa	Known RBP	4.04	□□□□□ -1.76
YPT7	YML001W	PYC1	P11154	1178 aa	Known RBP	4.04	□□□□□ -1.76
YPT7	YML001W	PHO8	P11491	566 aa		4.04	□□□□□ -1.76
YPT7	YML001W	GFA1	P14742	717 aa	Known RBP	4.04	□□□□□ -1.76
YPT7	YML001W	GSY1	P23337	708 aa		4.04	□□□□□ -1.76
YPT7	YML001W	VBA3	P25594	458 aa		4.04	□□□□□ -1.76
YPT7	YML001W	RPS0A	P32905	252 aa	Known RBP	4.04	□□□□□ -1.76
YPT7	YML001W	LTV1	P34078	463 aa		4.04	□□□□□ -1.76
YPT7	YML001W	BMH2	P34730	273 aa	Known RBP	4.04	□□□□□ -1.76
YPT7	YML001W	RPC25	P35718	212 aa		4.04	□□□□□ -1.76
YPT7	YML001W	CUE2	P36075	443 aa	Known RBP	4.04	□□□□□ -1.76
YPT7	YML001W	YKR018C	P36114	725 aa		4.04	□□□□□ -1.76
YPT7	YML001W	YKR051W	P36142	418 aa		4.04	□□□□□ -1.76
YPT7	YML001W	PCH2	P38126	564 aa		4.04	□□□□□ -1.76
YPT7	YML001W	TDP1	P38319	544 aa		4.04	□□□□□ -1.76
YPT7	YML001W	CAJ1	P39101	391 aa		4.04	□□□□□ -1.76
YPT7	YML001W	SAP1	P39955	897 aa	Known RBP	4.04	□□□□□ -1.76
YPT7	YML001W	VID27	P40157	782 aa		4.04	□□□□□ -1.76
YPT7	YML001W	TFG2	P41896	400 aa	Predicted RBP	4.04	□□□□□ -1.76
YPT7	YML001W	NPY1	P53164	384 aa		4.04	□□□□□ -1.76
YPT7	YML001W	VPS75	P53853	264 aa		4.04	□□□□□ -1.76
YPT7	YML001W	ORC4	P54791	529 aa		4.04	□□□□□ -1.76
YPT7	YML001W	CTK1	Q03957	528 aa	Known RBP	4.04	□□□□□ -1.76
YPT7	YML001W	YDR341C	Q05506	607 aa	Known RBP	4.04	□□□□□ -1.76
YPT7	YML001W	RGC1	Q06108	1083 aa	Known RBP	4.04	□□□□□ -1.76
YPT7	YML001W	DCS2	Q12123	353 aa		4.04	□□□□□ -1.76
YPT7	YML001W	TAF3	Q12297	353 aa		4.04	□□□□□ -1.76
YPT7	YML001W	HIF1	Q12373	385 aa		4.04	□□□□□ -1.76
YPT7	YML001W	YKL033W-A	Q86ZR7	236 aa		4.04	□□□□□ -1.76
YPT7	YML001W	QCR6	P00127	147 aa		4.03	□□□□□ -1.76
YPT7	YML001W	HIS4	P00815	799 aa	Known RBP	4.03	□□□□□ -1.76
YPT7	YML001W	SRD1	P09007	221 aa		4.03	□□□□□ -1.76
YPT7	YML001W	ERG6	P25087	383 aa	Known RBP	4.03	□□□□□ -1.76
YPT7	YML001W	PSO2	P30620	661 aa		4.03	□□□□□ -1.76
YPT7	YML001W	PRO3	P32263	286 aa	Known RBP	4.03	□□□□□ -1.76
YPT7	YML001W	HOG1	P32485	435 aa		4.03	□□□□□ -1.76
YPT7	YML001W	TRZ1	P36159	838 aa	Predicted RBP	4.03	□□□□□ -1.76
YPT7	YML001W	ADE17	P38009	592 aa	Known RBP	4.03	□□□□□ -1.76
YPT7	YML001W	MAL31	P38156	614 aa		4.03	□□□□□ -1.76
YPT7	YML001W	RFT1	P38206	574 aa	Predicted RBP	4.03	□□□□□ -1.76
YPT7	YML001W	RXT2	P38255	430 aa		4.03	□□□□□ -1.76
YPT7	YML001W	TCD1	P38756	429 aa		4.03	□□□□□ -1.76
YPT7	YML001W	SPL2	P38839	148 aa		4.03	□□□□□ -1.76
YPT7	YML001W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
YPT7	YML001W	REV7	P38927	245 aa		4.03	□□□□□ -1.76
YPT7	YML001W	VPS8	P39702	1274 aa		4.03	□□□□□ -1.76
YPT7	YML001W	NUP60	P39705	539 aa		4.03	□□□□□ -1.76
YPT7	YML001W	RPT2	P40327	437 aa	Known RBP	4.03	□□□□□ -1.76
YPT7	YML001W	PCI8	P40512	444 aa		4.03	□□□□□ -1.76
YPT7	YML001W	CCT7	P42943	550 aa	Known RBP	4.03	□□□□□ -1.76
YPT7	YML001W	PAN2	P53010	1115 aa	Predicted RBP	4.03	□□□□□ -1.76
YPT7	YML001W	FHN1	P53279	174 aa		4.03	□□□□□ -1.76
YPT7	YML001W	UGO1	Q03327	502 aa		4.03	□□□□□ -1.76
YPT7	YML001W	SYF1	Q04048	859 aa	Predicted RBP	4.03	□□□□□ -1.76
YPT7	YML001W	RBA50	Q04418	439 aa		4.03	□□□□□ -1.76
YPT7	YML001W	RRP6	Q12149	733 aa	Known RBP	4.03	□□□□□ -1.76
YPT7	YML001W	CYB2	P00175	591 aa		4.02	□□□□□ -1.77
YPT7	YML001W	CDC43	P18898	376 aa		4.02	□□□□□ -1.77
YPT7	YML001W	CBP3	P21560	335 aa		4.02	□□□□□ -1.77
YPT7	YML001W	KIN3	P22209	435 aa		4.02	□□□□□ -1.77
YPT7	YML001W	MAK31	P23059	88 aa		4.02	□□□□□ -1.77
YPT7	YML001W	THI4	P32318	326 aa		4.02	□□□□□ -1.77
YPT7	YML001W	SPC110	P32380	944 aa		4.02	□□□□□ -1.77
YPT7	YML001W	YET1	P35723	206 aa		4.02	□□□□□ -1.77
YPT7	YML001W	APT2	P36973	181 aa		4.02	□□□□□ -1.77
YPT7	YML001W	HSL7	P38274	827 aa		4.02	□□□□□ -1.77
YPT7	YML001W	UBS1	P38290	277 aa		4.02	□□□□□ -1.77
YPT7	YML001W	CBR1	P38626	284 aa	Known RBP	4.02	□□□□□ -1.77
YPT7	YML001W	RTS1	P38903	757 aa		4.02	□□□□□ -1.77
YPT7	YML001W	DSS1	P39112	969 aa		4.02	□□□□□ -1.77
YPT7	YML001W	GET2	P40056	285 aa		4.02	□□□□□ -1.77
YPT7	YML001W	SEC9	P40357	651 aa		4.02	□□□□□ -1.77
YPT7	YML001W	NDC80	P40460	691 aa		4.02	□□□□□ -1.77
YPT7	YML001W	YFH7	P43591	353 aa		4.02	□□□□□ -1.77
YPT7	YML001W	FYV8	P46949	817 aa	Known RBP	4.02	□□□□□ -1.77
YPT7	YML001W	PCL10	P53124	433 aa		4.02	□□□□□ -1.77
YPT7	YML001W	SDA1	P53313	767 aa	Known RBP	4.02	□□□□□ -1.77
YPT7	YML001W	ALG12	P53730	551 aa		4.02	□□□□□ -1.77
YPT7	YML001W	ARP4	P80428	489 aa		4.02	□□□□□ -1.77
YPT7	YML001W	NHX1	Q04121	633 aa		4.02	□□□□□ -1.77
YPT7	YML001W	MMR1	Q06324	491 aa		4.02	□□□□□ -1.77
YPT7	YML001W	YLH47	Q06493	454 aa		4.02	□□□□□ -1.77
YPT7	YML001W	DIB1	Q06819	143 aa	Predicted RBP	4.02	□□□□□ -1.77
YPT7	YML001W	ATG9	Q12142	997 aa		4.02	□□□□□ -1.77
YPT7	YML001W	RNR3	P21672	869 aa	Known RBP	4.01	□□□□□ -1.77
YPT7	YML001W	UBC1	P21734	215 aa	Known RBP	4.01	□□□□□ -1.77
YPT7	YML001W	LCB1	P25045	558 aa	Known RBP	4.01	□□□□□ -1.77
YPT7	YML001W	MRC1	P25588	1096 aa		4.01	□□□□□ -1.77
YPT7	YML001W	MVD1	P32377	396 aa	Known RBP	4.01	□□□□□ -1.77
YPT7	YML001W	SAS3	P34218	831 aa		4.01	□□□□□ -1.77
YPT7	YML001W	RRP14	P36080	434 aa	Known RBP	4.01	□□□□□ -1.77
YPT7	YML001W	GDT1	P38301	280 aa	Predicted RBP	4.01	□□□□□ -1.77
YPT7	YML001W	SFB3	P38810	929 aa		4.01	□□□□□ -1.77
YPT7	YML001W	YJL206C	P39529	758 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 147 ms