RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 YJL171CP46992 396 aa6.99□□□□□ -1.29
snR54snR54 GUT1P32190 709 aa6.98□□□□□ -1.29
snR54snR54 DAN4P47179 1161 aa6.98□□□□□ -1.29
snR54snR54 SEC61P32915 480 aa6.97□□□□□ -1.29
snR54snR54 NCR1Q12200 1170 aa6.97□□□□□ -1.29
snR54snR54 SET1P38827 1080 aaKnown RBP6.96□□□□□ -1.3
snR54snR54 JIP4Q03361 876 aa6.96□□□□□ -1.3
snR54snR54 PTC4P38089 393 aa6.94□□□□□ -1.3
snR54snR54 SOL3P38858 249 aa6.94□□□□□ -1.3
snR54snR54 BMT6Q12291 365 aa6.94□□□□□ -1.3
snR54snR54 NST1P53935 1240 aa6.93□□□□□ -1.3
snR54snR54 NOP53Q12080 455 aaKnown RBP6.92□□□□□ -1.3
snR54snR54 TFG1P41895 735 aaPredicted RBP6.9□□□□□ -1.3
snR54snR54 SAP30P38429 201 aa6.88□□□□□ -1.31
snR54snR54 ILV3P39522 585 aaKnown RBP6.87□□□□□ -1.31
snR54snR54 YGR273CP53329 174 aa6.87□□□□□ -1.31
snR54snR54 YDL129WQ07555 291 aa6.86□□□□□ -1.31
snR54snR54 PML39Q03760 334 aa6.85□□□□□ -1.31
snR54snR54 DMA1P38823 416 aa6.84□□□□□ -1.31
snR54snR54 AI4P03878 556 aa6.83□□□□□ -1.32
snR54snR54 MPH3P0CE00 602 aa6.83□□□□□ -1.32
snR54snR54 MID1P41821 548 aa6.82□□□□□ -1.32
snR54snR54 YDR344CQ05510 147 aa6.81□□□□□ -1.32
snR54snR54 VHR2P40041 505 aa6.77□□□□□ -1.33
snR54snR54 KEX1P09620 729 aa6.76□□□□□ -1.33
snR54snR54 IFH1P39520 1085 aa6.76□□□□□ -1.33
snR54snR54 YPR148CQ06523 435 aa6.76□□□□□ -1.33
snR54snR54 YLR326WQ06170 240 aaKnown RBP6.75□□□□□ -1.33
snR54snR54 UBP14P38237 781 aaKnown RBP6.74□□□□□ -1.33
snR54snR54 SLI15P38283 698 aa6.74□□□□□ -1.33
snR54snR54 VPS70P47161 811 aa6.74□□□□□ -1.33
snR54snR54 PRE3P38624 215 aa6.73□□□□□ -1.33
snR54snR54 PEX29Q03370 554 aa6.73□□□□□ -1.33
snR54snR54 CHL1P22516 861 aaPredicted RBP6.7□□□□□ -1.34
snR54snR54 ELP4Q02884 456 aaKnown RBP6.7□□□□□ -1.34
snR54snR54 PCS60P38137 543 aaKnown RBP RIP-Chip data6.69□□□□□ -1.34not detected
snR54snR54 MPC54Q08550 464 aa6.69□□□□□ -1.34
snR54snR54 ARH1P48360 493 aa6.68□□□□□ -1.34
snR54snR54 YDR090CQ03193 310 aa6.68□□□□□ -1.34
snR54snR54 RAD54P32863 898 aa6.67□□□□□ -1.34
snR54snR54 REF2P42073 533 aaPredicted RBP6.66□□□□□ -1.34
snR54snR54 CDC73Q06697 393 aa6.65□□□□□ -1.34
snR54snR54 DPL1Q05567 589 aa6.64□□□□□ -1.35
snR54snR54 HAP5Q02516 242 aa6.63□□□□□ -1.35
snR54snR54 NMA111P53920 997 aa6.62□□□□□ -1.35
snR54snR54 SAS10Q12136 610 aaPredicted RBP6.62□□□□□ -1.35
snR54snR54 KIC1P38692 1080 aa6.61□□□□□ -1.35
snR54snR54 BCK2P33306 851 aa6.6□□□□□ -1.35
snR54snR54 SPT23P35210 1082 aa6.59□□□□□ -1.35
snR54snR54 VRP1P37370 817 aa6.57□□□□□ -1.36
snR54snR54 BNI4P53858 892 aa6.57□□□□□ -1.36
snR54snR54 COX6P00427 148 aa6.56□□□□□ -1.36
snR54snR54 CKB1P43639 278 aa6.56□□□□□ -1.36
snR54snR54 PBS2P08018 668 aa6.55□□□□□ -1.36
snR54snR54 ISU2Q12056 156 aa6.55□□□□□ -1.36
snR54snR54 PTC2P39966 464 aaKnown RBP6.54□□□□□ -1.36
snR54snR54 MAK21Q12176 1025 aaKnown RBP6.54□□□□□ -1.36
snR54snR54 ORC6P38826 435 aa6.53□□□□□ -1.36
snR54snR54 YPR015CQ12531 247 aa6.52□□□□□ -1.37
snR54snR54 RPP1BP10622 106 aaKnown RBP6.51□□□□□ -1.37
snR54snR54 PDR1P12383 1068 aa6.51□□□□□ -1.37
snR54snR54 GAP1P19145 602 aaPredicted RBP6.5□□□□□ -1.37
snR54snR54 RAM1P22007 431 aa6.5□□□□□ -1.37
snR54snR54 YML082WQ04533 649 aaKnown RBP6.5□□□□□ -1.37
snR54snR54 RQC2Q12532 1038 aaKnown RBP6.5□□□□□ -1.37
snR54snR54 PEX21P50091 288 aa6.47□□□□□ -1.37
snR54snR54 CSC1Q06538 782 aa6.47□□□□□ -1.37
snR54snR54 YRR1Q12172 810 aa6.47□□□□□ -1.37
snR54snR54 DSF2P38213 736 aa6.46□□□□□ -1.38
snR54snR54 XDJ1P39102 459 aa6.46□□□□□ -1.38
snR54snR54 MAM3Q12296 706 aa6.46□□□□□ -1.38
snR54snR54 SPB4P25808 606 aaPredicted RBP6.45□□□□□ -1.38
snR54snR54 IES2P40154 320 aa6.45□□□□□ -1.38
snR54snR54 TUM1Q08686 304 aaKnown RBP6.45□□□□□ -1.38
snR54snR54 TFB4Q12004 338 aa6.44□□□□□ -1.38
snR54snR54 MVP1P40959 511 aaKnown RBP6.43□□□□□ -1.38
snR54snR54 RGR1P19263 1082 aa6.41□□□□□ -1.38
snR54snR54 STR2P47164 639 aa6.4□□□□□ -1.38
snR54snR54 NUD1P32336 851 aa6.39□□□□□ -1.39
snR54snR54 NUP42P49686 430 aaKnown RBP6.39□□□□□ -1.39
snR54snR54 YPR109WQ06104 294 aa6.39□□□□□ -1.39
snR54snR54 ISM1P48526 1002 aa6.38□□□□□ -1.39
snR54snR54 PSE1P32337 1089 aaKnown RBP6.37□□□□□ -1.39
snR54snR54 BUD20Q08004 166 aaPredicted RBP6.37□□□□□ -1.39
snR54snR54 GYP1Q08484 637 aa6.37□□□□□ -1.39
snR54snR54 DIT2P21595 489 aa6.36□□□□□ -1.39
snR54snR54 DPS1P04802 557 aaKnown RBP6.34□□□□□ -1.39
snR54snR54 TY1A-DR4O74302 440 aa6.32□□□□□ -1.4
snR54snR54 TY1A-HP0C2I4 478 aaKnown RBP6.32□□□□□ -1.4
snR54snR54 TY1A-AP0CX57 440 aa6.32□□□□□ -1.4
snR54snR54 TY1A-PR1P0CX58 440 aa6.32□□□□□ -1.4
snR54snR54 TY1A-ORP0CX59 440 aa6.32□□□□□ -1.4
snR54snR54 TY1A-PR2P0CX60 440 aa6.32□□□□□ -1.4
snR54snR54 TY1A-DR5P0CX65 440 aa6.32□□□□□ -1.4
snR54snR54 TY1A-ER2P0CX66 440 aa6.32□□□□□ -1.4
snR54snR54 TY1A-GR3P0CX67 440 aa6.32□□□□□ -1.4
snR54snR54 TY1A-LR1P0CX68 440 aa6.32□□□□□ -1.4
snR54snR54 TY1A-MR2P0CX69 440 aa6.32□□□□□ -1.4
snR54snR54 SDH2P21801 266 aa6.32□□□□□ -1.4
snR54snR54 NPL4P33755 580 aa6.32□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms