RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W SSK22P25390 1331 aaPredicted RBP5.99□□□□□ -1.45
VMS1YDR049W ADE3P07245 946 aaKnown RBP5.98□□□□□ -1.45
VMS1YDR049W ADE2P21264 571 aaKnown RBP5.98□□□□□ -1.45
VMS1YDR049W SEC65P29478 273 aa5.98□□□□□ -1.45
VMS1YDR049W SRB2P34162 210 aa5.98□□□□□ -1.45
VMS1YDR049W SET3P36124 751 aa5.98□□□□□ -1.45
VMS1YDR049W MMS4P38257 691 aa5.98□□□□□ -1.45
VMS1YDR049W SHU2P38957 223 aa5.98□□□□□ -1.45
VMS1YDR049W LYS9P38999 446 aa5.98□□□□□ -1.45
VMS1YDR049W PSD1P39006 500 aa5.98□□□□□ -1.45
VMS1YDR049W STT3P39007 718 aaKnown RBP5.98□□□□□ -1.45
VMS1YDR049W PRM2P40534 656 aa5.98□□□□□ -1.45
VMS1YDR049W PAN2P53010 1115 aaPredicted RBP5.98□□□□□ -1.45
VMS1YDR049W PDR16P53860 351 aaKnown RBP5.98□□□□□ -1.45
VMS1YDR049W YNL165WP53891 406 aa5.98□□□□□ -1.45
VMS1YDR049W WTM2Q12206 467 aa5.98□□□□□ -1.45
VMS1YDR049W GAL7P08431 366 aa5.98□□□□□ -1.45
VMS1YDR049W SUI3P09064 285 aaKnown RBP5.98□□□□□ -1.45
VMS1YDR049W PWP1P21304 576 aaKnown RBP5.98□□□□□ -1.45
VMS1YDR049W AFT1P22149 690 aa5.98□□□□□ -1.45
VMS1YDR049W CAD1P24813 409 aaKnown RBP5.98□□□□□ -1.45
VMS1YDR049W PRD1P25375 712 aa5.98□□□□□ -1.45
VMS1YDR049W MLF3P32047 452 aa5.98□□□□□ -1.45
VMS1YDR049W REC104P33323 182 aa5.98□□□□□ -1.45
VMS1YDR049W CTF13P35203 478 aa5.98□□□□□ -1.45
VMS1YDR049W UBP11P36026 717 aa5.98□□□□□ -1.45
VMS1YDR049W SAP190P36123 1033 aa5.98□□□□□ -1.45
VMS1YDR049W PXL1P36166 706 aa5.98□□□□□ -1.45
VMS1YDR049W YBR138CP38277 524 aa5.98□□□□□ -1.45
VMS1YDR049W MSG5P38590 489 aa5.98□□□□□ -1.45
VMS1YDR049W MUP3P38734 546 aa5.98□□□□□ -1.45
VMS1YDR049W RPN10P38886 268 aaKnown RBP5.98□□□□□ -1.45
VMS1YDR049W GIP4P39732 760 aa5.98□□□□□ -1.45
VMS1YDR049W HNT2P49775 206 aa5.98□□□□□ -1.45
VMS1YDR049W UBC9P50623 157 aaPredicted RBP5.98□□□□□ -1.45
VMS1YDR049W CGR1P53188 120 aa5.98□□□□□ -1.45
VMS1YDR049W MAK10Q02197 733 aa5.98□□□□□ -1.45
VMS1YDR049W YOR296WQ08748 1289 aa5.98□□□□□ -1.45
VMS1YDR049W HSL1P34244 1518 aa5.98□□□□□ -1.45
VMS1YDR049W TDH1P00360 332 aaKnown RBP5.97□□□□□ -1.45
VMS1YDR049W CAR2P07991 424 aaKnown RBP5.97□□□□□ -1.45
VMS1YDR049W URA7P28274 579 aaKnown RBP5.97□□□□□ -1.45
VMS1YDR049W MRPL36P36531 177 aa5.97□□□□□ -1.45
VMS1YDR049W YHL017WP38745 532 aa5.97□□□□□ -1.45
VMS1YDR049W YJR061WP40355 935 aa5.97□□□□□ -1.45
VMS1YDR049W LCL3P53153 274 aa5.97□□□□□ -1.45
VMS1YDR049W RTC4P53850 401 aa5.97□□□□□ -1.45
VMS1YDR049W YNL144CP53907 740 aa5.97□□□□□ -1.45
VMS1YDR049W YDR514CQ04408 483 aa5.97□□□□□ -1.45
VMS1YDR049W RPN5Q12250 445 aaKnown RBP5.97□□□□□ -1.45
VMS1YDR049W GLE1Q12315 538 aa5.97□□□□□ -1.45
VMS1YDR049W PRP6P19735 899 aaPredicted RBP5.96□□□□□ -1.45
VMS1YDR049W TRK2P28584 889 aa5.96□□□□□ -1.45
VMS1YDR049W NAB2P32505 525 aaKnown RBP RIP-Chip data5.96□□□□□ -1.45 RIP-Chip
VMS1YDR049W SRB4P32569 687 aa5.96□□□□□ -1.45
VMS1YDR049W SRP101P32916 621 aa5.96□□□□□ -1.45
VMS1YDR049W RFC3P38629 340 aa5.96□□□□□ -1.45
VMS1YDR049W UTP7P40055 554 aaKnown RBP5.96□□□□□ -1.45
VMS1YDR049W AAD14P42884 376 aa5.96□□□□□ -1.45
VMS1YDR049W YSA1Q01976 231 aa5.96□□□□□ -1.45
VMS1YDR049W EFR3Q03653 782 aaKnown RBP5.96□□□□□ -1.45
VMS1YDR049W FMP45Q07651 309 aa5.96□□□□□ -1.45
VMS1YDR049W BUD20Q08004 166 aaPredicted RBP5.96□□□□□ -1.45
VMS1YDR049W AHC1Q12433 566 aa5.96□□□□□ -1.45
VMS1YDR049W YBR126W-AQ8TGU7 68 aa5.96□□□□□ -1.45
VMS1YDR049W YRF1-4O13559 1382 aa5.96□□□□□ -1.46
VMS1YDR049W CLB3P24870 427 aa5.96□□□□□ -1.46
VMS1YDR049W ITR1P30605 584 aa5.96□□□□□ -1.46
VMS1YDR049W MGM101P32787 269 aaKnown RBP5.96□□□□□ -1.46
VMS1YDR049W RPT5P33297 434 aaKnown RBP5.96□□□□□ -1.46
VMS1YDR049W PHO11P35842 467 aa5.96□□□□□ -1.46
VMS1YDR049W GPT2P36148 743 aa5.96□□□□□ -1.46
VMS1YDR049W YSW1P38280 609 aa5.96□□□□□ -1.46
VMS1YDR049W PHO12P38693 467 aa5.96□□□□□ -1.46
VMS1YDR049W SMF1P38925 575 aa5.96□□□□□ -1.46
VMS1YDR049W YHB1P39676 399 aaKnown RBP5.96□□□□□ -1.46
VMS1YDR049W YIL077CP40508 320 aa5.96□□□□□ -1.46
VMS1YDR049W LOC1P43586 204 aaPredicted RBP5.96□□□□□ -1.46
VMS1YDR049W GPD1Q00055 391 aaKnown RBP5.96□□□□□ -1.46
VMS1YDR049W UBP2Q01476 1272 aa5.96□□□□□ -1.46
VMS1YDR049W SKG3Q06315 1026 aa5.96□□□□□ -1.46
VMS1YDR049W IWR1Q07532 353 aaPredicted RBP5.96□□□□□ -1.46
VMS1YDR049W ENV7Q12003 364 aa5.96□□□□□ -1.46
VMS1YDR049W CET1O13297 549 aaPredicted RBP5.95□□□□□ -1.46
VMS1YDR049W RPC31P17890 251 aa5.95□□□□□ -1.46
VMS1YDR049W ACO1P19414 778 aaKnown RBP RIP-Chip data5.95□□□□□ -1.46not detected
VMS1YDR049W CPR2P23285 205 aa5.95□□□□□ -1.46
VMS1YDR049W STE11P23561 717 aa5.95□□□□□ -1.46
VMS1YDR049W PEP3P27801 918 aa5.95□□□□□ -1.46
VMS1YDR049W CAP1P28495 268 aaKnown RBP5.95□□□□□ -1.46
VMS1YDR049W MSN4P33749 630 aa5.95□□□□□ -1.46
VMS1YDR049W YKL023WP36103 277 aaKnown RBP5.95□□□□□ -1.46
VMS1YDR049W EXO5P38289 585 aa5.95□□□□□ -1.46
VMS1YDR049W NTC20P38302 140 aaPredicted RBP5.95□□□□□ -1.46
VMS1YDR049W SRP68P38687 599 aaKnown RBP5.95□□□□□ -1.46
VMS1YDR049W STN1P38960 494 aa5.95□□□□□ -1.46
VMS1YDR049W IRC5P43610 853 aa5.95□□□□□ -1.46
VMS1YDR049W ALK1P43633 760 aaKnown RBP5.95□□□□□ -1.46
VMS1YDR049W PSP1P50896 841 aaKnown RBP5.95□□□□□ -1.46
VMS1YDR049W BRE5P53741 515 aaKnown RBP5.95□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms