RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeast

Gene CMD1, Length 444 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMD1	YBR109C	HOP1	P20050	605 aa		3.8	□□□□□ -1.8
CMD1	YBR109C	SEC15	P22224	910 aa		3.8	□□□□□ -1.8
CMD1	YBR109C	COS111	P38308	924 aa		3.8	□□□□□ -1.8
CMD1	YBR109C	SFB3	P38810	929 aa		3.8	□□□□□ -1.8
CMD1	YBR109C	PIG2	P40187	538 aa		3.8	□□□□□ -1.8
CMD1	YBR109C	PUS4	P48567	403 aa	Known RBP	3.8	□□□□□ -1.8
CMD1	YBR109C	RFX1	P48743	811 aa		3.8	□□□□□ -1.8
CMD1	YBR109C	PEF1	P53238	335 aa		3.8	□□□□□ -1.8
CMD1	YBR109C	YNL050C	P53952	270 aa		3.8	□□□□□ -1.8
CMD1	YBR109C	HEF3	P53978	1044 aa	Known RBP	3.8	□□□□□ -1.8
CMD1	YBR109C	YFT2	Q06676	274 aa		3.8	□□□□□ -1.8
CMD1	YBR109C	YOL073C	Q08232	322 aa		3.8	□□□□□ -1.8
CMD1	YBR109C	RTK1	Q12100	620 aa	Predicted RBP	3.8	□□□□□ -1.8
CMD1	YBR109C	RRP6	Q12149	733 aa	Known RBP	3.8	□□□□□ -1.8
CMD1	YBR109C	ZRT2	Q12436	422 aa		3.8	□□□□□ -1.8
CMD1	YBR109C	YKL033W-A	Q86ZR7	236 aa		3.8	□□□□□ -1.8
CMD1	YBR109C	HMG2	P12684	1045 aa		3.79	□□□□□ -1.8
CMD1	YBR109C	TUP1	P16649	713 aa		3.79	□□□□□ -1.8
CMD1	YBR109C	PHO3	P24031	467 aa		3.79	□□□□□ -1.8
CMD1	YBR109C	MSP1	P28737	362 aa		3.79	□□□□□ -1.8
CMD1	YBR109C	RMA1	P36001	430 aa	Known RBP	3.79	□□□□□ -1.8
CMD1	YBR109C	PPS1	P38148	807 aa		3.79	□□□□□ -1.8
CMD1	YBR109C	CRG1	P38892	291 aa	RIP-Chip data	3.79	□□□□□ -1.8	not detected
CMD1	YBR109C	REV7	P38927	245 aa		3.79	□□□□□ -1.8
CMD1	YBR109C	FTR1	P40088	404 aa		3.79	□□□□□ -1.8
CMD1	YBR109C	MAD2	P40958	196 aa		3.79	□□□□□ -1.8
CMD1	YBR109C	ASK10	P48361	1146 aa		3.79	□□□□□ -1.8
CMD1	YBR109C	MNT2	P53059	558 aa		3.79	□□□□□ -1.8
CMD1	YBR109C	RRP46	P53256	223 aa	Predicted RBP	3.79	□□□□□ -1.8
CMD1	YBR109C	UBX4	P54730	416 aa		3.79	□□□□□ -1.8
CMD1	YBR109C	CHS5	Q12114	671 aa	Known RBP	3.79	□□□□□ -1.8
CMD1	YBR109C	PSF3	Q12146	194 aa		3.79	□□□□□ -1.8
CMD1	YBR109C	VPS5	Q92331	675 aa		3.79	□□□□□ -1.8
CMD1	YBR109C	APC1	P53886	1748 aa		3.78	□□□□□ -1.8
CMD1	YBR109C	TPM1	P17536	199 aa	Known RBP	3.78	□□□□□ -1.8
CMD1	YBR109C	PRP28	P23394	588 aa		3.78	□□□□□ -1.8
CMD1	YBR109C	MSS1	P32559	526 aa	Predicted RBP	3.78	□□□□□ -1.8
CMD1	YBR109C	TGL1	P34163	548 aa		3.78	□□□□□ -1.8
CMD1	YBR109C	PHO11	P35842	467 aa		3.78	□□□□□ -1.8
CMD1	YBR109C	PHO12	P38693	467 aa		3.78	□□□□□ -1.8
CMD1	YBR109C	RIM4	P38741	713 aa		3.78	□□□□□ -1.8
CMD1	YBR109C	PMC1	P38929	1173 aa	Predicted RBP	3.78	□□□□□ -1.8
CMD1	YBR109C	SAW1	P39735	261 aa		3.78	□□□□□ -1.8
CMD1	YBR109C	SSP120	P39931	234 aa	Known RBP	3.78	□□□□□ -1.8
CMD1	YBR109C	SCS2	P40075	244 aa	Known RBP	3.78	□□□□□ -1.8
CMD1	YBR109C	HIS6	P40545	261 aa		3.78	□□□□□ -1.8
CMD1	YBR109C	QRI1	P43123	477 aa	Known RBP	3.78	□□□□□ -1.8
CMD1	YBR109C	YDL183C	P48569	320 aa		3.78	□□□□□ -1.8
CMD1	YBR109C	TEL2	P53038	688 aa		3.78	□□□□□ -1.8
CMD1	YBR109C	FHN1	P53279	174 aa		3.78	□□□□□ -1.8
CMD1	YBR109C	FDC1	Q03034	503 aa		3.78	□□□□□ -1.8
CMD1	YBR109C	HLR1	Q04429	423 aa		3.78	□□□□□ -1.8
CMD1	YBR109C	YCG1	Q06680	1035 aa		3.78	□□□□□ -1.8
CMD1	YBR109C	RTT109	Q07794	436 aa		3.78	□□□□□ -1.8
CMD1	YBR109C	MLH3	Q12083	715 aa		3.78	□□□□□ -1.8
CMD1	YBR109C	DIN7	Q12086	430 aa		3.78	□□□□□ -1.8
CMD1	YBR109C	CLF1	Q12309	687 aa	Predicted RBP	3.78	□□□□□ -1.8
CMD1	YBR109C	YOL114C	Q12322	202 aa		3.78	□□□□□ -1.8
CMD1	YBR109C	TY1B-NL2	Q99337	1749 aa	Known RBP	3.78	□□□□□ -1.8
CMD1	YBR109C	MSS18	P08593	268 aa		3.77	□□□□□ -1.81
CMD1	YBR109C	PGI1	P12709	554 aa	Known RBP	3.77	□□□□□ -1.81
CMD1	YBR109C	THR1	P17423	357 aa	Known RBP	3.77	□□□□□ -1.81
CMD1	YBR109C	CWH43	P25618	953 aa		3.77	□□□□□ -1.81
CMD1	YBR109C	SDS22	P36047	338 aa		3.77	□□□□□ -1.81
CMD1	YBR109C	YHL041W	P38730	149 aa		3.77	□□□□□ -1.81
CMD1	YBR109C	YNG2	P38806	282 aa	Known RBP	3.77	□□□□□ -1.81
CMD1	YBR109C	RSM25	P40496	264 aa		3.77	□□□□□ -1.81
CMD1	YBR109C	QRI7	P43122	407 aa		3.77	□□□□□ -1.81
CMD1	YBR109C	MPS3	P47069	682 aa		3.77	□□□□□ -1.81
CMD1	YBR109C	TAN1	P53072	289 aa	Predicted RBP	3.77	□□□□□ -1.81
CMD1	YBR109C	PIL1	P53252	339 aa	Known RBP	3.77	□□□□□ -1.81
CMD1	YBR109C	YAP1802	P53309	568 aa		3.77	□□□□□ -1.81
CMD1	YBR109C	SQS1	P53866	767 aa	Known RBP	3.77	□□□□□ -1.81
CMD1	YBR109C	TIM50	Q02776	476 aa		3.77	□□□□□ -1.81
CMD1	YBR109C	HIM1	Q06674	414 aa		3.77	□□□□□ -1.81
CMD1	YBR109C	BRE1	Q07457	700 aa	Known RBP	3.77	□□□□□ -1.81
CMD1	YBR109C	ETT1	Q08421	412 aa	Known RBP	3.77	□□□□□ -1.81
CMD1	YBR109C	ARP7	Q12406	477 aa		3.77	□□□□□ -1.81
CMD1	YBR109C	URA3	P03962	267 aa		3.76	□□□□□ -1.81
CMD1	YBR109C	RNR2	P09938	399 aa	Known RBP	3.76	□□□□□ -1.81
CMD1	YBR109C	ADH4	P10127	382 aa		3.76	□□□□□ -1.81
CMD1	YBR109C	EHT1	P38295	451 aa		3.76	□□□□□ -1.81
CMD1	YBR109C	RFC1	P38630	861 aa	Known RBP	3.76	□□□□□ -1.81
CMD1	YBR109C	TMN3	P40071	706 aa		3.76	□□□□□ -1.81
CMD1	YBR109C	TAH11	P47112	604 aa		3.76	□□□□□ -1.81
CMD1	YBR109C	YNR071C	P53757	342 aa		3.76	□□□□□ -1.81
CMD1	YBR109C	MAK10	Q02197	733 aa		3.76	□□□□□ -1.81
CMD1	YBR109C	AIM41	Q12032	185 aa		3.76	□□□□□ -1.81
CMD1	YBR109C	DBP10	Q12389	995 aa	Known RBP	3.76	□□□□□ -1.81
CMD1	YBR109C	NOP58	Q12499	511 aa	Known RBP	3.76	□□□□□ -1.81
CMD1	YBR109C	LYS2	P07702	1392 aa		3.76	□□□□□ -1.81
CMD1	YBR109C	ADE6	P38972	1358 aa	Known RBP	3.76	□□□□□ -1.81
CMD1	YBR109C	AUS1	Q08409	1394 aa		3.76	□□□□□ -1.81
CMD1	YBR109C	RPS19A	P07280	144 aa	Known RBP	3.75	□□□□□ -1.81
CMD1	YBR109C	RPS19B	P07281	144 aa	Predicted RBP	3.75	□□□□□ -1.81
CMD1	YBR109C	VAS1	P07806	1104 aa	Known RBP	3.75	□□□□□ -1.81
CMD1	YBR109C	RPS24A	P0CX31	135 aa	Known RBP	3.75	□□□□□ -1.81
CMD1	YBR109C	RPS24B	P0CX32	135 aa	Known RBP	3.75	□□□□□ -1.81
CMD1	YBR109C	APA1	P16550	321 aa	Known RBP	3.75	□□□□□ -1.81
CMD1	YBR109C	CBP3	P21560	335 aa		3.75	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 99.1 ms