RNA–Protein interactions for RNA: YML001W

YPT7, Transcript of Rab family GTPase, yeastyeast

Gene YPT7, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT7YML001W MTC1P47018 478 aaKnown RBP12.64□□□□□ -0.39
YPT7YML001W DRS1P32892 752 aaKnown RBP12.03□□□□□ -0.48
YPT7YML001W FAP1P53971 965 aa10.97□□□□□ -0.65
YPT7YML001W PRI1P10363 409 aa10.5□□□□□ -0.73
YPT7YML001W DIP2Q12220 943 aaPredicted RBP10.45□□□□□ -0.74
YPT7YML001W ISW2Q08773 1120 aa10.38□□□□□ -0.75
YPT7YML001W AAD16Q02895 342 aa10.37□□□□□ -0.75
YPT7YML001W PRY3P47033 881 aa10.31□□□□□ -0.76
YPT7YML001W RPG1P38249 964 aaKnown RBP10.25□□□□□ -0.77
YPT7YML001W AVT3P36062 692 aa10.21□□□□□ -0.77
YPT7YML001W BFR2Q06631 534 aaKnown RBP10.13□□□□□ -0.79
YPT7YML001W RSE1Q04693 1361 aaKnown RBP10.03□□□□□ -0.8
YPT7YML001W TSR3Q12094 313 aaKnown RBP9.89□□□□□ -0.83
YPT7YML001W YCK3P39962 524 aa9.85□□□□□ -0.83
YPT7YML001W HAA1Q12753 694 aaKnown RBP9.72□□□□□ -0.85
YPT7YML001W RPL17AP05740 184 aaKnown RBP9.69□□□□□ -0.86
YPT7YML001W RPL17BP46990 184 aaKnown RBP9.69□□□□□ -0.86
YPT7YML001W REB1P21538 810 aa9.6□□□□□ -0.87
YPT7YML001W MRPL32P25348 183 aa9.49□□□□□ -0.89
YPT7YML001W SPT21P35209 758 aa9.37□□□□□ -0.91
YPT7YML001W YKR023WP36119 530 aaKnown RBP9.17□□□□□ -0.94
YPT7YML001W TFA1P36100 482 aa9.16□□□□□ -0.94
YPT7YML001W CDC27P38042 758 aa9.12□□□□□ -0.95
YPT7YML001W RIM101P33400 625 aa9.08□□□□□ -0.96
YPT7YML001W YGL015CP33199 130 aa9.04□□□□□ -0.96
YPT7YML001W TFC8Q12308 588 aa8.98□□□□□ -0.97
YPT7YML001W HOP09932 586 aa8.94□□□□□ -0.98
YPT7YML001W DCD1P06773 312 aa8.89□□□□□ -0.99
YPT7YML001W UBP10P53874 792 aaPredicted RBP8.84□□□□□ -0.99
YPT7YML001W MAP2P38174 421 aaKnown RBP8.79□□□□□ -1
YPT7YML001W OXP1P28273 1286 aa8.77□□□□□ -1.01
YPT7YML001W BCH2P36122 765 aa8.68□□□□□ -1.02
YPT7YML001W SCY1P53009 804 aa8.65□□□□□ -1.02
YPT7YML001W PTP3P40048 928 aa8.57□□□□□ -1.04
YPT7YML001W YIL055CP40523 627 aaKnown RBP8.57□□□□□ -1.04
YPT7YML001W SLX5P32828 619 aaKnown RBP8.53□□□□□ -1.04
YPT7YML001W EPS1P40557 701 aa8.49□□□□□ -1.05
YPT7YML001W RSM7P47150 247 aa8.49□□□□□ -1.05
YPT7YML001W YAH1Q12184 172 aaKnown RBP8.49□□□□□ -1.05
YPT7YML001W BDF1P35817 686 aa8.45□□□□□ -1.06
YPT7YML001W TIF4632P39936 914 aaKnown RBP8.43□□□□□ -1.06
YPT7YML001W YLR271WQ06152 274 aa8.42□□□□□ -1.06
YPT7YML001W TGL3P40308 642 aa8.41□□□□□ -1.06
YPT7YML001W AI2P03876 854 aa8.39□□□□□ -1.07
YPT7YML001W SSP1P38871 571 aa8.37□□□□□ -1.07
YPT7YML001W BBC1P47068 1157 aa8.37□□□□□ -1.07
YPT7YML001W PSD2P53037 1138 aaKnown RBP8.29□□□□□ -1.08
YPT7YML001W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.27□□□□□ -1.09not detected
YPT7YML001W BUD31P25337 157 aaPredicted RBP8.2□□□□□ -1.1
YPT7YML001W NSR1P27476 414 aaKnown RBP RIP-Chip data8.2□□□□□ -1.1not detected
YPT7YML001W MGA2P40578 1113 aa8.14□□□□□ -1.11
YPT7YML001W MST1P07236 462 aa8.13□□□□□ -1.11
YPT7YML001W CST9Q06032 482 aa8.13□□□□□ -1.11
YPT7YML001W MRM1P25270 412 aa8.09□□□□□ -1.11
YPT7YML001W YAP5P40574 245 aa8.07□□□□□ -1.12
YPT7YML001W YOR238WQ08634 303 aa8.07□□□□□ -1.12
YPT7YML001W UBP9P39967 754 aa8.04□□□□□ -1.12
YPT7YML001W RTG3P38165 486 aa7.94□□□□□ -1.14
YPT7YML001W VPS29P38759 282 aa7.94□□□□□ -1.14
YPT7YML001W RCR1P38212 213 aa7.92□□□□□ -1.14
YPT7YML001W YBL029C-AQ3E756 94 aa7.91□□□□□ -1.14
YPT7YML001W YMR1P47147 688 aaKnown RBP RIP-Chip data7.9□□□□□ -1.14not detected
YPT7YML001W PIB1Q06651 286 aa7.87□□□□□ -1.15
YPT7YML001W STS1P38637 319 aa7.86□□□□□ -1.15
YPT7YML001W DBP1P24784 617 aaKnown RBP7.85□□□□□ -1.15
YPT7YML001W GTT3P39996 337 aa7.85□□□□□ -1.15
YPT7YML001W VNX1P42839 908 aa7.85□□□□□ -1.15
YPT7YML001W YFR006WP43590 535 aa7.81□□□□□ -1.16
YPT7YML001W WSC3Q12215 556 aa7.8□□□□□ -1.16
YPT7YML001W SIS1P25294 352 aaKnown RBP7.78□□□□□ -1.16
YPT7YML001W VMA1P17255 1071 aaKnown RBP7.77□□□□□ -1.17
YPT7YML001W RAM2P29703 316 aa7.77□□□□□ -1.17
YPT7YML001W SPP1Q03012 353 aa7.75□□□□□ -1.17
YPT7YML001W TIF11P38912 153 aaKnown RBP7.74□□□□□ -1.17
YPT7YML001W SAM3Q08986 587 aa7.74□□□□□ -1.17
YPT7YML001W MSB4Q12317 492 aa7.73□□□□□ -1.17
YPT7YML001W MAK11P20484 414 aaKnown RBP7.71□□□□□ -1.18
YPT7YML001W YOL036WQ08206 761 aa7.71□□□□□ -1.18
YPT7YML001W SET4P42948 560 aa7.66□□□□□ -1.18
YPT7YML001W ULI1P43604 169 aa7.65□□□□□ -1.18
YPT7YML001W IOC2Q12072 812 aa7.65□□□□□ -1.18
YPT7YML001W EAP1P36041 632 aaKnown RBP7.64□□□□□ -1.19
YPT7YML001W FKH1P40466 484 aa7.62□□□□□ -1.19
YPT7YML001W EDS1P38073 919 aa7.61□□□□□ -1.19
YPT7YML001W LDB19Q12502 818 aa7.6□□□□□ -1.19
YPT7YML001W TRP5P00931 707 aaKnown RBP7.59□□□□□ -1.19
YPT7YML001W ABP1P15891 592 aaKnown RBP7.59□□□□□ -1.19
YPT7YML001W GYP5Q12344 894 aa7.59□□□□□ -1.19
YPT7YML001W COQ8P27697 501 aa7.58□□□□□ -1.2
YPT7YML001W MIF2P35201 549 aa7.58□□□□□ -1.2
YPT7YML001W AIR2Q12476 344 aaKnown RBP7.57□□□□□ -1.2
YPT7YML001W PTC3P34221 468 aaKnown RBP7.55□□□□□ -1.2
YPT7YML001W GRE2Q12068 342 aaKnown RBP7.53□□□□□ -1.2
YPT7YML001W HTA1P04911 132 aaKnown RBP7.52□□□□□ -1.21
YPT7YML001W HTA2P04912 132 aa7.52□□□□□ -1.21
YPT7YML001W DCW1P36091 449 aa7.51□□□□□ -1.21
YPT7YML001W YNL035CP53962 389 aaKnown RBP7.51□□□□□ -1.21
YPT7YML001W NOP53Q12080 455 aaKnown RBP7.51□□□□□ -1.21
YPT7YML001W RTG1P32607 177 aa7.5□□□□□ -1.21
YPT7YML001W GUT1P32190 709 aa7.48□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms